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Plant Physiology Cover Image for Volume 190, Issue 4
Volume 190, Issue 4
December 2022
ISSN 0032-0889
EISSN 1532-2548

Volume 190, Issue 4, December 2022

News and Views

Trinh-Don Nguyen
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2061–2063, https://doi.org/10.1093/plphys/kiac457
Sergio Galindo-Trigo
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2064–2065, https://doi.org/10.1093/plphys/kiac436
Amy Lanctot
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2066–2068, https://doi.org/10.1093/plphys/kiac453
Rachel E Kerwin and Marieke Dubois
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2069–2071, https://doi.org/10.1093/plphys/kiac417
Yana Kazachkova
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2072–2073, https://doi.org/10.1093/plphys/kiac438
Divya Mishra
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2074–2076, https://doi.org/10.1093/plphys/kiac416
Stefanie Wege
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2077–2079, https://doi.org/10.1093/plphys/kiac429
Sarah Courbier
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2080–2081, https://doi.org/10.1093/plphys/kiac443
José Manuel Ugalde
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2082–2084, https://doi.org/10.1093/plphys/kiac458
Guadalupe L Fernández-Milmanda
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2085–2086, https://doi.org/10.1093/plphys/kiac454
Marieke Dubois
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2087–2089, https://doi.org/10.1093/plphys/kiac413
Yajin Ye and Igor Cesarino
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2090–2093, https://doi.org/10.1093/plphys/kiac414

Letter to the Editor

Signaling and Response

Lei Tian and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2094–2098, https://doi.org/10.1093/plphys/kiac452

Arabidopsis thaliana TIR-type immune receptor SNC1 (Suppressor of npr1-1, constitutive 1) requires NADase, but not the 2′,3′-cAMP/cGMP synthetase activity to trigger in planta immune responses.

Letter

Breakthrough Technologies, Tools and Resources

Zhixia Xiao and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2099–2102, https://doi.org/10.1093/plphys/kiac419

The Wildsoydb DataHub is an integrated interface for biologists and breeders to access soybean genomic resources easily, allowing them to fully utilize the results of genomic research.

Update

Genes, Development and Evolution

Frances C Sussmilch and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2103–2114, https://doi.org/10.1093/plphys/kiac424

The molecular nature of Mendel’s genes, the genetic resources available for pea, pea as a model for teaching and research, and recent controversies about Mendel’s data are discussed.

Research Report

Ecophysiology and Sustainability

Daniel N Ginzburg and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2115–2121, https://doi.org/10.1093/plphys/kiac411

Because some genotypes use water at different rates, an accurate comparison of drought phenotypes requires that all genotypes are exposed to uniform soil water content throughout drought treatment.

Research Articles

Biochemistry and Metabolism

Qing-Wen Wu and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2122–2136, https://doi.org/10.1093/plphys/kiac371

The discovery of rhamnosyltransferases in eight accessions of Chrysanthemum species contributes to the biosynthesis of flavone rutinosides and evolution of glycosyltransferases in plants.

Samuel Gámez-Arcas and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2137–2154, https://doi.org/10.1093/plphys/kiac433

The phosphoglucose isomerase1-independent response to microbial volatile compounds involves photosynthesis-related proteome resetting through long-distance glucose-6-P/phosphate translocator2 action.

Osama Ahmed Afifi and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2155–2172, https://doi.org/10.1093/plphys/kiac450

Loss-of-function mutations of two 4-COUMARATE:COENZYME A LIGASE genes in rice result in distinctively different lignin compositional changes, demonstrating their diverse roles in lignin biosynthesis.

Hiruni N Weerasooriya and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2173–2186, https://doi.org/10.1093/plphys/kiac451

Plastid carbonic anhydrase activity supplies the HCO3 required for anaplerotic pathways occurring in plastids and enables normal growth in Arabidopsis.

Breakthrough Technologies, Tools and Resources

Jiaxi Yong and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2187–2202, https://doi.org/10.1093/plphys/kiac430

Layered double hydroxide nanoparticles rapidly penetrate intact plant leaf cells and chloroplasts and efficiently deliver small interfering RNA to downregulate targeted genes.J. Y., B.C. R.Z., and Z.P.X. conceptualized and designed the research. J.Y. conducted experiments, data analysis, and wrote the first draft. M.W conducted experiments, data analysis, and conceptual visualization. S.B. and C.M. conducted the experiments. J.Y., R.Z., B.C., N.M., and Z.P.X. wrote and revised the manuscript. All authors read and commented on the manuscript.

Zhengjing Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2203–2216, https://doi.org/10.1093/plphys/kiac431

The sequential transformation gene targeting method provides a broadly applicable technology for precise genome manipulation in Arabidopsis.

