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Journal Article
Replicate geographic transects across a hybrid zone reveal parallelism and differences in the genetic architecture of reproductive isolation
Georgy Semenov and others
Evolution Letters, qraf009, https://doi.org/10.1093/evlett/qraf009
Published: 07 May 2025
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Geographic context of the study: Geographic distribution, sampling, and pop...
Published: 07 May 2025
Figure 1.
Geographic context of the study: Geographic distribution, sampling, and population structure as inferred by Principal Component Analysis in allopatric black-capped chickadees ( n = 15, blue circles), Carolina chickadees ( n = 11, red rectangles), and transects through their hybrid zones in Missour
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Genomic variation and patterns of introgression across two geographically d...
Published: 07 May 2025
Figure 2.
Genomic variation and patterns of introgression across two geographically distant transects in Missouri and Pennsylvania: (A) Hybrid index along the Missouri transect. (B) Hybrid index along the Pennsylvania transect. For both plots, the x -axis shows the cumulative number of individuals and the fr
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Significantly overrepresented biological pathways (IPA core database) for t...
Published: 07 May 2025
Figure 3.
Significantly overrepresented biological pathways (IPA core database) for the subset of unique genes ( n = 322) with restricted introgression in both Pennsylvania and Missouri transects. ALT TEXT: Results of Ingenuity Pathway Analysis exploring organization of genes associated with restricted ge
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Differentiation on the Z chromosome and detection of the putative inversion...
Published: 07 May 2025
Figure 4.
Differentiation on the Z chromosome and detection of the putative inversion. (A) Sampling locations of allopatric populations of western and eastern black-capped (blue) and Carolina (red) chickadees. WT and ET stand for western (Missouri) and eastern (Pennsylvania) transects. (B) and (C) PCA from th
Journal Article
Correction to: Positive correlations in susceptibility to a diverse panel of viruses across Drosophilidae host species
Evolution Letters, qraf010, https://doi.org/10.1093/evlett/qraf010
Published: 11 April 2025
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Phenotypic patterns and representative images for D. melanogaster ...
Published: 08 April 2025
Figure 2.
Phenotypic patterns and representative images for D. melanogaster populations in each natural context. (A) D. melanogaster pigmentation increases significantly with latitude. (B) A population of flies sampled from Media, PA, exhibit predictable and significant decreases in melanization from June
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Distributions of candidate pigmentation SNPs vs. bootstrap resamples of mat...
Published: 08 April 2025
Figure 3.
Distributions of candidate pigmentation SNPs vs. bootstrap resamples of matched control SNPs over space and time. Candidate pigmentation SNPs are not enriched as a group relative to matched controls across (A) latitudinal, (B) seasonal, or (C) experimental populations. Candidate SNPs were selected b
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Genes harboring SNPs with significant allele frequency shifts over latitude...
Published: 08 April 2025
Figure 4.
Genes harboring SNPs with significant allele frequency shifts over latitude, seasons in wild populations, and seasons in experimental populations. (A) Diagram of pigmentation genes containing significant SNPs from populations in each natural context. Significance of candidate pigmentation SNPs was d
Journal Article
Drosophila melanogaster pigmentation demonstrates adaptive phenotypic parallelism over multiple spatiotemporal scales
Skyler Berardi and others
Evolution Letters, qraf008, https://doi.org/10.1093/evlett/qraf008
Published: 08 April 2025
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Experimental overview. (A) We sampled flies from six wild orchard populatio...
Published: 08 April 2025
Figure 1.
Experimental overview. (A) We sampled flies from six wild orchard populations ranging from Homestead, FL, to Lancaster, MA, and established isofemale lines in the laboratory. (B) We returned to a focal orchard in Media, PA, at early- and late-season timepoints and collected flies to capture evolutio
Journal Article
Landscape structure as a driver of eco-evolution in host–parasite systems
Jhelam N Deshpande and others
Evolution Letters, qraf003, https://doi.org/10.1093/evlett/qraf003
Published: 01 April 2025
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Degree distribution (A), parasite relatedness (B), infected densities (C), ...
Published: 01 April 2025
Fig 2
Degree distribution (A), parasite relatedness (B), infected densities (C), and local parasite extinctions (D) as a function of dispersal for low (degree-1) and high (degree-5) connectivity patches for river-like and terrestrial-like landscapes. (A) Degree distribution of terrestrial-like vs. river-l
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Terrestrial-like (A) and river-like landscapes (B) lead to differences in v...
Published: 01 April 2025
Fig 1
Terrestrial-like (A) and river-like landscapes (B) lead to differences in virulence evolution (C) which vanish when parasite kin structure is broken (D). Thus, differences in virulence evolution between the two landscape types is explained by diverging patterns of landscape defined parasite relatedn
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Spatial distribution of evolved parasite virulence (A–C) and local parasite...
Published: 01 April 2025
Fig 3
Spatial distribution of evolved parasite virulence (A–C) and local parasite extinction (D–F) as a function of patch degree for terrestrial-like (brown) and river-like (blue) landscapes for different host dispersal probabilities ( d = 0 . 1 , 0 . 5 , 1 ) in ecological (virulence v =
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An eco-evolutionary feedback between host–parasite demography, landscape st...
Published: 01 April 2025
Fig 4
An eco-evolutionary feedback between host–parasite demography, landscape structure and virulence evolution. Clearly, landscape structure (green box) represents the abiotic environment, the biotic host–parasite interactions are shown by stacked boxes of hosts (gray) and parasites (red), ecological in
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Differences in tarsus length between city and forest birds: ( a ) When comp...
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Size in the city: morphological differences between city and forest great tits have a genetic basis
Published: 06 March 2025
Figure 1.
Differences in tarsus length between city and forest birds: ( a ) When comparing wild caught city (Utrecht) and forest (Heikamp) birds. ( b ) When comparing birds in common garden (F1 and F2 generations). Symbols: marginal means from the models containing the additive effects of ( a ) site, sex, and
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Differences in tarsus length of F3 birds. Symbols: marginal means from the ...
in
Size in the city: morphological differences between city and forest great tits have a genetic basis
Published: 06 March 2025
Figure 2.
Differences in tarsus length of F3 birds. Symbols: marginal means from the models containing the additive effects of treatment, origin, sex, generation, centered hatching date^2, centered hatching date, and the interaction between hatching date and origin. Bars: standard errors. Alt text. Plots c
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( A) Phylogenetic relationships among representative species (and families...
Published: 06 March 2025
Figure 1.
( A) Phylogenetic relationships among representative species (and families) of the big four holometabolan orders reconstructed from gene trees of orthogroups: H—Hymenoptera, C—Coleoptera, L—Lepidoptera, D—Diptera. The maximum likelihood tree for a concatenated alignment reconstructed by IQ-TREE2 wi
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The distribution of parameter estimates and other metrics across the separa...
Published: 06 March 2025
Figure 2.
The distribution of parameter estimates and other metrics across the separate analyses of 4,851 orthogroups. Values estimated under model 4 (positive selection branch-site model) are shown. ( A) The dN/dS ratio of codons under purifying selection. ( B) The estimated d N /d S ratio of codons shift
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