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Volume 3, Issue 1, December 2023
Article
Horizontal metaproteomics and CAZymes analysis of lignocellulolytic microbial consortia selectively enriched from cow rumen and termite gut
ISME Communications, Volume 3, Issue 1, December 2023, 134, https://doi.org/10.1038/s43705-023-00339-0
Microbial phosphorus recycling in soil by intra- and extracellular mechanisms
ISME Communications, Volume 3, Issue 1, December 2023, 135, https://doi.org/10.1038/s43705-023-00340-7
Distribution and genomic variation of ammonia-oxidizing archaea in abyssal and hadal surface sediments
ISME Communications, Volume 3, Issue 1, December 2023, 133, https://doi.org/10.1038/s43705-023-00341-6
Benthic microbial biogeographic trends in the North Sea are shaped by an interplay of environmental drivers and bottom trawling effort
ISME Communications, Volume 3, Issue 1, December 2023, 132, https://doi.org/10.1038/s43705-023-00336-3
Carbohydrates and carbohydrate degradation gene abundance and transcription in Atlantic waters of the Arctic
ISME Communications, Volume 3, Issue 1, December 2023, 130, https://doi.org/10.1038/s43705-023-00324-7
Zea mays genotype influences microbial and viral rhizobiome community structure
ISME Communications, Volume 3, Issue 1, December 2023, 129, https://doi.org/10.1038/s43705-023-00335-4
Microbial gene expression analysis of healthy and cancerous esophagus uncovers bacterial biomarkers of clinical outcomes
ISME Communications, Volume 3, Issue 1, December 2023, 128, https://doi.org/10.1038/s43705-023-00338-1
Contrasting drivers of abundant phage and prokaryotic communities revealed in diverse coastal ecosystems
ISME Communications, Volume 3, Issue 1, December 2023, 127, https://doi.org/10.1038/s43705-023-00333-6
Enhanced specificity of Bacillus metataxonomics using a tuf-targeted amplicon sequencing approach
ISME Communications, Volume 3, Issue 1, December 2023, 126, https://doi.org/10.1038/s43705-023-00330-9
Diurnal cycles drive rhythmic physiology and promote survival in facultative phototrophic bacteria
ISME Communications, Volume 3, Issue 1, December 2023, 125, https://doi.org/10.1038/s43705-023-00334-5
Genomic evidence that microbial carbon degradation is dominated by iron redox metabolism in thawing permafrost
ISME Communications, Volume 3, Issue 1, December 2023, 124, https://doi.org/10.1038/s43705-023-00326-5
Associations of Batrachochytrium dendrobatidis with skin bacteria and fungi on Asian amphibian hosts
ISME Communications, Volume 3, Issue 1, December 2023, 123, https://doi.org/10.1038/s43705-023-00332-7
Gut microbiomes of cycad-feeding insects tolerant to β-methylamino-L-alanine (BMAA) are rich in siderophore biosynthesis
ISME Communications, Volume 3, Issue 1, December 2023, 122, https://doi.org/10.1038/s43705-023-00323-8
The mechanism effects of root exudate on microbial community of rhizosphere soil of tree, shrub, and grass in forest ecosystem under N deposition
ISME Communications, Volume 3, Issue 1, December 2023, 120, https://doi.org/10.1038/s43705-023-00322-9
Dynamic social interactions and keystone species shape the diversity and stability of mixed-species biofilms – an example from dairy isolates
ISME Communications, Volume 3, Issue 1, December 2023, 118, https://doi.org/10.1038/s43705-023-00328-3
Phylogenetically and metabolically diverse autotrophs in the world’s deepest blue hole
ISME Communications, Volume 3, Issue 1, December 2023, 117, https://doi.org/10.1038/s43705-023-00327-4
Analysis of microbial composition and sharing in low-biomass human milk samples: a comparison of DNA isolation and sequencing techniques
ISME Communications, Volume 3, Issue 1, December 2023, 116, https://doi.org/10.1038/s43705-023-00325-6
Prevalence and transmission risk of colistin and multidrug resistance in long-distance coastal aquaculture
ISME Communications, Volume 3, Issue 1, December 2023, 115, https://doi.org/10.1038/s43705-023-00321-w
Linking differences in microbial network structure with changes in coral larval settlement
ISME Communications, Volume 3, Issue 1, December 2023, 114, https://doi.org/10.1038/s43705-023-00320-x
