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Journal Article
ODE-DSN: A surrogate model for dynamic stiffness in microscopic RVE problems under nonuniform time-step strain inputs
Kai Xie and others
Journal of Computational Design and Engineering, Volume 12, Issue 2, February 2025, Pages 49–60, https://doi.org/10.1093/jcde/qwaf012
Published: 22 January 2025
...Kai Xie; Yongqing Huo; Zhongxin Li; Zhilin Wu Correspondence: [email protected] Correspondence: [email protected] Graphical Abstract Figure. The ODE-DSN Model under a Multiscale Problem ...
Journal Article
Scalable couplings for the random walk Metropolis algorithm
Tamás P Papp and Chris Sherlock
Journal of the Royal Statistical Society Series B: Statistical Methodology, qkae113, https://doi.org/10.1093/jrsssb/qkae113
Published: 16 December 2024
... be of independent interest. We illustrate the applicability of our proposed couplings, and the potential for extending our ideas, with various numerical experiments. couplings Markov chain Monte Carlo methods ODE limit optimal scaling EPSRC 10.13039/501100000266 EP/S022252/1 EP/R034710/1 Couplings...
Journal Article
Adaptive output regulation for a one-dimensional wave system with variable coefficients subject to unknown biased harmonic disturbances
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Ning Peng and Jun-Jun Liu
IMA Journal of Mathematical Control and Information, Volume 41, Issue 4, December 2024, Pages 684–707, https://doi.org/10.1093/imamci/dnae032
Published: 22 November 2024
... and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( https://dbpia.nl.go.kr/pages/standard-publication-reuse-rights ) Abstract In this work, we consider the output tracking problem of a hybrid wave-ODE system subject to unknown external disturbances in all...
Journal Article
On a new method for the state and output feedback exponential stabilization of a cascaded wave PDE-ODE system with nonlinear boundary condition
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Najmeh Ghaderi
IMA Journal of Mathematical Control and Information, Volume 40, Issue 4, December 2023, Pages 714–745, https://doi.org/10.1093/imamci/dnad027
Published: 26 October 2023
... and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( https://dbpia.nl.go.kr/pages/standard-publication-reuse-rights ) Abstract This study presents a novel approach for the state and output feedback exponential control of cascaded unstable ODE-wave equations...
Journal Article
Bayesian Multi-level Mixed-effects Model for Influenza Dynamics
Hanwen Huang
Journal of the Royal Statistical Society Series C: Applied Statistics, Volume 71, Issue 5, November 2022, Pages 1978–1995, https://doi.org/10.1111/rssc.12603
Published: 24 October 2022
...Hanwen Huang The rest of the paper is organised as follows. Section 2 describes ODE models for population-level influenza dynamics. Section 3 outlines the Bayesian algorithm for ODE parameter estimation. Section 4 presents results from a simulation study. Section 5 illustrates...
Journal Article
Ecological footprint of energy and waste generation for environmental sustainability in Ijebu Ode, Ogun State, Nigeria
Edet Otto and Henry Sawyerr
International Journal of Low-Carbon Technologies, Volume 17, 2022, Pages 637–644, https://doi.org/10.1093/ijlct/ctac048
Published: 13 May 2022
... The aim of this study was to evaluate the Ecological Footprint of Energy and Waste generation in Ijebu Ode, and the study adopted descriptive cross-sectional design and data were collected from 400 systemically sampled households through structured questionnaires and analysed using descriptive statistics...
Journal Article
A new approach for stabilization of Heat-ODE cascaded systems with boundary delayed control
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Li Zhang and others
IMA Journal of Mathematical Control and Information, Volume 39, Issue 1, March 2022, Pages 112–131, https://doi.org/10.1093/imamci/dnab037
Published: 17 December 2021
... Publication Model ( https://dbpia.nl.go.kr/journals/pages/open_access/funder_policies/chorus/standard_publication_model ) Abstract The uniform stabilization problem is addressed for a Heat-ODE cascaded system with boundary delayed control. A simple, direct and easily calculated controller is proposed...
