Volume 100, Issue 3, March 2024
Minireview
Resilience of aerobic methanotrophs in soils; spotlight on the methane sink under agriculture
Synthesis and conceptualization of the response of aerobic methanotrophs to sporadic (one-off), recurring, and compounded disturbances, and their role as a methane sink in soils under agriculture management.
Perspective
Shared governance in the plant holobiont and implications for one health
Plant holobiont research catalyzes new approaches for human and environmental health on a rapidly changing world.
A metagenomic alpha-diversity index for microbial functional biodiversity
A proposed metagenomic diversity index provides simple and easily intrepretable information to link microbial functional potential and ecosystem processes.
Research Article
Unveiling the microbiome of hydroponically cultivated lettuce: impact of Phytophthora cryptogea infection on plant-associated microorganisms
Impact of Phytophthora cryptogea on the rhizosphere and root endosphere microbiome of hydroponically cultivated lettuce.
Seasonal dynamics of the microbial methane filter in the water column of a eutrophic coastal basin
Methane-oxidizing bacteria in coastal waters can mitigate diffusive methane emissions. Their metabolic versatility and resilience are potentially high. Yet, methane removal is insufficient and highly variable throughout the year.
The reproductive microbiome and maternal transmission of microbiota via eggs in Sceloporus virgatus
Striped plateau lizard females vertically transmit microbes from their reproductive microbiome—specifically oviductal and cloacal microbes—to their offspring, via eggshell and egg contents.
Bacterial community distribution and functional potentials provide key insights into their role in the ecosystem functioning of a retreating Eastern Himalayan glacier
Current findings elucidate the microbiome and associated functional potentials of a vulnerable glacier, emphasizing their significant ecological roles in a changing glacial ecosystem.
Microbial assemblages in Arctic coastal thermokarst lakes and lagoons
Transition from thermokarst lake to lagoon changed microbial assemblages more substantially than permafrost thaw and lake formation history.
Temporal and spatial variability of constitutive mixotroph abundance and proportion
A novel method using labeled prey tracers in a temperate estuary showed that actively grazing mixotrophic plankton are more abundant in spring and autumn and their presence may depend on environmental conditions favorable to different mixotrophs utilization of phagotrophy.
Microbial community and network responses across strong environmental gradients: How do they compare with macroorganisms?
Comparing microbial community and network responses with strong environmental gradients among coexisting macroorganisms in the intertidal rocky shore.
Habitat-specific patterns of bacterial communities in a glacier-fed lake on the Tibetan Plateau
This study demonstrated that among two major inlets a glacier-fed stream was more important than a non-glacier-fed stream for seeding the bacterial community of the lake.
Influence of host phylogeny and water physicochemistry on microbial assemblages of the fish skin microbiome
Meta-analysis reveals interrelationships between fish species, water physicochemistry, rearing conditions and microbiota in the skin of salt and freshwater fish. Created with BioRender.com.
A quantitative survey of the blueberry (Vaccinium spp.) culturable nectar microbiome: variation between cultivars, locations, and farm management approaches
Parallel analysis of blueberry crops and a wild relative offers insight into the impacts of management and domestication on the nectar microbiome.
Impacts of humic substances, elevated temperature, and UVB radiation on bacterial communities of the marine sponge Chondrilla sp
Humic substances modified bacterial composition within Chondrilla sp. sponges and enriched bacteria potentially involved in recalcitrant organic matter degradation while temperature and exposure to UVB had only minor and negligible effects, respectively.
From individual leaves to forest stands: importance of niche, distance decay, and stochasticity vary by ecosystem type and functional group for fungal community composition
The fungal communities found on individual leaves were analyzed to determine the importance of environmental and stochastic factors in community assembly.
Temporal dynamics of microbial transcription in wetted hyperarid desert soils
Structured and rapid microbiome response to watering in a Namib Desert soil using metatranscriptomics.
Long-term detection of Hartmannibacter diazotrophicus on winter wheat and spring barley roots under field conditions revealed positive correlations on yield parameters with the bacterium abundance
Hartmannibacter diazotrophicus used for seed inoculation of winter wheat and spring barely was able to colonize crop roots and affect yield parameters in a field experiment.