Common loss of far-red light photoacclimation in cyanobacteria from hot and cold deserts: a case study in the Chroococcidiopsidales
ISME Communications, Volume 3, Issue 1, December 2023, 113, https://doi.org/10.1038/s43705-023-00319-4
Extracellular vesicles are the main contributor to the non-viral protected extracellular sequence space
ISME Communications, Volume 3, Issue 1, December 2023, 112, https://doi.org/10.1038/s43705-023-00317-6
Establishment of a transparent soil system to study Bacillus subtilis chemical ecology
ISME Communications, Volume 3, Issue 1, December 2023, 110, https://doi.org/10.1038/s43705-023-00318-5
Ubiquitous, B12-dependent virioplankton utilizing ribonucleotide-triphosphate reductase demonstrate interseasonal dynamics and associate with a diverse range of bacterial hosts in the pelagic ocean
ISME Communications, Volume 3, Issue 1, December 2023, 108, https://doi.org/10.1038/s43705-023-00306-9
Synechococcus nitrogen gene loss in iron-limited ocean regions
ISME Communications, Volume 3, Issue 1, December 2023, 107, https://doi.org/10.1038/s43705-023-00314-9
Selection and enrichment of microbial species with an increased lignocellulolytic phenotype from a native soil microbiome by activity-based probing
ISME Communications, Volume 3, Issue 1, December 2023, 106, https://doi.org/10.1038/s43705-023-00305-w
Arctic bacterial diversity and connectivity in the coastal margin of the Last Ice Area
ISME Communications, Volume 3, Issue 1, December 2023, 105, https://doi.org/10.1038/s43705-023-00313-w
The succession of epiphytic microalgae conditions fungal community composition: how chytrids respond to blooms of dinoflagellates
ISME Communications, Volume 3, Issue 1, December 2023, 103, https://doi.org/10.1038/s43705-023-00304-x
Tomato growth stage modulates bacterial communities across different soil aggregate sizes and disease levels
ISME Communications, Volume 3, Issue 1, December 2023, 104, https://doi.org/10.1038/s43705-023-00312-x
Species-specific responses of marine bacteria to environmental perturbation
ISME Communications, Volume 3, Issue 1, December 2023, 99, https://doi.org/10.1038/s43705-023-00310-z
Abundant Sulfitobacter marine bacteria protect Emiliania huxleyi algae from pathogenic bacteria
ISME Communications, Volume 3, Issue 1, December 2023, 100, https://doi.org/10.1038/s43705-023-00311-y
Predicting global distributions of eukaryotic plankton communities from satellite data
ISME Communications, Volume 3, Issue 1, December 2023, 101, https://doi.org/10.1038/s43705-023-00308-7
Ecogenomics and cultivation reveal distinctive viral-bacterial communities in the surface microlayer of a Baltic Sea slick
ISME Communications, Volume 3, Issue 1, December 2023, 97, https://doi.org/10.1038/s43705-023-00307-8
Slow growing bacteria survive bacteriophage in isolation
ISME Communications, Volume 3, Issue 1, December 2023, 95, https://doi.org/10.1038/s43705-023-00299-5
Top abundant deep ocean heterotrophic bacteria can be retrieved by cultivation
ISME Communications, Volume 3, Issue 1, December 2023, 92, https://doi.org/10.1038/s43705-023-00290-0
Phagotrophic protists preserve antibiotic-resistant opportunistic human pathogens in the vegetable phyllosphere
ISME Communications, Volume 3, Issue 1, December 2023, 94, https://doi.org/10.1038/s43705-023-00302-z
Top-down structuring of freshwater bacterial communities by mixotrophic flagellates
ISME Communications, Volume 3, Issue 1, December 2023, 93, https://doi.org/10.1038/s43705-023-00289-7
Competitive and substrate limited environments drive metabolic heterogeneity for comammox Nitrospira
ISME Communications, Volume 3, Issue 1, December 2023, 91, https://doi.org/10.1038/s43705-023-00288-8
Identifying and tracking mobile elements in evolving compost communities yields insights into the nanobiome
ISME Communications, Volume 3, Issue 1, December 2023, 90, https://doi.org/10.1038/s43705-023-00294-w
Nodulation number tempers the relative importance of stochastic processes in the assembly of soybean root-associated communities
ISME Communications, Volume 3, Issue 1, December 2023, 89, https://doi.org/10.1038/s43705-023-00296-8