Journal Article
Exploring the Dynamics of Virulent and Avirulent Aphids: A Case for a ‘Within Plant’ Refuge
Aniket Banerjee and others
Journal of Economic Entomology, Volume 115, Issue 1, February 2022, Pages 279–288, https://doi.org/10.1093/jee/toab218
Published: 19 November 2021
... nonlocal ODE model Insect Management Knowledge Program through Monsanto Iowa State University 10.13039/100009227 National Science Foundation 10.13039/100000001 1839993 A challenge for using insect-resistant plants is the evolution of subpopulations of the target pest that survive...
Journal Article
A Review of Key Features and Their Implementation in Unstructured, Structured, and Agent‐Based Population Models for Ecological Risk Assessment
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Chiara Accolla and others
Integrated Environmental Assessment and Management, Volume 17, Issue 3, 1 May 2021, Pages 521–540, https://doi.org/10.1002/ieam.4362
Published: 01 October 2020
... Helmholtz International Fellow Award Good modeling practice Ecological risk assessment Matrix models Agent‐based models ODE models Abstract Population models can provide valuable tools for ecological risk assessment (ERA). A growing amount of work on model development and documentation is now available...
Journal Article
Exponential stabilization of an ODE–linear KdV cascaded system with boundary input delay
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Habib Ayadi
IMA Journal of Mathematical Control and Information, Volume 37, Issue 4, December 2020, Pages 1506–1523, https://doi.org/10.1093/imamci/dnaa022
Published: 23 September 2020
..., Standard Journals Publication Model ( https://dbpia.nl.go.kr/journals/pages/open_access/funder_policies/chorus/standard_publication_model ) Abstract This paper considers the well posedness and the exponential stabilization problems of a cascaded ordinary differential equation (ODE)–partial differential...
Journal Article
Dynamic modelling of the iron deficiency modulated transcriptome response in Arabidopsis thaliana roots
Alexandr Koryachko and others
in silico Plants, Volume 1, Issue 1, 2019, diz005, https://doi.org/10.1093/insilicoplants/diz005
Published: 12 June 2019
...Alexandr Koryachko; Anna Matthiadis; Samiul Haque; Durreshahwar Muhammad; Joel J Ducoste; James M Tuck; Terri A Long; Cranos M Williams We characterized gene expression dynamics in the Gene Regulatory Network with a set of ODEs to capture the change in expression dx over time dt...
Journal Article
Impact of ART-induced viral suppression on the HIV epidemic in Italy
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Federico Papa and others
Mathematical Medicine and Biology: A Journal of the IMA, Volume 37, Issue 2, June 2020, Pages 183–211, https://doi.org/10.1093/imammb/dqz010
Published: 04 June 2019
... stability of a unique positive equilibrium are proved. HIV epidemic antiretroviral therapy viral suppression epidemic ODE model stability of equilibrium points At the end of 2014, 109,000–148,000 individuals were estimated to live with the human immunodeficiency virus–1 (HIV) in Italy ( Camoni et...
Journal Article
Contextual Invariance and Schoenberg’s Hexatonic Webs
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Joe Argentino
Music Theory Spectrum, Volume 41, Issue 1, Spring 2019, Pages 104–125, https://doi.org/10.1093/mts/mty026
Published: 17 January 2019
... Hexachordal invariance plays a critical role in several of Schoenberg’s hexatonic-based compositions, including the Suite, Op. 29, Ode to Napoleon, Op. 41, and Modern Psalm, Op. 50c. In this article, I utilize contextual transformations in order to unveil specific types of invariant...
