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Volume 38, Issue suppl_1, 1 January 2010
Database issue
Articles
The 2010 Nucleic Acids Research Database Issue and online Database Collection: a community of data resources
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D1–D4, https://doi.org/10.1093/nar/gkp1077
Database resources of the National Center for Biotechnology Information
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D5–D16, https://doi.org/10.1093/nar/gkp967
The European Bioinformatics Institute's data resources
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D17–D25, https://doi.org/10.1093/nar/gkp986
NBRP databases: databases of biological resources in Japan
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D26–D32, https://doi.org/10.1093/nar/gkp996
DDBJ launches a new archive database with analytical tools for next-generation sequence data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D33–D38, https://doi.org/10.1093/nar/gkp847
Improvements to services at the European Nucleotide Archive
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D39–D45, https://doi.org/10.1093/nar/gkp998
GenBank
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D46–D51, https://doi.org/10.1093/nar/gkp1024
Non-redundant patent sequence databases with value-added annotations at two levels
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D52–D56, https://doi.org/10.1093/nar/gkp960
ACLAME: A CLAssification of Mobile genetic Elements, update 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D57–D61, https://doi.org/10.1093/nar/gkp938
ISbrowser: an extension of ISfinder for visualizing insertion sequences in prokaryotic genomes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D62–D68, https://doi.org/10.1093/nar/gkp947
Recode-2: new design, new search tools, and many more genes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D69–D74, https://doi.org/10.1093/nar/gkp788
UTRdb and UTRsite (RELEASE 2010): a collection of sequences and regulatory motifs of the untranslated regions of eukaryotic mRNAs
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D75–D80, https://doi.org/10.1093/nar/gkp902
ChimerDB 2.0—a knowledgebase for fusion genes updated
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D81–D85, https://doi.org/10.1093/nar/gkp982
H-DBAS: human-transcriptome database for alternative splicing: update 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D86–D90, https://doi.org/10.1093/nar/gkp984
3D-footprint: a database for the structural analysis of protein–DNA complexes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D91–D97, https://doi.org/10.1093/nar/gkp781
DBTSS provides a tissue specific dynamic view of Transcription Start Sites
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D98–D104, https://doi.org/10.1093/nar/gkp1017
JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D105–D110, https://doi.org/10.1093/nar/gkp950
RegPrecise: a database of curated genomic inferences of transcriptional regulatory interactions in prokaryotes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D111–D118, https://doi.org/10.1093/nar/gkp894
TransmiR: a transcription factor–microRNA regulation database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D119–D122, https://doi.org/10.1093/nar/gkp803
deepBase: a database for deeply annotating and mining deep sequencing data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D123–D130, https://doi.org/10.1093/nar/gkp943
IRESite—a tool for the examination of viral and cellular internal ribosome entry sites
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D131–D136, https://doi.org/10.1093/nar/gkp981
miRGen 2.0: a database of microRNA genomic information and regulation
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D137–D141, https://doi.org/10.1093/nar/gkp888
The Universal Protein Resource (UniProt) in 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D142–D148, https://doi.org/10.1093/nar/gkp846
HHMD: the human histone modification database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D149–D154, https://doi.org/10.1093/nar/gkp968
MiCroKit 3.0: an integrated database of midbody, centrosome and kinetochore
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D155–D160, https://doi.org/10.1093/nar/gkp784
PROSITE, a protein domain database for functional characterization and annotation
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D161–D166, https://doi.org/10.1093/nar/gkp885
ELM: the status of the 2010 eukaryotic linear motif resource
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D167–D180, https://doi.org/10.1093/nar/gkp1016
MeMotif: a database of linear motifs in α-helical transmembrane proteins
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D181–D189, https://doi.org/10.1093/nar/gkp1042
eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotations
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D190–D195, https://doi.org/10.1093/nar/gkp951
InParanoid 7: new algorithms and tools for eukaryotic orthology analysis
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D196–D203, https://doi.org/10.1093/nar/gkp931
PANTHER version 7: improved phylogenetic trees, orthologs and collaboration with the Gene Ontology Consortium
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D204–D210, https://doi.org/10.1093/nar/gkp1019
The Pfam protein families database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D211–D222, https://doi.org/10.1093/nar/gkp985
SIMAP—a comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D223–D226, https://doi.org/10.1093/nar/gkp949
MEROPS: the peptidase database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D227–D233, https://doi.org/10.1093/nar/gkp971
REBASE—a database for DNA restriction and modification: enzymes, genes and genomes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D234–D236, https://doi.org/10.1093/nar/gkp874
SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D237–D243, https://doi.org/10.1093/nar/gkp970
FunSimMat update: new features for exploring functional similarity
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D244–D248, https://doi.org/10.1093/nar/gkp979
Chemical Entities of Biological Interest: an update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D249–D254, https://doi.org/10.1093/nar/gkp886
An overview of the PubChem BioAssay resource
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D255–D266, https://doi.org/10.1093/nar/gkp965
3DNALandscapes: a database for exploring the conformational features of DNA
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D267–D274, https://doi.org/10.1093/nar/gkp959
The ITS2 Database III—sequences and structures for phylogeny
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D275–D279, https://doi.org/10.1093/nar/gkp966
NNDB: the nearest neighbor parameter database for predicting stability of nucleic acid secondary structure
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D280–D282, https://doi.org/10.1093/nar/gkp892
ComSin: database of protein structures in bound (complex) and unbound (single) states in relation to their intrinsic disorder
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D283–D287, https://doi.org/10.1093/nar/gkp963
fPOP: footprinting functional pockets of proteins by comparative spatial patterns
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D288–D295, https://doi.org/10.1093/nar/gkp900
Gene3D: merging structure and function for a Thousand genomes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D296–D300, https://doi.org/10.1093/nar/gkp987
IMGT/3Dstructure-DB and IMGT/DomainGapAlign: a database and a tool for immunoglobulins or antibodies, T cell receptors, MHC, IgSF and MhcSF
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D301–D307, https://doi.org/10.1093/nar/gkp946
PDBe: Protein Data Bank in Europe
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D308–D317, https://doi.org/10.1093/nar/gkp916
PDBselect 1992–2009 and PDBfilter-select
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D318–D319, https://doi.org/10.1093/nar/gkp786
Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D320–D325, https://doi.org/10.1093/nar/gkp1013
PTGL: a database for secondary structure-based protein topologies
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D326–D330, https://doi.org/10.1093/nar/gkp980
The Gene Ontology in 2010: extensions and refinements
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D331–D335, https://doi.org/10.1093/nar/gkp1018
The Protein Naming Utility: a rules database for protein nomenclature
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D336–D339, https://doi.org/10.1093/nar/gkp958
The comprehensive microbial resource
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D340–D345, https://doi.org/10.1093/nar/gkp912
The Genomes On Line Database (GOLD) in 2009: status of genomic and metagenomic projects and their associated metadata
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D346–D354, https://doi.org/10.1093/nar/gkp848
KEGG for representation and analysis of molecular networks involving diseases and drugs
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D355–D360, https://doi.org/10.1093/nar/gkp896
MBGD update 2010: toward a comprehensive resource for exploring microbial genome diversity
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D361–D365, https://doi.org/10.1093/nar/gkp948
phiSITE: database of gene regulation in bacteriophages
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D366–D370, https://doi.org/10.1093/nar/gkp911
ViralORFeome: an integrated database to generate a versatile collection of viral ORFs
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D371–D378, https://doi.org/10.1093/nar/gkp1000
CyanoBase: the cyanobacteria genome database update 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D379–D381, https://doi.org/10.1093/nar/gkp915
The integrated microbial genomes system: an expanding comparative analysis resource
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D382–D390, https://doi.org/10.1093/nar/gkp887
Megx.net: integrated database resource for marine ecological genomics
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D391–D395, https://doi.org/10.1093/nar/gkp918
MicrobesOnline: an integrated portal for comparative and functional genomics
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D396–D400, https://doi.org/10.1093/nar/gkp919
The MiST2 database: a comprehensive genomics resource on microbial signal transduction
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D401–D407, https://doi.org/10.1093/nar/gkp940
Pathema: a clade-specific bioinformatics resource center for pathogen research
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D408–D414, https://doi.org/10.1093/nar/gkp850
EuPathDB: a portal to eukaryotic pathogen databases
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D415–D419, https://doi.org/10.1093/nar/gkp941
The Aspergillus Genome Database, a curated comparative genomics resource for gene, protein and sequence information for the Aspergillus research community
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D420–D427, https://doi.org/10.1093/nar/gkp751
New tools at the Candida Genome Database: biochemical pathways and full-text literature search
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D428–D432, https://doi.org/10.1093/nar/gkp836
Saccharomyces Genome Database provides mutant phenotype data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D433–D436, https://doi.org/10.1093/nar/gkp917
BeetleBase in 2010: revisions to provide comprehensive genomic information for Tribolium castaneum