MArVD2: a machine learning enhanced tool to discriminate between archaeal and bacterial viruses in viral datasets
ISME Communications, Volume 3, Issue 1, December 2023, 87, https://doi.org/10.1038/s43705-023-00295-9
Integrating microbial community properties, biomass and necromass to predict cropland soil organic carbon
ISME Communications, Volume 3, Issue 1, December 2023, 86, https://doi.org/10.1038/s43705-023-00300-1
Inter-comparison of marine microbiome sampling protocols
ISME Communications, Volume 3, Issue 1, December 2023, 84, https://doi.org/10.1038/s43705-023-00278-w
Comparative genomics unveils extensive genomic variation between populations of Listeria species in natural and food-associated environments
ISME Communications, Volume 3, Issue 1, December 2023, 85, https://doi.org/10.1038/s43705-023-00293-x
Discovery of a novel bacterial class with the capacity to drive sulfur cycling and microbiome structure in a paleo-ocean analog
ISME Communications, Volume 3, Issue 1, December 2023, 82, https://doi.org/10.1038/s43705-023-00287-9
A comparative study reveals the relative importance of prokaryotic and eukaryotic proton pump rhodopsins in a subtropical marginal sea
ISME Communications, Volume 3, Issue 1, December 2023, 79, https://doi.org/10.1038/s43705-023-00292-y
Geochemical constraints on bacteriophage infectivity in terrestrial environments
ISME Communications, Volume 3, Issue 1, December 2023, 78, https://doi.org/10.1038/s43705-023-00297-7
Contrasting response of soil microbiomes to long-term fertilization in various highland cropping systems
ISME Communications, Volume 3, Issue 1, December 2023, 81, https://doi.org/10.1038/s43705-023-00286-w
Ocean-wide comparisons of mesopelagic planktonic community structures
ISME Communications, Volume 3, Issue 1, December 2023, 83, https://doi.org/10.1038/s43705-023-00279-9
Bacterial and archaeal community distributions and cosmopolitanism across physicochemically diverse hot springs
ISME Communications, Volume 3, Issue 1, December 2023, 80, https://doi.org/10.1038/s43705-023-00291-z
Rapid and accurate taxonomic classification of cpn60 amplicon sequence variants
ISME Communications, Volume 3, Issue 1, December 2023, 77, https://doi.org/10.1038/s43705-023-00283-z
Longitudinal development of the airway metagenome of preterm very low birth weight infants during the first two years of life
ISME Communications, Volume 3, Issue 1, December 2023, 75, https://doi.org/10.1038/s43705-023-00285-x
Partitioning of the denitrification pathway and other nitrite metabolisms within global oxygen deficient zones
ISME Communications, Volume 3, Issue 1, December 2023, 76, https://doi.org/10.1038/s43705-023-00284-y
The predictive power of phylogeny on growth rates in soil bacterial communities
ISME Communications, Volume 3, Issue 1, December 2023, 73, https://doi.org/10.1038/s43705-023-00281-1
Mining-impacted rice paddies select for Archaeal methylators and reveal a putative (Archaeal) regulator of mercury methylation
ISME Communications, Volume 3, Issue 1, December 2023, 74, https://doi.org/10.1038/s43705-023-00277-x
Phylogeny and biogeography of the algal DMS-releasing enzyme in the global ocean
ISME Communications, Volume 3, Issue 1, December 2023, 72, https://doi.org/10.1038/s43705-023-00280-2
Potential relevance between soybean nitrogen uptake and rhizosphere prokaryotic communities under waterlogging stress
ISME Communications, Volume 3, Issue 1, December 2023, 71, https://doi.org/10.1038/s43705-023-00282-0
Polyethylene degradation and assimilation by the marine yeast Rhodotorula mucilaginosa
ISME Communications, Volume 3, Issue 1, December 2023, 68, https://doi.org/10.1038/s43705-023-00267-z
Genomic copy number variability at the genus, species and population levels impacts in situ ecological analyses of dinoflagellates and harmful algal blooms
ISME Communications, Volume 3, Issue 1, December 2023, 70, https://doi.org/10.1038/s43705-023-00274-0
Evaluating cpn60 for high-resolution profiling of the mammalian skin microbiome and detection of phylosymbiosis
ISME Communications, Volume 3, Issue 1, December 2023, 69, https://doi.org/10.1038/s43705-023-00276-y