Journal Article
Dynamic Models for Estimating the Effect of HAART on CD4 in Observational Studies: Application to the Aquitaine Cohort and the Swiss HIV Cohort Study
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Mélanie Prague and others
in
Biometrics
Biometrics, Volume 73, Issue 1, March 2017, Pages 294–304, https://doi.org/10.1111/biom.12564
Published: 26 July 2016
... also consider continuous-time models based on ordinary differential equations with non-linear mixed effects (ODE-NLME). These mechanistic models allow incorporating biological knowledge when available, which leads to increased statistical evidence for detecting treatment effect. Because inference...
Journal Article
An elementary proof of convergence to the mean-field equations for an epidemic model
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Benjamin Armbruster and Ekkehard Beck
IMA Journal of Applied Mathematics, Volume 82, Issue 1, February 2017, Pages 152–157, https://doi.org/10.1093/imamat/hxw010
Published: 13 April 2016
... of ordinary differential equations (ODEs) to model disease spread. In addition to their simplicity, these models are also the mean-field approximations of more accurate stochastic models of disease spread on contact networks. For the simplest case of a stochastic susceptible–infected–susceptible process...
Journal Article
A receptor state space model of the insulin signalling system in glucose transport
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Catheryn W. Gray and Adelle C.F. Coster
Mathematical Medicine and Biology: A Journal of the IMA, Volume 32, Issue 4, 1 December 2015, Pages 457–473, https://doi.org/10.1093/imammb/dqv003
Published: 10 February 2015
... ordinary differential equations (ODEs), it is the most comprehensive model of insulin signalling to date. However, the model possesses some major limitations, including the non-conservation of key components. In the current work, we detail mathematical and sensitivity analyses of the Sedaghat model. Based...
Journal Article
Mathematical modelling of cytokine-mediated inflammation in rheumatoid arthritis
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Michelle Baker and others
Mathematical Medicine and Biology: A Journal of the IMA, Volume 30, Issue 4, December 2013, Pages 311–337, https://doi.org/10.1093/imammb/dqs026
Published: 20 September 2012
... regimen as well as the dose level are important
factors in RA treatments.
Keywords: ODE; mathematical modelling; cytokines; rheumatoid arthritis; pro-inflammatory;
anti-inflammatory.
1. Introduction
Rheumatoid arthritis (RA) is a chronic inflammatory joint disease that affects around 1...
Journal Article
Taming the complexity of biological pathways through parallel computing
Paolo Ballarini and others
Briefings in Bioinformatics, Volume 10, Issue 3, May 2009, Pages 278–288, https://doi.org/10.1093/bib/bbp020
Published: 01 April 2009
... reserved keywords into the program source. Since the middle of the 1980s, there have been significant efforts in designing efficient numerical techniques for ODE solution exploiting parallel and distributed architectures. In the following, we sketch the possible techniques together with pointers to some...
Journal Article
Control of invasive hosts by generalist parasitoids
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Christelle Magal and others
Mathematical Medicine and Biology: A Journal of the IMA, Volume 25, Issue 1, March 2008, Pages 1–20, https://doi.org/10.1093/imammb/dqm011
Published: 28 April 2008
... promotes coexistence by enabling hosts to escape. ODE PDE invasion process biological control host–parasitoid system generalist parasitoid apparent competition Mathematical Medicine and Biology (2008) 25, 1 20
doi:10.1093/imammb/dqm011 −
Advance Access publication on April 28, 2008...
Journal Article
Electronic Data Sources for Kinetic Models of Cell Signaling
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G. V. HarshaRani and others
The Journal of Biochemistry, Volume 137, Issue 6, Jun. 2005, Pages 653–657, https://doi.org/10.1093/jb/mvi083
Published: 01 June 2005
... Format iHOP, Information Hyperlinked over Proteins JPEG, Joint Photographic Experts Group JWS, Java Web Simulation KDBI, Kinetic Data of Biomolecular Interactions KEGG, Kyoto Encyclopedia of Genes and Genomes MATLAB, Matrix Laboratory ODE, Ordinary Differential Equation PNG, Portable Network...
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