Cell Biology

Shan Jiang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2217–2228, https://doi.org/10.1093/plphys/kiac415

SNW/SKI-INTERACTING PROTEIN interacts with UBIQUITIN-SPECIFIC PROTEASE14 and ULTRAVIOLET-B INSENSITIVE4 to influence endoreduplication and cell growth in Arabidopsis.

Lisha Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2229–2245, https://doi.org/10.1093/plphys/kiac435

The integrity of the pollen wall structure is essential for pollen development and maturity in rice.

Ecophysiology and Sustainability

Amy Ny Aina Aritsara and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2246–2259, https://doi.org/10.1093/plphys/kiac403

Mangrove species favor succulence in leaves and fine roots, with an accentuated hydraulic segmentation in the roots, whereas most karst species promote sclerophylly and belowground segmentation.

Ernst D Schäfer and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2260–2278, https://doi.org/10.1093/plphys/kiac405

Root loss has a major impact on crop development and nutrient uptake; modeling reveals that the magnitude of the effect depends on species, root phenotype, and soil conditions.

Yannik Müllers and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2279–2294, https://doi.org/10.1093/plphys/kiac422

The hydraulic conductance between soil and leaf decreases exponentially with decreasing soil water potential, at a species-specific rate related to the decline rate of stomatal conductance.

Lu Zhou and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2295–2314, https://doi.org/10.1093/plphys/kiac455

Diatoms use a series of complex and different responsive schemes in photosynthesis and carbon metabolism to optimize their growth under mild and severe light fluctuations.

Genes, Development and Evolution

Thiya Mukherjee and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2315–2334, https://doi.org/10.1093/plphys/kiac383

In GLABRA2 (GL2), the homeodomain is required for DNA binding, while the steroidogenic acute regulatory-related lipid transfer (START) domain plays a critical role in homodimerization and protein turnover.

Ke Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2335–2349, https://doi.org/10.1093/plphys/kiac370

AUXIN RESPONSE FACTOR3 represses cytokinin activity and WUSCHEL expression to coordinate meristem activity noncell-autonomously, while it regulates phyllotactic patterning cell-autonomously.

Pasquale Luca Curci and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2350–2365, https://doi.org/10.1093/plphys/kiac374

Cross-species network analysis enables identification and validation of growth regulators in Arabidopsis.

Sun-Ju Rhee and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2366–2379, https://doi.org/10.1093/plphys/kiac363

A vector based on cucumber fruit mottle mosaic virus from Cucumis melo facilitates large-scale validation of male sterility-related gene functions in watermelon (Citrullus lanatus).

Kumud Saini and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2380–2397, https://doi.org/10.1093/plphys/kiac345

High ambient temperature suppresses Arabidopsis leaf size by reducing cell proliferation via coordination of two diverse transcription factors integrating environmental and developmental signals.

Hans Motte and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2398–2416, https://doi.org/10.1093/plphys/kiac402

The root of the spike moss Selaginella moellendorffii bifurcates following a cell division of the single stem cell, and the bifurcation involves conserved genetic modules known from angiosperm roots.

Linhao Xu and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2417–2429, https://doi.org/10.1093/plphys/kiac409
Jiaqi Wang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2430–2448, https://doi.org/10.1093/plphys/kiac410

The previously identified Cucurbitaceae common paleotetraploidization is shared by Cucurbitales and Begoniaceae.

Mehtab Muhammad Aslam and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2449–2465, https://doi.org/10.1093/plphys/kiac418

Phosphorus-responsive PURPLE ACID PHOSPHATASE12 and auxin-producing Bacillus spp. promote rhizosheath formation in Lupinus albus under soil drying conditions, enhancing phosphorus acquisition.

Grégoire Le Provost and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2466–2483, https://doi.org/10.1093/plphys/kiac420

Combining RNA-seq and a genome scan of genetic divergence between species highlights potentially adaptive genes in European white oaks.

Xue Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2484–2500, https://doi.org/10.1093/plphys/kiac437

A distinct FlL/YAB3 subclade gene DWARF AND ROBUST PLANT regulates plant height by binding to the CmGA3ox1 promoter modulating gibberellin biosynthesis in chrysanthemum.

Zefeng Zhai and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2501–2518, https://doi.org/10.1093/plphys/kiac440

Transcriptome analysis identified a set of transcription factors essential for abscisic acid-promoted fruit softening in sweet cherry.

Miao Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2519–2538, https://doi.org/10.1093/plphys/kiac442

Acetylome reprogramming plays an important role in trait evolution during polyploidization through regulation of enzyme activity and protein abundance.

Jennifer A Noble and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2539–2556, https://doi.org/10.1093/plphys/kiac444

Expression divergence plays an important role in retention of Lorelei-Like GPI-anchored protein duplicates in angiosperms.