Evaluating the role of bacterial diversity in supporting soil ecosystem functions under anthropogenic stress
ISME Communications, Volume 3, Issue 1, December 2023, 66, https://doi.org/10.1038/s43705-023-00273-1
Large-scale omics dataset of polymer degradation provides robust interpretation for microbial niche and succession on different plastisphere
ISME Communications, Volume 3, Issue 1, December 2023, 67, https://doi.org/10.1038/s43705-023-00275-z
Local eukaryotic and bacterial stream community assembly is shaped by regional land use effects
ISME Communications, Volume 3, Issue 1, December 2023, 65, https://doi.org/10.1038/s43705-023-00272-2
Expansion of Armatimonadota through marine sediment sequencing describes two classes with unique ecological roles
ISME Communications, Volume 3, Issue 1, December 2023, 64, https://doi.org/10.1038/s43705-023-00269-x
Interkingdom interaction: the soil isopod Porcellio scaber stimulates the methane-driven bacterial and fungal interaction
ISME Communications, Volume 3, Issue 1, December 2023, 62, https://doi.org/10.1038/s43705-023-00271-3
Symbiotic UCYN-A strains co-occurred with El Niño, relaxed upwelling, and varied eukaryotes over 10 years off Southern California
ISME Communications, Volume 3, Issue 1, December 2023, 63, https://doi.org/10.1038/s43705-023-00268-y
Construction of white-rot fungal-bacterial consortia with improved ligninolytic properties and stable bacterial community structure
ISME Communications, Volume 3, Issue 1, December 2023, 61, https://doi.org/10.1038/s43705-023-00270-4
Social transmission of bacterial symbionts homogenizes the microbiome within and across generations of group-living spiders
ISME Communications, Volume 3, Issue 1, December 2023, 60, https://doi.org/10.1038/s43705-023-00256-2
Future ocean conditions induce necrosis, microbial dysbiosis and nutrient cycling imbalance in the reef sponge Stylissa flabelliformis
ISME Communications, Volume 3, Issue 1, December 2023, 53, https://doi.org/10.1038/s43705-023-00247-3
Accounting for 16S rRNA copy number prediction uncertainty and its implications in bacterial diversity analyses
ISME Communications, Volume 3, Issue 1, December 2023, 59, https://doi.org/10.1038/s43705-023-00266-0
Geology and land use shape nitrogen and sulfur cycling groundwater microbial communities in Pacific Island aquifers
ISME Communications, Volume 3, Issue 1, December 2023, 58, https://doi.org/10.1038/s43705-023-00261-5
Fine scale sampling reveals early differentiation of rhizosphere microbiome from bulk soil in young Brachypodium plant roots
ISME Communications, Volume 3, Issue 1, December 2023, 54, https://doi.org/10.1038/s43705-023-00265-1
Frequent pulse disturbances shape resistance and resilience in tropical marine microbial communities
ISME Communications, Volume 3, Issue 1, December 2023, 55, https://doi.org/10.1038/s43705-023-00260-6
Reduced selection for antibiotic resistance in community context is maintained despite pressure by additional antibiotics
ISME Communications, Volume 3, Issue 1, December 2023, 52, https://doi.org/10.1038/s43705-023-00262-4
Distribution and diversity of ‘Tectomicrobia’, a deep-branching uncultivated bacterial lineage harboring rich producers of bioactive metabolites
ISME Communications, Volume 3, Issue 1, December 2023, 50, https://doi.org/10.1038/s43705-023-00259-z
The Pathfinder plasmid toolkit for genetically engineering newly isolated bacteria enables the study of Drosophila-colonizing Orbaceae
ISME Communications, Volume 3, Issue 1, December 2023, 49, https://doi.org/10.1038/s43705-023-00255-3
Metabolic handoffs between multiple symbionts may benefit the deep-sea bathymodioline mussels
ISME Communications, Volume 3, Issue 1, December 2023, 48, https://doi.org/10.1038/s43705-023-00254-4
Double emulsions as a high-throughput enrichment and isolation platform for slower-growing microbes
ISME Communications, Volume 3, Issue 1, December 2023, 47, https://doi.org/10.1038/s43705-023-00241-9
The association of prokaryotic antiviral systems and symbiotic phage communities in drinking water microbiomes
