
Cover image

On the Cover: Photosynthetic activity of pp7l mutants during seedling development is most strongly affected in young seedlings and recovers gradually over 10 days during subsequent seedling development. These seedling and the PAM images shown represent the cotyledon phenotypes and various photosynthetic parameters of 4-to-10-day-old Col-0, pp7l-1 and sig2 and sig6 mutants. Credit: Duorong Xu and Tatjana Kleine.
Volume 180, Issue 1, May 2019
ON THE INSIDE
On the Inside
NEWS AND VIEWS
Salicylic Acid, Senescence, and Heterosis
Diverse Strategies Coping with Winter in Barley and its Relatives
Epigenetic Regulation of mRNA Polyadenylation Site Selection
A Bridge between Kingdoms: Introduction of a Golden Gate-Based Tool Kit for Cyanobacteria
Plastid Sulfate Transporters Open Doors to Abiotic Stress Resistance
Cutting the Mustard: Evolving Endoplasmic Reticulum Structures into Endoplasmic Reticulum Bodies for Plant Defense
Two Is Better than One: Dual SEC11 Binding Sites Regulate SYP121–Mediated Vesicle Trafficking
BRacing for Water Stress: Brassinosteroid Signaling Promotes Drought Survival in Wheat
Balance under Stress: A Case of Mixed Signals
LETTERS
Nitrate Modulates the Differentiation of Root Distal Stem Cells
Nitrate regulation of root stem cell activity is auxin-dependent.
UPDATE
Genetic Engineering for Disease Resistance in Plants: Recent Progress and Future Perspectives
A review of the recent progress in plant genetic engineering for disease resistance highlights future challenges and opportunities in the field.
BREAKTHROUGH TECHNOLOGIES
CyanoGate: A Modular Cloning Suite for Engineering Cyanobacteria Based on the Plant MoClo Syntax
A Golden Gate-based assembly standard developed for cloning and transformation in cyanobacteria is compatible with, and builds on, the broadly established plant modular cloning syntax.
An Efficient System for Ds Transposon Tagging in Brachypodium distachyon
Ds transposon tagging is an efficient system in Brachypodium distachyon for large-scale insertional mutagenesis.
RESEARCH REPORT
Synergistic Pectin Degradation and Guard Cell Pressurization Underlie Stomatal Pore Formation
Degradation of pectic homogalacturonan, but not other cell wall components, promotes stomatal pore initiation, and homogalacturonan degradation and turgor increase both contribute to pore enlargement.
Regeneration of Solanum tuberosum Plants from Protoplasts Induces Widespread Genome Instability
Genome sequencing in potato plants regenerated from protoplasts reveals widespread changes in chromosome number and structure.
Articles
BIOCHEMISTRY AND METABOLISM
A MYB Triad Controls Primary and Phenylpropanoid Metabolites for Pollen Coat Patterning
A triad of Arabidopsis MYB transcription factors controls the production of flavonols and additional phenylpropanoids that are embedded as pollen coat material.
Extensive Variations in Diurnal Growth Patterns and Metabolism Among Ulva spp. Strains
Sea lettuce (Ulva spp.) strains show extensive variation in growth and metabolism, demonstrating a large potential for strain selection in boosting biomass and metabolite yields in aquaculture.
Isoprene Acts as a Signaling Molecule in Gene Networks Important for Stress Responses and Plant Growth
Arabidopsis, which does not normally emit isoprene, was engineered to emit isoprene, and growth and development as well as gene expression were analyzed to determine how isoprene affects plants.
Deficiency in the Phosphorylated Pathway of Serine Biosynthesis Perturbs Sulfur Assimilation
The Phosphorylated Pathway of l-Ser Biosynthesis in Arabidopsis thaliana provides Ser for thiol assimilation in heterotrophic tissues such as roots.
CYP79D73 Participates in Biosynthesis of Floral Scent Compound 2-Phenylethanol in Plumeria rubra
A cytochrome P450 enzyme contributes to the production of 2-phenylethanol and nitrogen-containing volatiles in Plumeria.
Appropriate Thiamin Pyrophosphate Levels Are Required for Acclimation to Changes in Photoperiod
Plants over-accumulating vitamin B1 lose metabolic network flexibility and therefore cannot acclimate to an altered photoperiod.
CELL BIOLOGY
Mitochondrial Pyruvate Carriers Prevent Cadmium Toxicity by Sustaining the TCA Cycle and Glutathione Synthesis
The plant’s response to heavy metals requires glutamate and mitochondrial pyruvate carriers.