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D437–D442, https://doi.org/10.1093/nar/gkp807
FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D443–D447, https://doi.org/10.1093/nar/gkp910
GenomeRNAi: a database for cell-based RNAi phenotypes. 2009 update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D448–D452, https://doi.org/10.1093/nar/gkp1038
SilkDB v2.0: a platform for silkworm (Bombyx mori) genome biology
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D453–D456, https://doi.org/10.1093/nar/gkp801
TriTrypDB: a functional genomic resource for the Trypanosomatidae
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D457–D462, https://doi.org/10.1093/nar/gkp851
WormBase: a comprehensive resource for nematode research
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D463–D467, https://doi.org/10.1093/nar/gkp952
MetaBioME: a database to explore commercially useful enzymes in metagenomic datasets
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D468–D472, https://doi.org/10.1093/nar/gkp1001
The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D473–D479, https://doi.org/10.1093/nar/gkp875
SMPDB: The Small Molecule Pathway Database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D480–D487, https://doi.org/10.1093/nar/gkp1002
The University of Minnesota Biocatalysis/Biodegradation Database: improving public access
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D488–D491, https://doi.org/10.1093/nar/gkp771
The NCBI BioSystems database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D492–D496, https://doi.org/10.1093/nar/gkp858
CORUM: the comprehensive resource of mammalian protein complexes—2009
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D497–D501, https://doi.org/10.1093/nar/gkp914
DRYGIN: a database of quantitative genetic interaction networks in yeast
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D502–D507, https://doi.org/10.1093/nar/gkp820
Dynamic Proteomics: a database for dynamics and localizations of endogenous fluorescently-tagged proteins in living human cells
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D508–D512, https://doi.org/10.1093/nar/gkp808
GWIDD: Genome-wide protein docking database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D513–D517, https://doi.org/10.1093/nar/gkp944
Inferred Biomolecular Interaction Server—a web server to analyze and predict protein interacting partners and binding sites
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D518–D524, https://doi.org/10.1093/nar/gkp842
The IntAct molecular interaction database in 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D525–D531, https://doi.org/10.1093/nar/gkp878
MINT, the molecular interaction database: 2009 update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D532–D539, https://doi.org/10.1093/nar/gkp983
The Negatome database: a reference set of non-interacting protein pairs
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D540–D544, https://doi.org/10.1093/nar/gkp1026
PepX: a structural database of non-redundant protein–peptide complexes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D545–D551, https://doi.org/10.1093/nar/gkp893
STITCH 2: an interaction network database for small molecules and proteins
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D552–D556, https://doi.org/10.1093/nar/gkp937
Ensembl's 10th year
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D557–D562, https://doi.org/10.1093/nar/gkp972
Ensembl Genomes: Extending Ensembl across the taxonomic space
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D563–D569, https://doi.org/10.1093/nar/gkp871
EMMA—mouse mutant resources for the international scientific community
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D570–D576, https://doi.org/10.1093/nar/gkp799
EuroPhenome: a repository for high-throughput mouse phenotyping data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D577–D585, https://doi.org/10.1093/nar/gkp1007
The Mouse Genome Database: enhancements and updates
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D586–D592, https://doi.org/10.1093/nar/gkp880
MouseBook: an integrated portal of mouse resources
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D593–D599, https://doi.org/10.1093/nar/gkp867
MouseIndelDB: a database integrating genomic indel polymorphisms that distinguish mouse strains
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D600–D606, https://doi.org/10.1093/nar/gkp1046
Xenbase: gene expression and improved integration
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D607–D612, https://doi.org/10.1093/nar/gkp953
The UCSC Genome Browser database: update 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D613–D619, https://doi.org/10.1093/nar/gkp939
ENCODE whole-genome data in the UCSC Genome Browser
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D620–D625, https://doi.org/10.1093/nar/gkp961
H-InvDB in 2009: extended database and data mining resources for human genes and transcripts
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D626–D632, https://doi.org/10.1093/nar/gkp1020
The Gene Wiki: community intelligence applied to human gene annotation
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D633–D639, https://doi.org/10.1093/nar/gkp760
Patrocles: a database of polymorphic miRNA-mediated gene regulation in vertebrates
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D640–D651, https://doi.org/10.1093/nar/gkp926
COSMIC (the Catalogue of Somatic Mutations in Cancer): a resource to investigate acquired mutations in human cancer
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D652–D657, https://doi.org/10.1093/nar/gkp995
dbDEPC: a database of Differentially Expressed Proteins in human Cancers
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D658–D664, https://doi.org/10.1093/nar/gkp933
