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Authors: Yoshihide Hayashizaki
Journal Article
FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs Open Access
Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D892–D898, https://doi.org/10.1093/nar/gkaa1054
Published: 19 November 2020
Journal Article
Integration of genetics and miRNA–target gene network identified disease biology implicated in tissue specificity Open Access
Nucleic Acids Research, Volume 46, Issue 22, 14 December 2018, Pages 11898–11909, https://doi.org/10.1093/nar/gky1066
Published: 08 November 2018
Journal Article
Update of the FANTOM web resource: expansion to provide additional transcriptome atlases Open Access
Nucleic Acids Research, Volume 47, Issue D1, 08 January 2019, Pages D752–D758, https://doi.org/10.1093/nar/gky1099
Published: 08 November 2018
Journal Article
Update of the FANTOM web resource: high resolution transcriptome of diverse cell types in mammals Open Access
Nucleic Acids Research, Volume 45, Issue D1, January 2017, Pages D737–D743, https://doi.org/10.1093/nar/gkw995
Published: 27 October 2016
Journal Article
Functional annotation of the vlinc class of non-coding RNAs using systems biology approach Open Access
Nucleic Acids Research, Volume 44, Issue 7, 20 April 2016, Pages 3233–3252, https://doi.org/10.1093/nar/gkw162
Published: 21 March 2016
Journal Article
Redefining the transcriptional regulatory dynamics of classically and alternatively activated macrophages by deepCAGE transcriptomics Open Access
Nucleic Acids Research, Volume 43, Issue 14, 18 August 2015, Pages 6969–6982, https://doi.org/10.1093/nar/gkv646
Published: 27 June 2015
Journal Article
Complementing tissue characterization by integrating transcriptome profiling from the Human Protein Atlas and from the FANTOM5 consortium Open Access
Nucleic Acids Research, Volume 43, Issue 14, 18 August 2015, Pages 6787–6798, https://doi.org/10.1093/nar/gkv608
Published: 27 June 2015
Journal Article
CAGEr: precise TSS data retrieval and high-resolution promoterome mining for integrative analyses Open Access
Nucleic Acids Research, Volume 43, Issue 8, 30 April 2015, Page e51, https://doi.org/10.1093/nar/gkv054
Published: 04 February 2015
Journal Article
A transient disruption of fibroblastic transcriptional regulatory network facilitates trans-differentiation Open Access
Nucleic Acids Research, Volume 42, Issue 14, 18 August 2014, Pages 8905–8913, https://doi.org/10.1093/nar/gku567
Published: 10 July 2014
Journal Article
Establishment of single-cell screening system for the rapid identification of transcriptional modulators involved in direct cell reprogramming Open Access
Nucleic Acids Research, Volume 40, Issue 21, 1 November 2012, Page e165, https://doi.org/10.1093/nar/gks732
Published: 08 August 2012
Journal Article
pre-miRNA profiles obtained through application of locked nucleic acids and deep sequencing reveals complex 5′/3′ arm variation including concomitant cleavage and polyuridylation patterns Open Access
Nucleic Acids Research, Volume 40, Issue 4, 1 February 2012, Pages 1424–1437, https://doi.org/10.1093/nar/gkr903
Published: 03 November 2011
Journal Article
Optimization of turn-back primers in isothermal amplification Open Access
Nucleic Acids Research, Volume 39, Issue 9, 1 May 2011, Page e59, https://doi.org/10.1093/nar/gkr041
Published: 09 February 2011
Journal Article
The RIKEN integrated database of mammals Open Access
Nucleic Acids Research, Volume 39, Issue suppl_1, 1 January 2011, Pages D861–D870, https://doi.org/10.1093/nar/gkq1078
Published: 13 November 2010
Journal Article
Update of the FANTOM web resource: from mammalian transcriptional landscape to its dynamic regulation Open Access
Nucleic Acids Research, Volume 39, Issue suppl_1, 1 January 2011, Pages D856–D860, https://doi.org/10.1093/nar/gkq1112
Published: 11 November 2010
Journal Article
Building promoter aware transcriptional regulatory networks using siRNA perturbation and deepCAGE Open Access
Nucleic Acids Research, Volume 38, Issue 22, 1 December 2010, Pages 8141–8148, https://doi.org/10.1093/nar/gkq729
Published: 19 August 2010
Journal Article
Identification of an inter-transcription factor regulatory network in human hepatoma cells by Matrix RNAi Open Access
Nucleic Acids Research, Volume 37, Issue 4, 1 March 2009, Pages 1049–1060, https://doi.org/10.1093/nar/gkn1028
Published: 07 January 2009
Journal Article
Identification of DNA regions and a set of transcriptional regulatory factors involved in transcriptional regulation of several human liver-enriched transcription factor genes Open Access
Nucleic Acids Research, Volume 37, Issue 3, 1 February 2009, Pages 778–792, https://doi.org/10.1093/nar/gkn978
Published: 15 December 2008
Journal Article
The RRM domain of poly(A)-specific ribonuclease has a noncanonical binding site for mRNA cap analog recognition Open Access
Nucleic Acids Research, Volume 36, Issue 14, 1 August 2008, Pages 4754–4767, https://doi.org/10.1093/nar/gkn458
Published: 19 July 2008
Journal Article
Identification of transcriptional regulatory cascades in retinoic acid-induced growth arrest of HepG2 cells Open Access
Nucleic Acids Research, Volume 36, Issue 10, 1 June 2008, Pages 3443–3454, https://doi.org/10.1093/nar/gkn066
Published: 29 April 2008
Journal Article
A RecA-mediated exon profiling method Open Access
Nucleic Acids Research, Volume 34, Issue 13, 1 August 2006, Page e97, https://doi.org/10.1093/nar/gkl497
Published: 01 January 2006
