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Keywords: dynamical systems
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Journal Article
Transfer operators from batches of unpaired points via entropic transport kernels
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Florian Beier and others
Information and Inference: A Journal of the IMA, Volume 14, Issue 2, June 2025, iaaf005, https://doi.org/10.1093/imaiai/iaaf005
Published: 02 April 2025
... by a modification of the expectation maximization maximum likelihood algorithm to take additional transition probability constraints into account and prove the convergence of this algorithm. Proof-of-concept examples demonstrate the potential of our method. dynamical systems maximum likelihood estimation entropic...
Journal Article
Classification and spatiotemporal correlation of dominant fluctuations in complex dynamical systems Open Access
Cristina Caruso and others
in
PNAS Nexus
PNAS Nexus, Volume 4, Issue 2, February 2025, pgaf038, https://doi.org/10.1093/pnasnexus/pgaf038
Published: 07 February 2025
... approach that can reveal precious information on the physics of a variety of complex dynamical systems starting solely from the trajectories of their constitutive units. Built on a bivariate combination of two abstract descriptors, Local Environments and Neighbors Shuffling and TimeSmooth Overlap...
Journal Article
EDITOR'S CHOICE
Bayesian hierarchical modeling and inference for mechanistic systems in industrial hygiene
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Soumyakanti Pan and others
Annals of Work Exposures and Health, Volume 68, Issue 8, October 2024, Pages 834–845, https://doi.org/10.1093/annweh/wxae061
Published: 24 July 2024
... relevance to environmental hygienists and public health researchers working on assessing the performance of aerosol removal rates for rail car fleets. Bayesian inference differential equations dynamical systems industrial hygiene mechanistic systems melding state-space models National Institute...
Journal Article
Dynamic models augmented by hierarchical data: an application of estimating HIV epidemics at sub-national level Open Access
Bao Le and others
Biostatistics, Volume 25, Issue 4, October 2024, Pages 1049–1061, https://doi.org/10.1093/biostatistics/kxae003
Published: 29 February 2024
...Bao Le; Xiaoyue Niu; Tim Brown; Jeffrey W Imai-Eaton dynamical systems hierarchical model HIV epidemics Joint United Nations Programme National Institutes of Health 10.13039/100000002 National Institute of Allergy and Infectious Diseases 10.13039/100000060 R01AI136664...
Journal Article
Gradualism, bifurcation and fading qualia
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Miguel Ángel Sebastián and Manolo Martínez
in
Analysis
Analysis, Volume 84, Issue 2, April 2024, Pages 301–310, https://doi.org/10.1093/analys/anad050
Published: 10 February 2024
... phenomena on which it depends. These assumptions, while strictly correct if the dependence relation in question can be expressed by continuous dynamical equations, should be handled with care: very often the descriptively relevant property of a dynamical system connecting high- and low-level phenomena...
Journal Article
Analysis of point-contact models of the bounce of a hard spinning ball on a compliant frictional surface Open Access
Stanisław W Biber and others
IMA Journal of Applied Mathematics, Volume 88, Issue 3, June 2023, Pages 498–523, https://doi.org/10.1093/imamat/hxad020
Published: 02 August 2023
... that lift off with backspin from those that lift off with topspin. The results are compared with recent experimental measurements on golf ball bounce and the theory is shown to capture the main features of the data. Coulomb friction Piecewise-smooth dynamical systems Impact mechanics EPSRC Doctoral...
Journal Article
A unifying view of modal clustering
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Ery Arias-Castro and Wanli Qiao
Information and Inference: A Journal of the IMA, Volume 12, Issue 2, June 2023, Pages 897–920, https://doi.org/10.1093/imaiai/iaac030
Published: 01 December 2022
...—each one of them very natural in its own right—and showing that both of them reduce to the partition given by the gradient flow under standard assumptions on the sampling density. clustering level sets cluster tree gradient lines gradient flow MeanShift algorithm dynamical systems ordinary...
Journal Article
Source-sink connectivity: a novel interictal EEG marker for seizure localization Purchased
Kristin M Gunnarsdottir and others
in
Brain
Brain, Volume 145, Issue 11, November 2022, Pages 3901–3915, https://doi.org/10.1093/brain/awac300
Published: 21 November 2022
Journal Article
Accurate characterization of dynamic microbial gene expression and growth rate profiles Open Access
Gonzalo Vidal and others
Synthetic Biology, Volume 7, Issue 1, 2022, ysac020, https://doi.org/10.1093/synbio/ysac020
Published: 15 October 2022
..., which may be divided into cellular and compositional contexts. Inverse problem characterization dynamical systems web application gene expression Abstract Genetic circuits are subject to variability due to cellular and compositional contexts. Cells face changing internal states and environments...
Journal Article
Containing novel SARS-CoV-2 variants at source is possible with high-intensity sequencing Open Access
Tobias S Brett and Pejman Rohani
in
PNAS Nexus
PNAS Nexus, Volume 1, Issue 4, September 2022, pgac159, https://doi.org/10.1093/pnasnexus/pgac159
Published: 19 August 2022
... and dissemination is prompt. infectious diseases mathematical modeling dynamical systems National Institutes of Health 10.13039/100000002 National Institute of Allergy and Infectious Diseases 10.13039/100000060 Eq. ( 1 ) also reveals that, in general, variant identification occurs first in sequence data...