Philippe Nicolas and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2557–2578, https://doi.org/10.1093/plphys/kiac445

An extensive and tissue-specific transcriptional reprograming affecting metabolic, hormonal, and epigenetic pathways underlies tomato fruit development during drought acclimation.

Membranes, Transport and Bioenergetics

Jie He and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2579–2600, https://doi.org/10.1093/plphys/kiac387

Activity of BIVALENT CATION TRANSPORTER 3 in the trans-Golgi is critical for glycosylation reactions, plant growth under Mn deficiency, pollen tube elongation, and intracellular distribution of Mn.

Jingxuan Guo and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2601–2616, https://doi.org/10.1093/plphys/kiac434

A tonoplast-localized transporter enables root-to-shoot manganese translocation via mediating vacuolar manganese release of root stellar cells and contributes to low manganese tolerance in maize.

Signaling and Response

Jian Yang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2617–2636, https://doi.org/10.1093/plphys/kiac375

Plants lacking a vacuolar H+/Ca transporter are more tolerant to anoxia and submergence.

Haiyan Cao and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2637–2650, https://doi.org/10.1093/plphys/kiac376

Protein arginine methyltransferase 5-mediated methylation of l-cysteine desulfhydrase at Arg-83 increases its desulfhydrase activity and elevates H2S production in Arabidopsis.

Amber L Hauvermale and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2651–2670, https://doi.org/10.1093/plphys/kiac406

The plant protein PUX1 interacts with the gibberellin hormone receptor and functions as a negative regulator of gibberellin hormone responses, including seed germination, plant growth, and flowering.

Hongtao Tian and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2671–2687, https://doi.org/10.1093/plphys/kiac336

A smoke-activated F-box protein negatively regulates drought tolerance by inhibiting stomatal closure, cuticle formation, and root hair development in Arabidopsis.

Ningning Chen and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2688–2705, https://doi.org/10.1093/plphys/kiac404

A phosphate starvation response mechanism mediated by PtoWRKY40 and PtoPHL3 regulates the inorganic phosphate content in poplars.

Abhishesh Bajracharya and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2706–2721, https://doi.org/10.1093/plphys/kiac412

The Mediator subunit MED14 promotes thermomorphogenesis by interacting with PHYTOCHROME-INTERACTING FACTOR 4 and HEMERA to induce the expression of growth-promoting genes at elevated temperatures.

Nargis Parvin Laha and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2722–2738, https://doi.org/10.1093/plphys/kiac425

Arabidopsis INOSITOL (1,3,4) TRIPHOSPHATE 5/6 KINASE1-dependent inositol polyphosphates bind to the auxin receptor complex and regulate auxin responses.

Jia Wei and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2739–2756, https://doi.org/10.1093/plphys/kiac426

Early defoliation promotes auxin efflux from buds to release paradormancy in autumn, inducing out-of-season flowering, which differs from release of apical-dominance-related lateral bud paradormancy.

Ka Zhang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2757–2774, https://doi.org/10.1093/plphys/kiac439

BnaA03.WRKY28 interacts with BnaA09.VQ12 and takes precedence over phosphorylated BnWRKY33 to bind to the BnWRKY33 promoter, thereby weakening Sclerotinia resistance but promoting branching.

Priya Gambhir and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2775–2796, https://doi.org/10.1093/plphys/kiac441

An ethylene response factor regulates tomato fruit ripening by activating auxin response factors involved in ripening.

Guanqun Wang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2797–2811, https://doi.org/10.1093/plphys/kiac448

Chromatin accessibility, histone modification, and transcriptome data provide valuable resource for rice floral tissue development.

Jia-Xing Guo and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2812–2827, https://doi.org/10.1093/plphys/kiac456

The C-type cyclin protein CycC1;1 interacts with ABSCISIC ACID INSENSITIVE5 (ABI5) to downregulate the expression of ABA-responsive genes and ABI5 itself, thereby inhibiting ABA signaling during seed germination.

Systems and Synthetic Biology

Peng Wang and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2828–2846, https://doi.org/10.1093/plphys/kiac344

Analysis of transcripts and metabolites in wild-type and 13 lignin biosynthetic mutants of Arabidopsis reveals the global impact on transcription and metabolite network perturbations.

Jasim Basheer and others
Plant Physiology, Volume 190, Issue 4, December 2022, Pages 2847–2867, https://doi.org/10.1093/plphys/kiac389

TALEN-based knockout lines of HvMPK3, showing elevated antioxidant capacity mitigating ROS production and root cell wall stiffening by suberin, confer barley root resistance to Fusarium graminearum.

Corrections

Plant Physiology, Volume 190, Issue 4, December 2022, Page 2868, https://doi.org/10.1093/plphys/kiac421
Plant Physiology, Volume 190, Issue 4, December 2022, Page 2869, https://doi.org/10.1093/plphys/kiac446
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