HLungDB: an integrated database of human lung cancer research
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D665–D669, https://doi.org/10.1093/nar/gkp945
Network of Cancer Genes: a web resource to analyze duplicability, orthology and network properties of cancer genes
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D670–D675, https://doi.org/10.1093/nar/gkp957
HRTBLDb: an informative data resource for hormone receptors target binding loci
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D676–D681, https://doi.org/10.1093/nar/gkp734
SelTarbase, a database of human mononucleotide-microsatellite mutations and their potential impact to tumorigenesis and immunology
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D682–D689, https://doi.org/10.1093/nar/gkp839
Gene Expression Atlas at the European Bioinformatics Institute
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D690–D698, https://doi.org/10.1093/nar/gkp936
Cyclebase.org: version 2.0, an updated comprehensive, multi-species repository of cell cycle experiments and derived analysis results
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D699–D702, https://doi.org/10.1093/nar/gkp1044
EMAGE mouse embryo spatial gene expression database: 2010 update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D703–D709, https://doi.org/10.1093/nar/gkp763
FlyTED: the Drosophila Testis Gene Expression Database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D710–D715, https://doi.org/10.1093/nar/gkp1006
GeneSigDB—a curated database of gene expression signatures
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D716–D725, https://doi.org/10.1093/nar/gkp1015
PLANdbAffy: probe-level annotation database for Affymetrix expression microarrays
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D726–D730, https://doi.org/10.1093/nar/gkp969
NCBI Peptidome: a new repository for mass spectrometry proteomics data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D731–D735, https://doi.org/10.1093/nar/gkp1047
The Proteomics Identifications database: 2010 update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D736–D742, https://doi.org/10.1093/nar/gkp964
Protein Structure Initiative Material Repository: an open shared public resource of structural genomics plasmids for the biological community
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D743–D749, https://doi.org/10.1093/nar/gkp999
BioNumbers—the database of key numbers in molecular and cell biology
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D750–D753, https://doi.org/10.1093/nar/gkp889
GeMInA, Genomic Metadata for Infectious Agents, a geospatial surveillance pathogen database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D754–D764, https://doi.org/10.1093/nar/gkp832
BioDrugScreen: a computational drug design resource for ranking molecules docked to the human proteome
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D765–D773, https://doi.org/10.1093/nar/gkp852
CAMP: a useful resource for research on antimicrobial peptides
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D774–D780, https://doi.org/10.1093/nar/gkp1021
T3DB: a comprehensively annotated database of common toxins and their targets
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D781–D786, https://doi.org/10.1093/nar/gkp934
Update of TTD: Therapeutic Target Database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D787–D791, https://doi.org/10.1093/nar/gkp1014
PrimerBank: a resource of human and mouse PCR primer pairs for gene expression detection and quantification
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D792–D799, https://doi.org/10.1093/nar/gkp1005
PeroxisomeDB 2.0: an integrative view of the global peroxisomal metabolome
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D800–D805, https://doi.org/10.1093/nar/gkp935
PMRD: plant microRNA database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D806–D813, https://doi.org/10.1093/nar/gkp818
PRGdb: a bioinformatics platform for plant resistance gene analysis
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D814–D821, https://doi.org/10.1093/nar/gkp978
PlnTFDB: updated content and new features of the plant transcription factor database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D822–D827, https://doi.org/10.1093/nar/gkp805
PhosPhAt: the Arabidopsis thaliana phosphorylation site database. An update
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D828–D834, https://doi.org/10.1093/nar/gkp810
SALAD database: a motif-based database of protein annotations for plant comparative genomics
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D835–D842, https://doi.org/10.1093/nar/gkp831
SoyBase, the USDA-ARS soybean genetics and genomics database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D843–D846, https://doi.org/10.1093/nar/gkp798
AntigenDB: an immunoinformatics database of pathogen antigens
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D847–D853, https://doi.org/10.1093/nar/gkp830
The Immune Epitope Database 2.0
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D854–D862, https://doi.org/10.1093/nar/gkp1004
IPD—the Immuno Polymorphism Database
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D863–D869, https://doi.org/10.1093/nar/gkp879
Archiving next generation sequencing data
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Pages D870–D871, https://doi.org/10.1093/nar/gkp1078
Front-Matter/Back-Matter
Nucleic Acids Research: VOLUME 38 DATABASE ISSUE JANUARY 1, 2010
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Page i, https://doi.org/10.1093/nar/gkp1212
Nucleic Acids Research
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Page ii, https://doi.org/10.1093/nar/gkp1211
Subscriptions
Nucleic Acids Research, Volume 38, Issue suppl_1, 1 January 2010, Page iii, https://doi.org/10.1093/nar/gkp1213
