
Volume 13, Issue 6
June 2021
Cover image
Cover image

Cover caption: Genome differences between the germline and somatic cells of an individual can arise by a plethora of mechanisms across taxa. This Special Section includes original articles and reviews on polyploidy in bacteria, programmed DNA elimination in songbirds, uniparental genome elimination in fishes, germline-restricted chromosomes in insects, and mitochondrial heteroplasmy in molluscs. Shown from left to right are the Epulopiscium bacteria (inside a large ciliate to the left), Taeniopygia guttata zebra finches, Hypseleotris fishes, Bradysia coprophila fungus gnats, and Ruditapes philippinarum clams.
Photo credits: Esther Angert, Wolfgang Forstmeier, Peter Unmack, Christina Hodson and Liliana Milani. Collage by Zuzana Majtanova and Alexander Suh.
EISSN 1759-6653
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Volume 13, Issue 6, June 2021
Special section: Within-individual genome variation and germline/soma distinction
Highlights
Highlight: Reconciling Differences between Germline and Soma
Casey McGrath
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab102, https://doi.org/10.1093/gbe/evab102
Reviews
Challenges Faced by Highly Polyploid Bacteria with Limits on DNA Inheritance
Esther R Angert
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab037, https://doi.org/10.1093/gbe/evab037
Evolutionary Perspectives on Germline-Restricted Chromosomes in Flies (Diptera)
Christina N Hodson and Laura Ross
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab072, https://doi.org/10.1093/gbe/evab072
Perspectives
New Perspectives on the Evolution of Within-Individual Genome Variation and Germline/Soma Distinction
Alexander Suh and Anne-Marie Dion-Côté
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab095, https://doi.org/10.1093/gbe/evab095
Letters
A Transcriptomic Pipeline Adapted for Genomic Sequence Discovery of Germline-Restricted Sequence in Zebra Finch, Taeniopygia guttata
Kathryn C Asalone and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab088, https://doi.org/10.1093/gbe/evab088
Research Articles
Uniparental Genome Elimination in Australian Carp Gudgeons
Zuzana Majtánová and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab030, https://doi.org/10.1093/gbe/evab030
Editor's Note
Editor’s Note: A Naturally Heteroplasmic Clam Provides Clues about the Effects of Genetic Bottleneck on Paternal mtDNA
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab139, https://doi.org/10.1093/gbe/evab139
Letters
Chromosomal Inversion Polymorphisms in Two Sympatric Ascidian Lineages
Yutaka Satou and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab068, https://doi.org/10.1093/gbe/evab068
Selection Maintains Protein Interactome Resilience in the Long-Term Evolution Experiment with Escherichia coli
Rohan Maddamsetti
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab074, https://doi.org/10.1093/gbe/evab074
The Asgard Archaeal-Unique Contribution to Protein Families of the Eukaryotic Common Ancestor Was 0.3%
Michael Knopp and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab085, https://doi.org/10.1093/gbe/evab085
HuConTest: Testing Human Contamination in Great Ape Samples
Martin Kuhlwilm and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab117, https://doi.org/10.1093/gbe/evab117
Research Articles
Gene Coexpression Network Reveals Highly Conserved, Well-Regulated Anti-Ageing Mechanisms in Old Ant Queens
Mark C Harrison and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab093, https://doi.org/10.1093/gbe/evab093
Genomic Analyses Unveil Helmeted Guinea Fowl (Numida meleagris) Domestication in West Africa
Quan-Kuan Shen and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab090, https://doi.org/10.1093/gbe/evab090
Genetic Context Significantly Influences the Maintenance and Evolution of Degenerate Pathways
Eric L Bruger and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab082, https://doi.org/10.1093/gbe/evab082
Chromosome-Level Assembly of the Atlantic Silverside Genome Reveals Extreme Levels of Sequence Diversity and Structural Genetic Variation
Anna Tigano and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab098, https://doi.org/10.1093/gbe/evab098
Transcriptomic Signatures of Ageing Vary in Solitary and Social Forms of an Orchid Bee
Alice Séguret and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab075, https://doi.org/10.1093/gbe/evab075
Homoeolog Inference Methods Requiring Bidirectional Best Hits or Synteny Miss Many Pairs
Natasha Glover and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab077, https://doi.org/10.1093/gbe/evab077
Phylogenetic and Selection Analysis of an Expanded Family of Putatively Pore-Forming Jellyfish Toxins (Cnidaria: Medusozoa)
Anna M L Klompen and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab081, https://doi.org/10.1093/gbe/evab081
Lipocalins in Arthropod Chemical Communication
Jiao Zhu and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab091, https://doi.org/10.1093/gbe/evab091
Developmental Transcriptomics Reveals a Gene Network Driving Mimetic Color Variation in a Bumble Bee
Sarthok Rasique Rahman and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab080, https://doi.org/10.1093/gbe/evab080
Universal Constraints on Protein Evolution in the Long-Term Evolution Experiment with Escherichia coli
Rohan Maddamsetti
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab070, https://doi.org/10.1093/gbe/evab070
Genome Report
A Chromosome—Level Genome Assembly of the Spotted Scat (Scatophagus argus)
Yuanqing Huang and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab092, https://doi.org/10.1093/gbe/evab092
Chromosomal-Level Reference Genome of the Neotropical Tree Jacaranda mimosifolia D. Don
Mingcheng Wang and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab094, https://doi.org/10.1093/gbe/evab094
Corrigendum
Corrigendum to: Resolving the Early Divergence Pattern of Teleost Fish Using Genome-Scale Data
Naoko Takezaki
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab118, https://doi.org/10.1093/gbe/evab118
Erratum
Erratum to: Predicted Input of Uncultured Fungal Symbionts to a Lichen Symbiosis from Metagenome-Assembled Genomes
Gulnara Tagirdzhanova and others
Genome Biology and Evolution, Volume 13, Issue 6, June 2021, evab129, https://doi.org/10.1093/gbe/evab129
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