ISME Communications, Volume 3, Issue 1, December 2023, 46, https://doi.org/10.1038/s43705-023-00249-1
Dispersal changes soil bacterial interactions with fungal wood decomposition
ISME Communications, Volume 3, Issue 1, December 2023, 44, https://doi.org/10.1038/s43705-023-00253-5
Oxygen tolerance and detoxification mechanisms of highly enriched planktonic anaerobic ammonium-oxidizing (anammox) bacteria
ISME Communications, Volume 3, Issue 1, December 2023, 45, https://doi.org/10.1038/s43705-023-00251-7
Metagenome-based metabolic modelling predicts unique microbial interactions in deep-sea hydrothermal plume microbiomes
ISME Communications, Volume 3, Issue 1, December 2023, 42, https://doi.org/10.1038/s43705-023-00242-8
Assessing the biogeography of marine giant viruses in four oceanic transects
ISME Communications, Volume 3, Issue 1, December 2023, 43, https://doi.org/10.1038/s43705-023-00252-6
pWCP is a widely distributed and highly conserved Wolbachia plasmid in Culex pipiens and Culex quinquefasciatus mosquitoes worldwide
ISME Communications, Volume 3, Issue 1, December 2023, 40, https://doi.org/10.1038/s43705-023-00248-2
Metabolic cooperation between conspecific genotypic groups contributes to bacterial fitness
ISME Communications, Volume 3, Issue 1, December 2023, 41, https://doi.org/10.1038/s43705-023-00250-8
Optimizing ex vivo culture conditions to study human gut microbiome
ISME Communications, Volume 3, Issue 1, December 2023, 38, https://doi.org/10.1038/s43705-023-00245-5
Phylogenetic and metabolic diversity of microbial communities performing anaerobic ammonium and methane oxidations under different nitrogen loadings
ISME Communications, Volume 3, Issue 1, December 2023, 39, https://doi.org/10.1038/s43705-023-00246-4
Functional annotation and importance of marine bacterial transporters of plankton exometabolites
ISME Communications, Volume 3, Issue 1, December 2023, 37, https://doi.org/10.1038/s43705-023-00244-6
Mediterranean Sea heatwaves jeopardize greater amberjack’s (Seriola dumerili) aquaculture productivity through impacts on the fish microbiota
ISME Communications, Volume 3, Issue 1, December 2023, 36, https://doi.org/10.1038/s43705-023-00243-7
Swine farm groundwater is a hidden hotspot for antibiotic-resistant pathogenic Acinetobacter
ISME Communications, Volume 3, Issue 1, December 2023, 34, https://doi.org/10.1038/s43705-023-00240-w
SituSeq: an offline protocol for rapid and remote Nanopore 16S rRNA amplicon sequence analysis
ISME Communications, Volume 3, Issue 1, December 2023, 33, https://doi.org/10.1038/s43705-023-00239-3
The effect of wheat genotype on the microbiome is more evident in roots and varies through time
ISME Communications, Volume 3, Issue 1, December 2023, 32, https://doi.org/10.1038/s43705-023-00238-4
Rapid differentiation of soil and root microbiomes in response to plant composition and biodiversity in the field
ISME Communications, Volume 3, Issue 1, December 2023, 31, https://doi.org/10.1038/s43705-023-00237-5
Metatranscriptomic response of the wheat holobiont to decreasing soil water content
ISME Communications, Volume 3, Issue 1, December 2023, 30, https://doi.org/10.1038/s43705-023-00235-7
Lipid stores reveal the state of the coral-algae symbiosis at the single-cell level
ISME Communications, Volume 3, Issue 1, December 2023, 29, https://doi.org/10.1038/s43705-023-00234-8
Viruses of a key coral symbiont exhibit temperature-driven productivity across a reefscape
ISME Communications, Volume 3, Issue 1, December 2023, 27, https://doi.org/10.1038/s43705-023-00227-7
An agroecological structure model of compost—soil—plant interactions for sustainable organic farming
ISME Communications, Volume 3, Issue 1, December 2023, 28, https://doi.org/10.1038/s43705-023-00233-9
Nitrite accumulation and anammox bacterial niche partitioning in Arctic Mid-Ocean Ridge sediments
ISME Communications, Volume 3, Issue 1, December 2023, 26, https://doi.org/10.1038/s43705-023-00230-y
Linking prokaryotic genome size variation to metabolic potential and environment
ISME Communications, Volume 3, Issue 1, December 2023, 25, https://doi.org/10.1038/s43705-023-00231-x
