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Volume 21, Issue 4, July 2020
MENDA: a comprehensive curated resource of metabolic characterization in depression
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1455–1464, https://doi.org/10.1093/bib/bbz055
RNA-mediated translation regulation in viral genomes: computational advances in the recognition of sequences and structures
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1151–1163, https://doi.org/10.1093/bib/bbz054
iCircDA-MF: identification of circRNA-disease associations based on matrix factorization
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1356–1367, https://doi.org/10.1093/bib/bbz057
A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1119–1135, https://doi.org/10.1093/bib/bbz051
Comparative assessment of long-read error correction software applied to Nanopore RNA-sequencing data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1164–1181, https://doi.org/10.1093/bib/bbz058
Systematic analysis of supervised machine learning as an effective approach to predicate β-lactam resistance phenotype in Streptococcus pneumoniae
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1347–1355, https://doi.org/10.1093/bib/bbz056
A critical assessment of the feature selection methods used for biomarker discovery in current metaproteomics studies
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1378–1390, https://doi.org/10.1093/bib/bbz061
Sepsis in the era of data-driven medicine: personalizing risks, diagnoses, treatments and prognoses
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1182–1195, https://doi.org/10.1093/bib/bbz059
An overview of diffusion models for intracellular dynamics analysis
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1136–1150, https://doi.org/10.1093/bib/bbz052
Mitochondrial DNA enrichment reduced NUMT contamination in porcine NGS analyses
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1368–1377, https://doi.org/10.1093/bib/bbz060
Machine learning and statistical methods for clustering single-cell RNA-sequencing data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1209–1223, https://doi.org/10.1093/bib/bbz063
Data-driven rational biosynthesis design: from molecules to cell factories
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1238–1248, https://doi.org/10.1093/bib/bbz065
Genome-wide functional association networks: background, data & state-of-the-art resources
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1224–1237, https://doi.org/10.1093/bib/bbz064
A survey on identification and quantification of alternative polyadenylation sites from RNA-seq data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1261–1276, https://doi.org/10.1093/bib/bbz068
Data imbalance in CRISPR off-target prediction
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1448–1454, https://doi.org/10.1093/bib/bbz069
A critical review of five machine learning-based algorithms for predicting protein stability changes upon mutation
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1285–1292, https://doi.org/10.1093/bib/bbz071
Closing the gap between formats for storing layout information in systems biology
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1249–1260, https://doi.org/10.1093/bib/bbz067
Simultaneous Enrichment Analysis of all Possible Gene-sets: Unifying Self-Contained and Competitive Methods
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1302–1312, https://doi.org/10.1093/bib/bbz074
Clustering and classification methods for single-cell RNA-sequencing data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1196–1208, https://doi.org/10.1093/bib/bbz062
Consistency and overfitting of multi-omics methods on experimental data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1277–1284, https://doi.org/10.1093/bib/bbz070
Some comments on certain statistical aspects of the study of the microbiome
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1487–1494, https://doi.org/10.1093/bib/bbz077
HiFreSP: A novel high-frequency sub-pathway mining approach to identify robust prognostic gene signatures
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1411–1424, https://doi.org/10.1093/bib/bbz078
Location deviations of DNA functional elements affected SNP mapping in the published databases and references
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1293–1301, https://doi.org/10.1093/bib/bbz073
Circulating microRNA trafficking and regulation: computational principles and practice
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1313–1326, https://doi.org/10.1093/bib/bbz079
Protein functional annotation of simultaneously improved stability, accuracy and false discovery rate achieved by a sequence-based deep learning
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1437–1447, https://doi.org/10.1093/bib/bbz081
New insights on human essential genes based on integrated analysis and the construction of the HEGIAP web-based platform
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1397–1410, https://doi.org/10.1093/bib/bbz072
A comprehensive method protocol for annotation and integrated functional understanding of lncRNAs
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1391–1396, https://doi.org/10.1093/bib/bbz066
Critical microRNAs and regulatory motifs in cleft palate identified by a conserved miRNA–TF–gene network approach in humans and mice
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1465–1478, https://doi.org/10.1093/bib/bbz082
Predicting disease-associated circular RNAs using deep forests combined with positive-unlabeled learning methods
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1425–1436, https://doi.org/10.1093/bib/bbz080
Heterogeneous information network and its application to human health and disease
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1327–1346, https://doi.org/10.1093/bib/bbz091
MutEx: a multifaceted gateway for exploring integrative pan-cancer genomic data
Briefings in Bioinformatics, Volume 21, Issue 4, July 2020, Pages 1479–1486, https://doi.org/10.1093/bib/bbz084
