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Plant Physiology Cover Image for Volume 190, Issue 2
Volume 190, Issue 2
October 2022
ISSN 0032-0889
EISSN 1532-2548

Volume 190, Issue 2, October 2022

Focus Issue on Circadian Rhythms

Editorial

Stacey L Harmer and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 921–923, https://doi.org/10.1093/plphys/kiac353

Update

Cell Biology

Jan Petersen and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 924–937, https://doi.org/10.1093/plphys/kiac141

Some homologs of the angiosperm clock are conserved along the green lineage but may exhibit different functions, as observed in a flagellate chlorophyte alga.

Genes, Development and Evolution

William Davis and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 938–951, https://doi.org/10.1093/plphys/kiac236

Emerging tools and techniques provide insights into how the behavior and outputs of the circadian clock vary across the plant.

Signaling and Response

Akari E Maeda and Norihito Nakamichi
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 952–967, https://doi.org/10.1093/plphys/kiac107

Crop genes that have been implicated in the modulation of photoperiodic flowering time and adaptation include orthologs of Arabidopsis core clock genes.

Madeline W Oravec and Kathleen Greenham
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 968–980, https://doi.org/10.1093/plphys/kiac337

The circadian clock orchestrates the precise coordination of plant processes across daily and annual cycles of light and temperature, resulting in adaptation to local environments.

Shouming Wang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 981–993, https://doi.org/10.1093/plphys/kiac204

The mechanisms by which circadian clocks adjust to daily rhythms of light, dark, temperature, and internal metabolism are now coming to light.

Breakthrough Technologies, Tools, and Resources

Signaling and Response

Titouan Bonnot and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 994–1004, https://doi.org/10.1093/plphys/kiac121

CAST-R allows users to visualize circadian profiles, time of day response to heat stress, phase enrichment, connections to the clock, and compare expression profiles between datasets and plant species.

Research Articles

Biochemistry and Metabolism

Sabine Scandola and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1005–1023, https://doi.org/10.1093/plphys/kiac269

Proteomics and metabolite analysis shows that the only known activator transcription factor family involved in the plant circadian clock impacts carbohydrate metabolism and proteasome regulation.

Cell Biology

James Ronald and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1024–1036, https://doi.org/10.1093/plphys/kiac072

Light signaling pathways converge on the evening complex scaffold protein EARLY FLOWERING3 by controlling its cellular and sub-cellular localization and regulating circadian clock gene expression.

Genes, Development and Evolution

Todd P Michael
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1037–1056, https://doi.org/10.1093/plphys/kiac276

The genetic linkage of the core circadian clock and light signaling genes coincides with the rise to dominance of flowering plants and may explain environment-specific growth as well as heterosis.

Signaling and Response

Hua Wei and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1057–1073, https://doi.org/10.1093/plphys/kiac196

A rice core circadian clock component confers broad-spectrum tolerance to abiotic stress by transcriptional orchestration of multiple key genes in abscisic acid signaling.

Regular Issue Content

News and Views

Marieke Dubois
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1074–1076, https://doi.org/10.1093/plphys/kiac348
Igor Cesarino
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1077–1079, https://doi.org/10.1093/plphys/kiac318
Amanda A Cardoso
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1080–1082, https://doi.org/10.1093/plphys/kiac343
Stefanie Wege
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1083–1084, https://doi.org/10.1093/plphys/kiac349
José Manuel Ugalde
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1085–1087, https://doi.org/10.1093/plphys/kiac347
Lijuan Zhou and Yajin Ye
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1088–1089, https://doi.org/10.1093/plphys/kiac350

Letters

Cell Biology

Chiara Bernardini and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1090–1094, https://doi.org/10.1093/plphys/kiac346

CLas inhibits callose deposition in the sieve pores and the accumulation of reactive oxygen species to favor its cell-to-cell movement.

Signaling and Response

Xiaoman You and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1095–1099, https://doi.org/10.1093/plphys/kiac317

Catalase negatively regulates plant immunity and is targeted and degraded by ubiquitin E3 ligase.

Research Articles

Biochemistry and Metabolism

Edwige J F Souleyre and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1100–1116, https://doi.org/10.1093/plphys/kiac316

Genetic, sensory, and biochemical analyses reveal the importance of three alcohol acyl transferase genes for volatile ester production and flavor intensity in ripe kiwifruit.

Kuenzang Om and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1117–1133, https://doi.org/10.1093/plphys/kiac333

Loss of the pyruvate, phosphate dikinase regulatory protein leads to lower initial rates of C4 photosynthesis during the light induction phase of photosynthesis.

Li-Jie Zhou and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1134–1152, https://doi.org/10.1093/plphys/kiac342

Plants fine-tune anthocyanin homeostasis in flower petals to adapt to different red/far-red light ratios.

Breakthrough Technologies, Tools and Resources

Trevor Weiss and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1153–1164, https://doi.org/10.1093/plphys/kiac285

Epigenetic features substantially influence genome editing efficiency and DNA repair outcomes.

Cell Biology

Huimin Xu and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1165–1181, https://doi.org/10.1093/plphys/kiac298

A SHR-mediated hierarchical transcriptional network composed of multiple MYB transcription factors balances suberization and lignification, integrating stress response, and root development.

Meng Li and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1182–1198, https://doi.org/10.1093/plphys/kiac327

SHR-mediated root lignification is spatially restricted by brassinosteroid signaling through the direct binding of BZR1 to SHR.