A Family of NAI2-Interacting Proteins in the Biogenesis of the ER Body and Related Structures
Three related NAI2-interacting proteins from Arabidopsis are critical components in the biogenesis of ER bodies found only in the Brassicales and related structures likely also present in other plants.
Dual Sites for SEC11 on the SNARE SYP121 Implicate a Binding Exchange during Secretory Traffic
The regulatory protein SEC11 binds differentially via two motifs on the Qa-SNARE SYP121 N terminus, only one of which overlaps with the K+ channel-binding motif, to facilitate a binding exchange during SNARE complex assembly.
Senescence and Defense Pathways Contribute to Heterosis
Reduction of levels of salicylic acid in Arabidopsis C24/Ler hybrids results in a decrease in the expression of defense response genes and a delay in senescence.
GENES, DEVELOPMENT AND EVOLUTION
ABC Transporter-Mediated Transport of Glutathione Conjugates Enhances Seed Yield and Quality in Chickpea
An integrated genomic strategy delineated superior alleles of an ABC transporter gene, whose marker-assisted introgression enhanced the yield of chickpea by modulating glutathione-conjugate transport.
Histone Deacetylase HDA19 Affects Root Cortical Cell Fate by Interacting with SCARECROW
Histone deacetylase HDA19 acts through SCARECROW to regulate Arabidopsis root cortical cell fate and epidermal cell pattering.
The AAA-ATPase MIDASIN 1 Functions in Ribosome Biogenesis and Is Essential for Embryo and Root Development
AtMDN1 plays roles in embryogenesis and root meristem maintenance, and its mutation leads to defects in nuclear export of the pre-60S ribosome and in pre-rRNA processing.
Control of Cognate Sense mRNA Translation by cis-Natural Antisense RNAs
A robust pipeline identifies and experimentally validates cis-natural antisense transcripts controlling cognate sense mRNA translation.
Extrachloroplastic PP7L Functions in Chloroplast Development and Abiotic Stress Tolerance
Arabidopsis protein phosphatase PP7-like (PP7L) is a predominantly nuclear-localized protein that promotes chloroplast translation and development, thus contributing to abiotic stress tolerance.
HDA9-PWR-HOS15 Is a Core Histone Deacetylase Complex Regulating Transcription and Development
Arabidopsis HISTONE DEACETYLASE9 requires both PWR and HOS15 to regulate histone modifications, gene expression, and plant development.
ESA1 Is Involved in Embryo Sac Abortion in Interspecific Hybrid Progeny of Rice
ESA1 is involved in embryo sac abortion in hybrid backcross progeny derived from common wild rice and cultivated rice.
FT Modulates Genome-Wide DNA-Binding of the bZIP Transcription Factor FD
Genomic and biochemical analyses identify targets of the flowering time regulator FD at the genome-wide scale and shed light on the requirement for interaction with the florigen FLOWERING LOCUS T.
Ubiquitin Specific Protease 15 Has an Important Role in Regulating Grain Width and Size in Rice
OsUBP15, encoding a ubiquitin-specific protease15, regulates grain width and size in rice.
Antagonistic Actions of FPA and IBM2 Regulate Transcript Processing from Genes Containing Heterochromatin
Intronic heterochromatic marks, associated with alternative polyadenylation sites, are decoded by RNA-binding proteins like FPA and IBM2, to tune the expression of key regulator genes such as IBM1 or RPP7.
Evolution of Cold Acclimation and Its Role in Niche Transition in the Temperate Grass Subfamily Pooideae
Comparative analysis of cold response in Pooideae species shows that cold acclimation is common in Pooideae but that this adaptation has largely evolved independently in different tribes.
Genetics of Variable Disease Expression Conferred by Inverse Gene-For-Gene Interactions in the Wheat-Parastagonospora nodorum Pathosystem
Host gene-effector interactions in the wheat-P. nodorum pathosystem display additivity, epistasis, differential effector gene expression, and complex interplay of genetic regulation.
Comparative Transcriptomic Analysis Provides Insight into the Domestication and Improvement of Pear (P. pyrifolia) Fruit
Genes associated with stone cell formation, fruit size, and sugar content underwent directional selection during pear domestication and improvement, which contributed to drastic changes of cultivated pears.
