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Volume 38, Issue 11, November 2021
Fast Track
An Independent Evolutionary Origin for Insect Deterrent Cucurbitacins in Iberis amara
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4659–4673, https://doi.org/10.1093/molbev/msab213
Perspectives
Evolutionary Sparse Learning for Phylogenomics
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4674–4682, https://doi.org/10.1093/molbev/msab227
Discoveries
Genomic Evidence for Speciation with Gene Flow in Broadcast Spawning Marine Invertebrates
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4683–4699, https://doi.org/10.1093/molbev/msab194
An Analysis of Methylome Evolution in Primates
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4700–4714, https://doi.org/10.1093/molbev/msab189
Whole-Genome Duplication Facilitated the Evolution of C4 Photosynthesis in Gynandropsis gynandra
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4715–4731, https://doi.org/10.1093/molbev/msab200
Plastic Rewiring of Sef1 Transcriptional Networks and the Potential of Nonfunctional Transcription Factor Binding in Facilitating Adaptive Evolution
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4732–4747, https://doi.org/10.1093/molbev/msab192
DLX5/6 GABAergic Expression Affects Social Vocalization: Implications for Human Evolution
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4748–4764, https://doi.org/10.1093/molbev/msab181
Direct Molecular Evidence for an Ancient, Conserved Developmental Toolkit Controlling Posttranscriptional Gene Regulation in Land Plants
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4765–4777, https://doi.org/10.1093/molbev/msab201
Natural Selection Shapes Maintenance of Orthologous sRNAs in Divergent Host-Restricted Bacterial Genomes
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4778–4791, https://doi.org/10.1093/molbev/msab202
Mistranslation Reduces Mutation Load in Evolving Proteins through Negative Epistasis with DNA Mutations
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4792–4804, https://doi.org/10.1093/molbev/msab206
Highly Replicated Evolution of Parapatric Ecotypes
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4805–4821, https://doi.org/10.1093/molbev/msab207
Global Genetic Heterogeneity in Adaptive Traits
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4822–4831, https://doi.org/10.1093/molbev/msab208
Genome Analysis Traces Regional Dispersal of Rice in Taiwan and Southeast Asia
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4832–4846, https://doi.org/10.1093/molbev/msab209
Nemertean, Brachiopod, and Phoronid Neuropeptidomics Reveals Ancestral Spiralian Signaling Systems
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4847–4866, https://doi.org/10.1093/molbev/msab211
Two Reference-Quality Sea Snake Genomes Reveal Their Divergent Evolution of Adaptive Traits and Venom Systems
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4867–4883, https://doi.org/10.1093/molbev/msab212
Whole-Genome Sequencing Reveals Lactase Persistence Adaptation in European Dogs
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4884–4890, https://doi.org/10.1093/molbev/msab214
Sexual Antagonism, Temporally Fluctuating Selection, and Variable Dominance Affect a Regulatory Polymorphism in Drosophila melanogaster
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4891–4907, https://doi.org/10.1093/molbev/msab215
Genetic Continuity of Bronze Age Ancestry with Increased Steppe-Related Ancestry in Late Iron Age Uzbekistan
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4908–4917, https://doi.org/10.1093/molbev/msab216
Balancing Selection for Pathogen Resistance Reveals an Intercontinental Signature of Red Queen Coevolution
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4918–4933, https://doi.org/10.1093/molbev/msab217
Functional Evolution of a Bark Beetle Odorant Receptor Clade Detecting Monoterpenoids of Different Ecological Origins
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4934–4947, https://doi.org/10.1093/molbev/msab218
Comparative Analysis of Mammal Genomes Unveils Key Genomic Variability for Human Life Span
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4948–4961, https://doi.org/10.1093/molbev/msab219
Evolution of Renal-Disease Factor APOL1 Results in Cis and Trans Orientations at the Endoplasmic Reticulum That Both Show Cytotoxic Effects
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4962–4976, https://doi.org/10.1093/molbev/msab220
Defective Satellite DNA Clustering into Chromocenters Underlies Hybrid Incompatibility in Drosophila
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4977–4986, https://doi.org/10.1093/molbev/msab221
Genome-Wide SNPs Clarify a Complex Radiation and Support Recognition of an Additional Cat Species
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4987–4991, https://doi.org/10.1093/molbev/msab222
Endogenous Retroviruses Drive Lineage-Specific Regulatory Evolution across Primate and Rodent Placentae
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 4992–5004, https://doi.org/10.1093/molbev/msab223
An Ancient Clade of Penelope-Like Retroelements with Permuted Domains Is Present in the Green Lineage and Protists, and Dominates Many Invertebrate Genomes
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5005–5020, https://doi.org/10.1093/molbev/msab225
Novel Doublesex Duplication Associated with Sexually Dimorphic Development of Dogface Butterfly Wings
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5021–5033, https://doi.org/10.1093/molbev/msab228
Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus tremula L.)
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5034–5050, https://doi.org/10.1093/molbev/msab229
Human-Mediated Admixture and Selection Shape the Diversity on the Modern Swine (Sus scrofa) Y Chromosomes
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5051–5065, https://doi.org/10.1093/molbev/msab230
The Chicken Pan-Genome Reveals Gene Content Variation and a Promoter Region Deletion in IGF2BP1 Affecting Body Size
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5066–5081, https://doi.org/10.1093/molbev/msab231
RdRp or RT, That is the Question
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5082–5091, https://doi.org/10.1093/molbev/msab235
Coevolution between MHC Class I and Antigen-Processing Genes in Salamanders
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5092–5106, https://doi.org/10.1093/molbev/msab237
Papua New Guinean Genomes Reveal the Complex Settlement of North Sahul
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5107–5121, https://doi.org/10.1093/molbev/msab238
Is the Genetic Code Optimized for Resource Conservation?
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5122–5126, https://doi.org/10.1093/molbev/msab239
Little Evidence the Standard Genetic Code Is Optimized for Resource Conservation
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5127–5133, https://doi.org/10.1093/molbev/msab236
Fold Evolution before LUCA: Common Ancestry of SH3 Domains and OB Domains
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5134–5143, https://doi.org/10.1093/molbev/msab240
Noncoding Variation and Transcriptional Plasticity Promote Thermal Adaptation in Oysters by Altering Energy Metabolism
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5144–5155, https://doi.org/10.1093/molbev/msab241
Methods
An Extended Admixture Pulse Model Reveals the Limitations to Human–Neandertal Introgression Dating
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5156–5174, https://doi.org/10.1093/molbev/msab210
Evolution-Based Protein Engineering for Antifungal Peptide Improvement
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5175–5189, https://doi.org/10.1093/molbev/msab224
Refining Convergent Rate Analysis with Topology in Mammalian Longevity and Marine Transitions
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5190–5203, https://doi.org/10.1093/molbev/msab226
Resources
Orthology Clusters from Gene Trees with Possvm
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Pages 5204–5208, https://doi.org/10.1093/molbev/msab234
Corrigenda
Corrigendum to: Geonomics: Forward-Time, Spatially Explicit, and Arbitrarily Complex Landscape Genomic Simulations
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Page 5209, https://doi.org/10.1093/molbev/msab250
Corrigendum to: Evidence for Strong Mutation Bias toward, and Selection against, U Content in SARS-CoV-2: Implications for Vaccine Design
Molecular Biology and Evolution, Volume 38, Issue 11, November 2021, Page 5210, https://doi.org/10.1093/molbev/msab257
