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Volume 21, Issue 1, January 2020
Articles
Sequence clustering in bioinformatics: an empirical study
Quan Zou and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 1–10, https://doi.org/10.1093/bib/bby090
CPPred-FL: a sequence-based predictor for large-scale identification of cell-penetrating peptides by feature representation learning
Xiaoli Qiang and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 11–23, https://doi.org/10.1093/bib/bby091
Strategies for calibrating models of biology
Mark N Read and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 24–35, https://doi.org/10.1093/bib/bby092
Comprehensive and critical evaluation of individualized pathway activity measurement tools on pan-cancer data
Sangsoo Lim and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 36–46, https://doi.org/10.1093/bib/bby097
MicroRNA-small molecule association identification: from experimental results to computational models
Xing Chen and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 47–61, https://doi.org/10.1093/bib/bby098
Human-like layout algorithms for signalling hypergraphs: outlining requirements
Martin Siebenhaller and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 62–72, https://doi.org/10.1093/bib/bby099
The landscape of miRNA-related ceRNA networks for marking different renal cell carcinoma subtypes
Liu Qin and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 73–84, https://doi.org/10.1093/bib/bby101
Landscape of SNPs-mediated lncRNA structural variations and their implication in human complex diseases
Hong Wang and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 85–95, https://doi.org/10.1093/bib/bby102
The application of Hadoop in structural bioinformatics
Jamie J Alnasir and Hugh P Shanahan
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 96–105, https://doi.org/10.1093/bib/bby106
Comparative analysis and prediction of quorum-sensing peptides using feature representation learning and machine learning algorithms
Leyi Wei and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 106–119, https://doi.org/10.1093/bib/bby107
A comprehensive review of computational prediction of genome-wide features
Tianlei Xu and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 120–134, https://doi.org/10.1093/bib/bby110
Characteristics of plant circular RNAs
Qinjie Chu and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 135–143, https://doi.org/10.1093/bib/bby111
Dating admixture events is unsolved problem in multi-way admixed populations
Emile R Chimusa and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 144–155, https://doi.org/10.1093/bib/bby112
Multilevel heterogeneous omics data integration with kernel fusion
Haitao Yang and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 156–170, https://doi.org/10.1093/bib/bby115
Comprehensive review of the identification of essential genes using computational methods: focusing on feature implementation and assessment
Chuan Dong and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 171–181, https://doi.org/10.1093/bib/bby116
Network embedding in biomedical data science
Chang Su and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 182–197, https://doi.org/10.1093/bib/bby117
Fuzzy Petri nets for modelling of uncertain biological systems
Fei Liu and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 198–210, https://doi.org/10.1093/bib/bby118
Interactive visual analysis of drug–target interaction networks using Drug Target Profiler, with applications to precision medicine and drug repurposing
Ziaurrehman Tanoli and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 211–220, https://doi.org/10.1093/bib/bby119
Quantifying Waddington’s epigenetic landscape: a comparison of single-cell potency measures
Jifan Shi and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 248–261, https://doi.org/10.1093/bib/bby093
Algebraic shortcuts for leave-one-out cross-validation in supervised network inference
Michiel Stock and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 262–271, https://doi.org/10.1093/bib/bby095
Copy number aberrations from Affymetrix SNP 6.0 genotyping data—how accurate are commonly used prediction approaches?
Adriana Pitea and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 272–281, https://doi.org/10.1093/bib/bby096
Comprehensive assessment of nine docking programs on type II kinase inhibitors: prediction accuracy of sampling power, scoring power and screening power
Chao Shen and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 282–297, https://doi.org/10.1093/bib/bby103
HITS-PR-HHblits: protein remote homology detection by combining PageRank and Hyperlink-Induced Topic Search
Bin Liu and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 298–308, https://doi.org/10.1093/bib/bby104
dbCPM: a manually curated database for exploring the cancer passenger mutations
Zhenyu Yue and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 309–317, https://doi.org/10.1093/bib/bby105
AIMMS suite: a web server dedicated for prediction of drug resistance on protein mutation
Feng-Xu Wu and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 318–328, https://doi.org/10.1093/bib/bby113
gmRAD: an integrated SNP calling pipeline for genetic mapping with RADseq across a hybrid population
Dan Yao and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 329–337, https://doi.org/10.1093/bib/bby114
Cancer-specific expression quantitative loci are affected by expression dysregulation
Quanhu Sheng and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 338–347, https://doi.org/10.1093/bib/bby108
CytoPred: 7-gene pair metric for AML cytogenetic risk prediction
Sameer Salunkhe and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 348–354, https://doi.org/10.1093/bib/bby100
Bioinformatics methodologies for coeliac disease and its comorbidities
Eugenio Del Prete and others
Briefings in Bioinformatics, Volume 21, Issue 1, January 2020, Pages 355–367, https://doi.org/10.1093/bib/bby109
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