Journal Article
Reconstruction of cascading failures in dynamical models of power grids
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Alessandra Corso and others
Journal of Complex Networks, Volume 10, Issue 4, August 2022, cnac035, https://doi.org/10.1093/comnet/cnac035
Published: 08 August 2022
... error and temporal resolution of the active link reconstruction. networks of dynamical systems power grids network reconstruction cascading failures Italian Ministry for Research and Education 2017CWMF93 Given the fundamental relationship between connectivity and dynamics, the problem...
Journal Article
BioCro II: a software package for modular crop growth simulations Open Access
Edward B Lochocki and others
in silico Plants, Volume 4, Issue 1, 2022, diac003, https://doi.org/10.1093/insilicoplants/diac003
Published: 12 February 2022
.... Several crop models have been implemented using the BioCro II framework, but it is a general purpose tool and can be used to model a wide variety of processes. Dynamical systems mechanistic crop growth simulation modular modelling multiscale modelling Bill and Melinda Gates Foundation 10.13039...
Journal Article
Harvesting random embedding for high-frequency change-point detection in temporal complex systems Open Access
Jia-Wen Hou and others
National Science Review, Volume 9, Issue 4, April 2022, nwab228, https://doi.org/10.1093/nsr/nwab228
Published: 27 December 2021
... merely on the observational time series. For the sake of self-consistence of this work, we hereby review this framework [ 23 ]. Let denote a time series of m states generated by an n-dimensional dynamical system (abbreviated as ) and be one of the interested target elements...
Journal Article
Data-driven dynamics of phytoplankton blooms in a reaction–diffusion NPZ model Purchased
Seth T Cowall and others
Journal of Plankton Research, Volume 43, Issue 5, September/October 2021, Pages 642–657, https://doi.org/10.1093/plankt/fbab051
Published: 28 August 2021
...Seth T Cowall; Matthew J Oliver; L Pamela Cook; Pia Moisander NPZ models phytoplankton blooms dynamical systems stability saddle points diffusion mixed layer depth solar radiation University of Delaware Department of Mathematical Sciences where (4) and being the unique solution...
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Journal Article
Random matrices and controllability of dynamical systems Open Access
John Leventides and others
IMA Journal of Mathematical Control and Information, Volume 39, Issue 2, June 2022, Pages 371–382, https://doi.org/10.1093/imamci/dnab011
Published: 05 May 2021
... the usual matrices have been replaced by random matrices. We also estimate the -uncontrollability in the case where the matrices come from the Gaussian orthogonal ensemble. Our proof utilizes tools from systems theory, probability theory and convex geometry. controllability of dynamical systems random...
Journal Article
A discrete dynamics approach to interbank financial contagion Open Access
John Leventides and others
IMA Journal of Mathematical Control and Information, Volume 39, Issue 2, June 2022, Pages 409–442, https://doi.org/10.1093/imamci/dnab007
Published: 26 April 2021
... network for the research of financial contagion. The mathematical description we present is in terms of Boolean dynamical systems and a linear operator. We relate the properties of the dynamical systems to the properties of the operator. interbank networks financial contagion systemic risk complex...
Journal Article
Individual Alpha Frequency Determines the Impact of Bottom-Up Drive on Visual Processing Open Access
Stephanie Nelli and others
Cerebral Cortex Communications, Volume 2, Issue 2, 2021, tgab032, https://doi.org/10.1093/texcom/tgab032
Published: 26 April 2021
...-up drive and endogenous oscillations on behavior. alpha oscillations dynamical systems electroencephalography visual perception For the continuous drive task version, a response was considered a correct detection (a “hit”) if it occurred from 84 to 1000 ms after a target. Any response made...
Journal Article
Empirical risk minimization for dynamical systems and stationary processes
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Kevin McGoff and Andrew B Nobel
Information and Inference: A Journal of the IMA, Volume 10, Issue 3, September 2021, Pages 1073–1104, https://doi.org/10.1093/imaiai/iaaa043
Published: 04 February 2021
... and models of interest may be stationary systems or processes. Within the framework, which is presented in terms of dynamical systems, empirical risk minimization can be studied as a two-step procedure in which (i) the trajectory of an observed (but unknown) system is fit by a trajectory of a known reference...
Journal Article
Convergence, continuity, recurrence and Turing completeness in dynamic epistemic logic
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Dominik Klein and Rasmus K Rendsvig
Journal of Logic and Computation, Volume 30, Issue 6, September 2020, Pages 1213–1238, https://doi.org/10.1093/logcom/exaa035
Published: 21 July 2020
... constitute a model of information dynamics or be may be analysed purely for its mathematical properties [ 6 , 8 , 10 , 11 , 13 , 16 , 18 , 42–45 , 47 ]. Dynamical systems theory is a mathematical field studying the long-term behaviour of spaces under the action of a continuous function. In case...
Journal Article
Large-Scale Communication is More Complex and Unpredictable with Automated Bots
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Martin Hilbert and David Darmon
Journal of Communication, Volume 70, Issue 5, October 2020, Pages 670–692, https://doi.org/10.1093/joc/jqaa021
Published: 29 June 2020
... to approach dynamical systems theory from the perspective of Shannon’s “mathematical theory of communication” ( 1948 ), aka information theory ( Cover & Thomas, 2006 ). Information theory is a branch of probability theory that conceptualizes information as the opposite of probabilistic uncertainty...