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Keywords: principal component analysis
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Journal Article
Modeling and Forecasting Serially Dependent Yield Curves
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Hao Li
Journal of Financial Econometrics, Volume 23, Issue 3, 2025, nbaf012, https://doi.org/10.1093/jjfinec/nbaf012
Published: 30 April 2025
... forecasting results. autocovariance dimension reduction factor model functional principal component analysis term structure yield curve C1 C5 E4 G1 Fundamental Research Funds for the Central Universities 10.13039/501100012226 63232103 660041 To model a yield curve that is a collection of yields...
Journal Article
Gait and balance metrics comparison among different fall risk groups and principal component analysis for fall prediction in older people
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Lulu Yin and others
Age and Ageing, Volume 54, Issue 4, April 2025, afaf076, https://doi.org/10.1093/ageing/afaf076
Published: 08 April 2025
... variability, complexity, intensity, symmetry and magnitude [ 14 ]. These datasets are often large, nonlinear and highly correlated, posing challenges in selecting feature variables that reflected fall risk during subsequent regression prediction [ 1 ]. In this context, principal component analysis (PCA...
Journal Article
Semiparametric mixture regression for asynchronous longitudinal data using multivariate functional principal component analysis
Ruihan Lu and others
Biostatistics, Volume 26, Issue 1, 2025, kxaf008, https://doi.org/10.1093/biostatistics/kxaf008
Published: 22 March 2025
... structure within the aging female population, shedding light on important distinctions and patterns among women undergoing menopause. EM algorithm functional data functional principal component analysis mixture regression splines subgroup analysis US National Institutes of Health 10.13039/100000002...
Journal Article
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Characterization of Dynamic Adaptation to Stressors using Multi-System Stimulus-Response Data: The Study of Physical Resilience in Aging Pilot
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Karen Bandeen-Roche and others
The Journals of Gerontology: Series A, glaf056, https://doi.org/10.1093/gerona/glaf056
Published: 15 March 2025
..., and repeated diurnal salivary cortisol assessment in the SPRING pilot (n=79). Principal component analysis was applied anticipating steady-state and “adaptation” mechanisms underlying the repeated physiological measures. Analytic features evidenced these mechanisms, supporting construct validity. Component...
Journal Article
Measuring linkage disequilibrium and improvement of pruning and clumping in structured populations
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Ulises Bercovich and others
in
Genetics
Genetics, Volume 229, Issue 3, March 2025, iyaf009, https://doi.org/10.1093/genetics/iyaf009
Published: 05 February 2025
... that are not in LD in the ancestral populations. Using data from moderately differentiated human populations and highly differentiated giraffe populations we show that traditional LD pruning biases F ST and principal component analysis (PCA), which can be alleviated with the adjusted LD measure...
Journal Article
Prediction of Pellet Durability Index in a commercial feed mill using multiple linear regression with variable selection and dimensionality reduction
Jihao You and others
Journal of Animal Science, Volume 103, 2025, skaf021, https://doi.org/10.1093/jas/skaf021
Published: 04 February 2025
... into the transformed response variable (tPDI), which was more normally distributed. Three multiple regression models were developed based on subsets of variables processed by variable selection and dimensionality reduction methods: Forward Selection, Principal Component Analysis, and Partial Least Squares. The results...
Journal Article
Differentially private low-dimensional synthetic data from high-dimensional datasets
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Yiyun He and others
Information and Inference: A Journal of the IMA, Volume 14, Issue 1, March 2025, iaae034, https://doi.org/10.1093/imaiai/iaae034
Published: 16 January 2025
..., we propose a differentially private algorithm to generate low-dimensional synthetic data efficiently from a high-dimensional dataset with a utility guarantee with respect to the Wasserstein distance. A key step of our algorithm is a private principal component analysis (PCA) procedure with a near...
Journal Article
High-dimensional partially linear functional Cox models
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Xin Chen and others
in
Biometrics
Biometrics, Volume 81, Issue 1, March 2025, ujae164, https://doi.org/10.1093/biomtc/ujae164
Published: 14 January 2025
...-spline functional principal component analysis long-term survival analysis non-linear effect National Natural Science Foundation of China 10.13039/501100001809 11971291 12001371 12201487 Shanghai Sailing Program 20YF1434200 China Postdoctoral Science Foundation 10.13039...
Journal Article
GenoTools: an open-source Python package for efficient genotype data quality control and analysis
Dan Vitale and others
G3 Genes|Genomes|Genetics, Volume 15, Issue 1, January 2025, jkae268, https://doi.org/10.1093/g3journal/jkae268
Published: 20 November 2024
... with reproducible and scalable ancestry, quality control, and genome-wide association studies pipelines. python genotype ancestry principal component analysis (PCA) Uniform Manifold Approximation and Projection (UMAP) Intramural Research Program of the NIH National Institute on Aging 10.13039/100000049...
Journal Article
Model-Fitting Weighted Least Squares as an Alternative to Principal Component Analysis for Analyzing Energy-Dispersive X-ray Spectroscopy Spectrum Images
David Wahlqvist and Martin Ek
Microscopy and Microanalysis, Volume 31, Issue 1, February 2025, ozae106, https://doi.org/10.1093/mam/ozae106
Published: 14 November 2024
... methods, commonly principal component analysis (PCA), are often used to aid analysis of the resulting multidimensional datasets; PCA can provide denoising prior to further analysis or grouping of pixels into distinct phases with similar signals. However, it is well known that PCA can introduce artifacts...