Xanthomonas infection and ozone stress distinctly influence the microbial community structure and interactions in the pepper phyllosphere
ISME Communications, Volume 3, Issue 1, December 2023, 24, https://doi.org/10.1038/s43705-023-00232-w
Suspension of oral hygiene practices highlights key bacterial shifts in saliva, tongue, and tooth plaque during gingival inflammation and resolution
ISME Communications, Volume 3, Issue 1, December 2023, 23, https://doi.org/10.1038/s43705-023-00229-5
Diversity and function of methyl-coenzyme M reductase-encoding archaea in Yellowstone hot springs revealed by metagenomics and mesocosm experiments
ISME Communications, Volume 3, Issue 1, December 2023, 22, https://doi.org/10.1038/s43705-023-00225-9
Community dynamics of microbial eukaryotes in intertidal mudflats in the hypertidal Bay of Fundy
ISME Communications, Volume 3, Issue 1, December 2023, 21, https://doi.org/10.1038/s43705-023-00226-8
Characterization of a bloom-associated alphaproteobacterial lineage, ‘Candidatus Phycosocius’: insights into freshwater algal-bacterial interactions
ISME Communications, Volume 3, Issue 1, December 2023, 20, https://doi.org/10.1038/s43705-023-00228-6
A meta-analysis of the stony coral tissue loss disease microbiome finds key bacteria in unaffected and lesion tissue in diseased colonies
ISME Communications, Volume 3, Issue 1, December 2023, 19, https://doi.org/10.1038/s43705-023-00220-0
The terrestrial isopod symbiont ‘Candidatus Hepatincola porcellionum’ is a potential nutrient scavenger related to Holosporales symbionts of protists
ISME Communications, Volume 3, Issue 1, December 2023, 18, https://doi.org/10.1038/s43705-023-00224-w
Simultaneous sulfate and nitrate reduction in coastal sediments
ISME Communications, Volume 3, Issue 1, December 2023, 17, https://doi.org/10.1038/s43705-023-00222-y
Beyond the limits of the unassigned protist microbiome: inferring large-scale spatio-temporal patterns of Syndiniales marine parasites
ISME Communications, Volume 3, Issue 1, December 2023, 16, https://doi.org/10.1038/s43705-022-00203-7
Importance of mobile genetic element immunity in numerically abundant Trichodesmium clades
ISME Communications, Volume 3, Issue 1, December 2023, 15, https://doi.org/10.1038/s43705-023-00214-y
Metagenomic and machine learning-aided identification of biomarkers driving distinctive Cd accumulation features in the root-associated microbiome of two rice cultivars
ISME Communications, Volume 3, Issue 1, December 2023, 14, https://doi.org/10.1038/s43705-023-00213-z
Ultra-small bacteria and archaea exhibit genetic flexibility towards groundwater oxygen content, and adaptations for attached or planktonic lifestyles
ISME Communications, Volume 3, Issue 1, December 2023, 13, https://doi.org/10.1038/s43705-023-00223-x
Selfish bacteria are active throughout the water column of the ocean
ISME Communications, Volume 3, Issue 1, December 2023, 11, https://doi.org/10.1038/s43705-023-00219-7
Genomics discovery of giant fungal viruses from subsurface oceanic crustal fluids
ISME Communications, Volume 3, Issue 1, December 2023, 10, https://doi.org/10.1038/s43705-022-00210-8
Biogeochemical and historical drivers of microbial community composition and structure in sediments from Mercer Subglacial Lake, West Antarctica
ISME Communications, Volume 3, Issue 1, December 2023, 8, https://doi.org/10.1038/s43705-023-00216-w
A candidate transporter allowing symbiotic dinoflagellates to feed their coral hosts
ISME Communications, Volume 3, Issue 1, December 2023, 7, https://doi.org/10.1038/s43705-023-00218-8
Response of cyanobacterial mats to ambient phosphate fluctuations: phosphorus cycling, polyphosphate accumulation and stoichiometric flexibility
ISME Communications, Volume 3, Issue 1, December 2023, 6, https://doi.org/10.1038/s43705-023-00215-x
Bacterial transcriptional response to labile exometabolites from photosynthetic picoeukaryote Micromonas commoda
ISME Communications, Volume 3, Issue 1, December 2023, 5, https://doi.org/10.1038/s43705-023-00212-0
Impact of meltwater flow intensity on the spatiotemporal heterogeneity of microbial mats in the McMurdo Dry Valleys, Antarctica