An Essential Role for miRNA167 in Maternal Control of Embryonic and Seed Development
Complete deletion of the four MIR167 genes in Arabidopsis using CRISPR/Cas9 leads to late flowering and defects in flower and seed development.
MEMBRANES, TRANSPORT AND BIOENERGETICS
The Potassium Transporter SlHAK10 Is Involved in Mycorrhizal Potassium Uptake
The gene SlHAK10 encodes a mycorrhiza-specific potassium transporter of the KT/KUP/HAK family that mediates K+ uptake at the intraradical symbiotic interface in tomato.
SIGNALING AND RESPONSE
Identification of Novel Inhibitors of Auxin-Induced Ca2+ Signaling via a Plant-Based Chemical Screen
Screening of an annotated library of biologically active molecules for inhibitory effects on auxin-induced Ca2+ entry in BY-2 cells yielded several new inhibitors for investigating Ca2+ signaling.
B-Box Containing Proteins BBX30 and BBX31, Acting Downstream of HY5, Negatively Regulate Photomorphogenesis in Arabidopsis
Two repressors of light signaling, BBX30 and BBX31, are transcriptionally and negatively regulated by the transcription factor HY5 through direct binding to the G-box cis-element present in their promoters.
Mesorhizobium huakuii HtpG Interaction with nsLTP AsE246 Is Required for Symbiotic Nitrogen Fixation
The Mesorhizobium huakuii molecular chaperone HtpG interacts with the lipid transfer protein AsE246, which plays an essential role in effective root nodule development and symbiotic nitrogen fixation.
The R2R3-MYB Transcription Factor MYB49 Regulates Cadmium Accumulation
ABI5 interacts with MYB49 and represses its function by preventing its binding to the downstream genes bHLH38, bHLH101, HIPP22, and HIPP44, resulting in inactivation of IRT1 and reduced Cd uptake.
Proteolytic Processing of SERK3/BAK1 Regulates Plant Immunity, Development, and Cell Death
Arabidopsis BAK1, a co-receptor of multiple receptor-like kinases, undergoes a proteolytic cleavage process that is essential for its functions in plant immunity, growth, and cell death control.
Independent Regulation of Symbiotic Nodulation by the SUNN Negative and CRA2 Positive Systemic Pathways
SUNN and CRA2 negative and positive systemic pathways independently regulate symbiotic nodulation in Medicago truncatula.
AVR2 Targets BSL Family Members, Which Act as Susceptibility Factors to Suppress Host Immunity
Late blight pathogen Phytophthora infestans uses effector Avr2 to target BSL phosphatases to suppress plant immunity.
The Chromatin Factor HNI9 and ELONGATED HYPOCOTYL5 Maintain ROS Homeostasis under High Nitrogen Provision
Excessive nitrogen supply leads to reactive oxygen species accumulation and requires the function of major transcriptional regulators to maintain physiological balance.
SULTR3s Function in Chloroplast Sulfate Uptake and Affect ABA Biosynthesis and the Stress Response
The sultr3 quintuple mutant unequivocally demonstrates that sulfate transporter subfamily 3 is responsible for more than half of the chloroplast sulfate uptake and influences downstream sulfate assimilation and ABA biosynthesis as well as sulfate-induced stomatal closure.
BES/BZR Transcription Factor TaBZR2 Positively Regulates Drought Responses by Activation of TaGST1
A BES/BZR-type transcription factor, TaBZR2, activates TaGST1 to scavenge reactive oxygen species and mediates crosstalk between brassinosteroids and drought signaling pathways.
High-CO2/Hypoxia-Responsive Transcription Factors DkERF24 and DkWRKY1 Interact and Activate DkPDC2 Promoter
Two high-CO2/hypoxia responsive transcription factors from persimmon fruit, DkERF24 and DkWRKY1, form a complex and synergistically transactivate the promoter of the hypoxia-responsive gene DkPDC2.
ANAC017 Coordinates Organellar Functions and Stress Responses by Reprogramming Retrograde Signaling
Overexpression of ANAC017 in Arabidopsis leads to restricted growth, cell death, and early senescence due to impaired organellar retrograde signaling and transcriptomic reprogramming.
SYSTEMS AND SYNTHETIC BIOLOGY
Highly Resolved Systems Biology to Dissect the Etioplast-to-Chloroplast Transition in Tobacco Leaves
A comprehensive, high-resolution overview is presented of the molecular, ultrastructural, and physiological events involved in chloroplast differentiation and thylakoid biogenesis.