Journal Article
Modeling longitudinal skewed functional data
Mohammad Samsul Alam and Ana-Maria Staicu
in
Biometrics
Biometrics, Volume 80, Issue 4, December 2024, ujae121, https://doi.org/10.1093/biomtc/ujae121
Published: 30 October 2024
... based on functional principal component analysis. In many situations, these methods effectively capture the variability in the data. However, when pointwise distributions exhibit skewness or other higher-order characteristics that vary across the function domain, the applicability of these methods...
Journal Article
Improved algorithm for fracture-dissolution pore detection in resistivity imaging logging based on dung beetle optimization
Zuomin Zhu and others
Journal of Geophysics and Engineering, Volume 21, Issue 6, December 2024, Pages 1748–1763, https://doi.org/10.1093/jge/gxae103
Published: 28 October 2024
..., and pore shape factor for identified targets. Additionally, principal component analysis is used to derive recognition factors for fractures and dissolution pores. Applications show that this factor can identify matrix, fracture, and dissolution pore targets in complex background images. By combining...
Journal Article
Chemometric classification of Vietnamese green tea (Camellia sinensis) varieties and origins using elemental profiling and FTIR spectroscopy
Truong Ngoc Minh and others
International Journal of Food Science and Technology, Volume 59, Issue 12, December 2024, Pages 9234–9244, https://doi.org/10.1111/ijfs.17538
Published: 13 September 2024
.... The FTIR spectra exhibited characteristic peaks, denoting the functional groups of the potential compounds present. ICP/MS analysis identified the presence of 14 elements in the tea samples, revealing significant variations in content across the four varieties. principal component analysis (PCA...
Journal Article
493 Predicting pellet quality using multiple linear regression with Principal Component Analysis (PCA)
Jihao You and others
Journal of Animal Science, Volume 102, Issue Supplement_3, September 2024, Pages 154–155, https://doi.org/10.1093/jas/skae234.182
Published: 13 September 2024
... performance of the model. The response variable (PDI) was transformed (tPDI) using the Box-Cox method to meet a normal distribution assumption. To avoid multicollinearity, Principal Component Analysis (PCA) was used to reduce the dimensionality of the numeric factors before building the multiple linear...
Journal Article
221 Multivariate statistics as a quick tool to screen perennial forages for forage value
Blasius N Azuhnwi and Akim Omokanye
Journal of Animal Science, Volume 102, Issue Supplement_3, September 2024, Pages 184–185, https://doi.org/10.1093/jas/skae234.216
Published: 13 September 2024
...Blasius N Azuhnwi; Akim Omokanye forage value perennial forages principal component analysis Abstract Perennial forages seeded as straight grasses and legumes or in mixtures make a valuable contribution as feed for the beef cattle industry in Alberta. With new varieties constantly being released...
Journal Article
Mode-wise principal subspace pursuit and matrix spiked covariance model
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Runshi Tang and others
Journal of the Royal Statistical Society Series B: Statistical Methodology, Volume 87, Issue 1, February 2025, Pages 232–255, https://doi.org/10.1093/jrsssb/qkae088
Published: 02 September 2024
... average projection operator dimensionality reduction mode-wise principal subspace pursuit principal component analysis NSF 10.13039/100000001 DMS-2015285 DMS-2052955 CAREER-2203741 NIH 10.13039/100000002 R01HL169347 R01HL168940 In modern scientific applications, data are often...
Journal Article
Spiny dogfish, Squalus suckleyi, shows a good tolerance for hypoxia but need long recovery times
Gudrun De Boeck and others
Conservation Physiology, Volume 12, Issue 1, 2024, coae054, https://doi.org/10.1093/conphys/coae054
Published: 13 August 2024
... metabolomics recovery shark Abbreviations: PCA principal component analysis TMAO trimethylamine oxide NSERC Discovery Grants RGPIN 473–2012 and RGPIN-2017-03843 Research Council of the University of Antwerp Environmental hypoxia occurs in coastal and open ocean marine ecosystems and varies both...
Journal Article
Difference in Gastrointestinal Cancer Risk and Mortality by Dietary Pattern Analysis: A Systematic Review and Meta-Analysis
Zegeye Abebe and others
Nutrition Reviews, Volume 83, Issue 3, March 2025, Pages e991–e1013, https://doi.org/10.1093/nutrit/nuae090
Published: 17 July 2024
... principal component analysis (PCA) and reduced rank regression (RRR), and GI cancer risk and GI cancer–caused mortality. Data Source Articles published up to June 2023 in English were eligible for inclusion. The Medline, SCOPUS, Cochrane Library, CINHAL, PsycINFO, ProQuest, and Web of Sciences databases...
Journal Article
The interictal suppression hypothesis is the dominant differentiator of seizure onset zones in focal epilepsy
Derek J Doss and others
in
Brain
Brain, Volume 147, Issue 9, September 2024, Pages 3009–3017, https://doi.org/10.1093/brain/awae189
Published: 14 June 2024
... that outperforms the ISH. Resting-state SEEG data from 81 patients with drug-resistant epilepsy undergoing a pre-surgical evaluation at Vanderbilt University Medical Center were collected. Directed connectivity matrices were computed using the alpha band (8–13 Hz). Principal component analysis (PCA) was performed...
Journal Article
Dual-energy computed tomography iodine quantification combined with laboratory data for predicting microvascular invasion in hepatocellular carcinoma: a two-centre study
Huan Li and others
British Journal of Radiology, Volume 97, Issue 1160, August 2024, Pages 1467–1475, https://doi.org/10.1093/bjr/tqae116
Published: 13 June 2024
... and laboratory findings between MVI-negative and MVI-positive groups, Mann-Whitney U test was used. Additionally, principal component analysis (PCA) was conducted to determine fundamental components. Mann-Whitney U test was applied to determine whether the principal component (PC) scores varied...
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