ISME Communications, Volume 3, Issue 1, December 2023, 3, https://doi.org/10.1038/s43705-022-00202-8
Combined metagenomic and metabolomic analyses reveal that Bt rice planting alters soil C-N metabolism
ISME Communications, Volume 3, Issue 1, December 2023, 4, https://doi.org/10.1038/s43705-023-00217-9
DNA uptake from a laboratory environment drives unexpected adaptation of a thermophile to a minor medium component
ISME Communications, Volume 3, Issue 1, December 2023, 2, https://doi.org/10.1038/s43705-022-00211-7
Ecological insights into soil health according to the genomic traits and environment-wide associations of bacteria in agricultural soils
ISME Communications, Volume 3, Issue 1, December 2023, 1, https://doi.org/10.1038/s43705-022-00209-1
Brief Communication
Nitrogen and sulfur metabolisms encoded in prokaryotic communities associated with sea ice algae
ISME Communications, Volume 3, Issue 1, December 2023, 131, https://doi.org/10.1038/s43705-023-00337-2
Exploring the competitive dynamic enzyme allocation scheme through enzyme cost minimization
ISME Communications, Volume 3, Issue 1, December 2023, 121, https://doi.org/10.1038/s43705-023-00331-8
Net-spinning caddisflies create denitrifier-enriched niches in the stream microbiome
ISME Communications, Volume 3, Issue 1, December 2023, 111, https://doi.org/10.1038/s43705-023-00315-8
Widespread occurrence of chitinase-encoding genes suggests the Endozoicomonadaceae family as a key player in chitin processing in the marine benthos
ISME Communications, Volume 3, Issue 1, December 2023, 109, https://doi.org/10.1038/s43705-023-00316-7
Linking bacterial tetrabromopyrrole biosynthesis to coral metamorphosis
ISME Communications, Volume 3, Issue 1, December 2023, 98, https://doi.org/10.1038/s43705-023-00309-6
Vitamin B12 conveys a protective advantage to phycosphere-associated bacteria at high temperatures
ISME Communications, Volume 3, Issue 1, December 2023, 88, https://doi.org/10.1038/s43705-023-00298-6
Intra-population genomic diversity of the bloom-forming cyanobacterium, Aphanizomenon gracile, at low spatial scale
ISME Communications, Volume 3, Issue 1, December 2023, 57, https://doi.org/10.1038/s43705-023-00263-3
Challenges in supplying empirical proof for predictions derived from Species Distribution Models (SDMs): the case of an invasive cyanobacterium
ISME Communications, Volume 3, Issue 1, December 2023, 56, https://doi.org/10.1038/s43705-023-00264-2
Impact of microbial genome completeness on metagenomic functional inference
ISME Communications, Volume 3, Issue 1, December 2023, 12, https://doi.org/10.1038/s43705-023-00221-z
Correction
Correction to: The Pathfinder plasmid toolkit for genetically engineering newly isolated bacteria enables the study of Drosophila-colonizing Orbaceae
ISME Communications, Volume 3, Issue 1, December 2023, 119, https://doi.org/10.1038/s43705-023-00329-2
Correction: Vulcanimicrobium alpinus gen. nov. sp. nov., the first cultivated representative of the candidate phylum “Eremiobacterota”, is a metabolically versatile aerobic anoxygenic phototroph
ISME Communications, Volume 3, Issue 1, December 2023, 102, https://doi.org/10.1038/s43705-023-00301-0
Correction: Suspension of oral hygiene practices highlights key bacterial shifts in saliva, tongue, and tooth plaque during gingival inflammation and resolution
ISME Communications, Volume 3, Issue 1, December 2023, 51, https://doi.org/10.1038/s43705-023-00258-0
Correction: Ecological insights into soil health according to the genomic traits and environment-wide associations of bacteria in agricultural soils
ISME Communications, Volume 3, Issue 1, December 2023, 35, https://doi.org/10.1038/s43705-023-00236-6
Perspective
Request for public discussion and ballot to amend SeqCode rules on priority of Candidatus names and correction of typographic and orthographic errors
ISME Communications, Volume 3, Issue 1, December 2023, 96, https://doi.org/10.1038/s43705-023-00303-y
Review Article
Using click chemistry to study microbial ecology and evolution
ISME Communications, Volume 3, Issue 1, December 2023, 9, https://doi.org/10.1038/s43705-022-00205-5
