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Volume 9, Issue 2, February 2020
Genomic diversity affects the accuracy of bacterial single-nucleotide polymorphism–calling pipelines
Stephen J Bush and others
GigaScience, Volume 9, Issue 2, February 2020, giaa007, https://doi.org/10.1093/gigascience/giaa007
Technical Note
Refgenie: a reference genome resource manager
Michał Stolarczyk and others
GigaScience, Volume 9, Issue 2, February 2020, giz149, https://doi.org/10.1093/gigascience/giz149
Research
Evaluating the genome and resistome of extensively drug-resistant Klebsiella pneumoniae using native DNA and RNA Nanopore sequencing
Miranda E Pitt and others
GigaScience, Volume 9, Issue 2, February 2020, giaa002, https://doi.org/10.1093/gigascience/giaa002
Technical Note
The Data Tags Suite (DATS) model for discovering data access and use requirements
George Alter and others
GigaScience, Volume 9, Issue 2, February 2020, giz165, https://doi.org/10.1093/gigascience/giz165
Research
HAMAP as SPARQL rules—A portable annotation pipeline for genomes and proteomes
Jerven Bolleman and others
GigaScience, Volume 9, Issue 2, February 2020, giaa003, https://doi.org/10.1093/gigascience/giaa003
Data Note
Inferring putative ancient whole-genome duplications in the 1000 Plants (1KP) initiative: access to gene family phylogenies and age distributions
Zheng Li and Michael S Barker
GigaScience, Volume 9, Issue 2, February 2020, giaa004, https://doi.org/10.1093/gigascience/giaa004
Research
De novo genome assembly and Hi-C analysis reveal an association between chromatin architecture alterations and sex differentiation in the woody plant Jatropha curcas
Mao-Sheng Chen and others
GigaScience, Volume 9, Issue 2, February 2020, giaa009, https://doi.org/10.1093/gigascience/giaa009
Research
GC bias affects genomic and metagenomic reconstructions, underrepresenting GC-poor organisms
Patrick Denis Browne and others
GigaScience, Volume 9, Issue 2, February 2020, giaa008, https://doi.org/10.1093/gigascience/giaa008
Research
Genomic analyses reveal distinct genetic architectures and selective pressures in buffaloes
Ting Sun and others
GigaScience, Volume 9, Issue 2, February 2020, giz166, https://doi.org/10.1093/gigascience/giz166
Data Note
Chromosomal-level assembly of Juglans sigillata genome using Nanopore, BioNano, and Hi-C analysis
De-Lu Ning and others
GigaScience, Volume 9, Issue 2, February 2020, giaa006, https://doi.org/10.1093/gigascience/giaa006
Research
Artificial intelligence deciphers codes for color and odor perceptions based on large-scale chemoinformatic data
Xiayin Zhang and others
GigaScience, Volume 9, Issue 2, February 2020, giaa011, https://doi.org/10.1093/gigascience/giaa011
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