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Section: Method Review
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Journal Article

Reconciling multiple connectivity scores for drug repurposing

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Kewalin Samart and others
Briefings in Bioinformatics, Volume 22, Issue 6, November 2021, bbab161, https://doi.org/10.1093/bib/bbab161
Published: 19 May 2021
Journal Article

Deep drug-target binding affinity prediction with multiple attention blocks

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Yuni Zeng and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab117, https://doi.org/10.1093/bib/bbab117
Published: 19 April 2021
Journal Article

Pharmacometabonomics: data processing and statistical analysis

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Jianbo Fu and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab138, https://doi.org/10.1093/bib/bbab138
Published: 19 April 2021
Journal Article

Comprehensive review and evaluation of computational methods for identifying FLT3-internal tandem duplication in acute myeloid leukaemia

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Danyang Yuan and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab099, https://doi.org/10.1093/bib/bbab099
Published: 13 April 2021
Journal Article

Machine learning approach to gene essentiality prediction: a review

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Olufemi Aromolaran and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab128, https://doi.org/10.1093/bib/bbab128
Published: 13 April 2021
Journal Article

Venn diagrams in bioinformatics

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Anqiang Jia and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab108, https://doi.org/10.1093/bib/bbab108
Published: 12 April 2021
Journal Article

Integrating multi-scale neighbouring topologies and cross-modal similarities for drug–protein interaction prediction

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Ping Xuan and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab119, https://doi.org/10.1093/bib/bbab119
Published: 12 April 2021
Journal Article

Reusability and composability in process description maps: RAS–RAF–MEK–ERK signalling

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Alexander Mazein and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab103, https://doi.org/10.1093/bib/bbab103
Published: 08 April 2021
Journal Article

A comprehensive review of the imbalance classification of protein post-translational modifications

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Lijun Dou and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab089, https://doi.org/10.1093/bib/bbab089
Published: 08 April 2021
Journal Article

Systematic benchmark of ancient DNA read mapping

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Adrien Oliva and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab076, https://doi.org/10.1093/bib/bbab076
Published: 08 April 2021
Journal Article

Parallel computing for genome sequence processing

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You Zou and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab070, https://doi.org/10.1093/bib/bbab070
Published: 05 April 2021
Journal Article

Critical downstream analysis steps for single-cell RNA sequencing data

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Zilong Zhang and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab105, https://doi.org/10.1093/bib/bbab105
Published: 05 April 2021
Journal Article

Machine learning for phytopathology: from the molecular scale towards the network scale

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Yansu Wang and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab037, https://doi.org/10.1093/bib/bbab037
Published: 31 March 2021
Journal Article

On the limits of active module identification

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Olga Lazareva and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab066, https://doi.org/10.1093/bib/bbab066
Published: 29 March 2021
Journal Article

Advances in bulk and single-cell multi-omics approaches for systems biology and precision medicine

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Yunjin Li and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab024, https://doi.org/10.1093/bib/bbab024
Published: 27 March 2021
Journal Article

Comprehensive assessment of machine learning-based methods for predicting antimicrobial peptides

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Jing Xu and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab083, https://doi.org/10.1093/bib/bbab083
Published: 27 March 2021
Journal Article

Inflated false discovery rate due to volcano plots: problem and solutions

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Mitra Ebrahimpoor and Jelle J Goeman
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab053, https://doi.org/10.1093/bib/bbab053
Published: 24 March 2021
Journal Article

A map of mass spectrometry-based in silico fragmentation prediction and compound identification in metabolomics

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Christoph A Krettler and Gerhard G Thallinger
Briefings in Bioinformatics, Volume 22, Issue 6, November 2021, bbab073, https://doi.org/10.1093/bib/bbab073
Published: 24 March 2021
Journal Article

Genome-resolved metagenomics using environmental and clinical samples

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Masood ur Rehman Kayani and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab030, https://doi.org/10.1093/bib/bbab030
Published: 24 March 2021
Journal Article

MicroRNA annotation in plants: current status and challenges

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Yongxin Zhao and others
Briefings in Bioinformatics, Volume 22, Issue 5, September 2021, bbab075, https://doi.org/10.1093/bib/bbab075
Published: 23 March 2021