Fangfang Niu and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1199–1213, https://doi.org/10.1093/plphys/kiac329

A small guanine-nucleotide-binding (G) protein regulates Golgi morphology, cell plate formation, and plant growth in Arabidopsis by interacting with COAT PROTEIN COMPLEX I components.

Andrew F Galloway and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1214–1227, https://doi.org/10.1093/plphys/kiac341

The root exudate of a root hairless mutant of barley, relative to wild type, has an altered pattern of polysaccharide epitopes and lesser amounts of an acidic soil-binding polysaccharide complex.

Ecophysiology and Sustainability

Mohanned Abdalla and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1228–1241, https://doi.org/10.1093/plphys/kiac229

A physical model interprets transpiration reduction under drought and salinity as a consequence of osmotic gradients at the root surface that cause a severe drop in leaf water potential.

Genes, Development and Evolution

Zahra Zangishei and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1242–1259, https://doi.org/10.1093/plphys/kiac331

MicroRNAs in parasitic plants reflect their lifestyle.

Ying He and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1260–1274, https://doi.org/10.1093/plphys/kiac338

A florigen repression complex regulates grain size by restricting cell expansion in the spikelet hull and controlling seed filling.

Membranes, Transport and Bioenergetics

Pascal Ganz and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1275–1288, https://doi.org/10.1093/plphys/kiac315

To avoid abiotic stress by ammonium toxicity, Arabidopsis increases ABA levels, starting a complex phospho-regulation of ammonium transport, including the phosphatase ABI1 and the kinase CIPK23.

Yann Boursiac and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1289–1306, https://doi.org/10.1093/plphys/kiac281

A model-assisted experimental dissection of architecture and water transport properties of Arabidopsis root systems reveals limiting roles of xylem transport.

Ren-Jie Tang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1307–1320, https://doi.org/10.1093/plphys/kiac330

Tonoplast-localized transporters facilitate Mg2+ retrieval from the vacuole for Arabidopsis to cope with magnesium deficiency.

Signaling and Response

Shuhan Yu and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1321–1333, https://doi.org/10.1093/plphys/kiac311

A calmodulin-like protein activates glutathione S-transferase and fructose 1,6-biphosphate aldolase to improve cold tolerance in alfalfa.

Ning Zhang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1334–1348, https://doi.org/10.1093/plphys/kiac312

The tomato bHLH transcription factor Nrd1 negatively regulates tomato immunity to bacterial speck disease by suppressing a putative defense-related gene encoding an arabinogalactan protein.

Dong-Min Gao and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1349–1364, https://doi.org/10.1093/plphys/kiac319

A plant rhabdovirus accessory protein subverts JA signaling of host plants for insect vector attractiveness and efficient virus transmission.

Zeguang Liu and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1365–1383, https://doi.org/10.1093/plphys/kiac245

The early flooding signal ethylene contributes to forthcoming hypoxia stress by modulating a plethora of processes including reactive oxygen species amelioration and growth cessation.

Friedrich H Kleiner and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1384–1399, https://doi.org/10.1093/plphys/kiac324

A calcium signaling pathway in marine diatoms is activated by cold temperature and enhances survival during simultaneous hypo-osmotic stress.

Johan Quilbé and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1400–1417, https://doi.org/10.1093/plphys/kiac325

Characterization of Aeschynomene evenia mutants altered in nodulation provides information on alternative mechanisms of rhizobium–legume symbiosis

Qiao Wang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1418–1439, https://doi.org/10.1093/plphys/kiac326

Proteomics and functional analysis showed that TaGSTU6/TaCBSX3 interaction plays an important role in wheat resistance to Bgt.

Stephanie E Martinez and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1440–1456, https://doi.org/10.1093/plphys/kiac328

Plants selectively detect germination stimulants in smoke and other butenolide chemicals as a result of evolutionary changes to the ligand-binding pocket of an enzyme-receptor protein.

Benjamin J Spears and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1457–1473, https://doi.org/10.1093/plphys/kiac332

A member of a pathogen-targeted transcription factor family modulates phytohormone response networks and displays brassinosteroid-dependent cellular location and activity.

Xiaoyang Chen and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1474–1489, https://doi.org/10.1093/plphys/kiac334

A secreted fungal subtilase from Ustilaginoidea virens interacts with the positive regulator of innate immunity SUPPRESSOR OF G2 ALLELE OF skp1 to enhance susceptibility to multiple rice pathogens.

Zhongfu Yang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1490–1505, https://doi.org/10.1093/plphys/kiac335

Vernalization-induced DNA hypermethylation is responsible for floral primordium initiation and development in orchardgrass (Dactylis glomerata).

Yaling Yang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1506–1525, https://doi.org/10.1093/plphys/kiac340

Transcription factors ZmNF-YA1 and ZmNF-YB16 play positive roles in plant growth and drought tolerance in maize via directly regulating expression of multiple genes.

Systems and Synthetic Biology

Yu Zhang and others
Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1526–1542, https://doi.org/10.1093/plphys/kiac339

Rice co-expression network analysis identifies gene modules associated with diverse agronomic traits, and these modules provide ample resources for studies on rice trait genes.

Corrections

Plant Physiology, Volume 190, Issue 2, October 2022, Pages 1543–1544, https://doi.org/10.1093/plphys/kiac322
Plant Physiology, Volume 190, Issue 2, October 2022, Page 1545, https://doi.org/10.1093/plphys/kiac323
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