Volume 19, Issue 16, November 2003
ORIGINAL PAPERS
Codon adaptation index as a measure of dominating codon bias
A. Carbone and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2005–2015, https://doi.org/10.1093/bioinformatics/btg272
Applying signal theory to the analysis of biomolecules
Gerhard Kauer and Helmut Blöcker
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2016–2021, https://doi.org/10.1093/bioinformatics/btg273
Development of an integrated laboratory information management system for the maize mapping project
H. Sanchez-Villeda and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2022–2030, https://doi.org/10.1093/bioinformatics/btg274
A novel strategy for microarray quality control using Bayesian networks
Sampsa Hautaniemi and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2031–2038, https://doi.org/10.1093/bioinformatics/btg275
Inferring protein interactions from phylogenetic distance matrices
Jason Gertz and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2039–2045, https://doi.org/10.1093/bioinformatics/btg278
Extraction of protein interaction information from unstructured text using a context-free grammar
Joshua M. Temkin and Mark R. Gilder
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2046–2053, https://doi.org/10.1093/bioinformatics/btg279
Protein structural class identification directly from NMR spectra using averaged chemical shifts
S.P. Mielke and V.V. Krishnan
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2054–2064, https://doi.org/10.1093/bioinformatics/btg280
Venn Mapping: clustering of heterologous microarray data based on the number of co-occurring differentially expressed genes
Marcel Smid and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2065–2071, https://doi.org/10.1093/bioinformatics/btg282
Linear regression and two-class classification with gene expression data
Xiaohong Huang and Wei Pan
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2072–2078, https://doi.org/10.1093/bioinformatics/btg283
Markovian negentropies in bioinformatics. 1. A picture of footprints after the interaction of the HIV-1 Ψ-RNA packaging region with drugs
Humberto González Díaz and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2079–2087, https://doi.org/10.1093/bioinformatics/btg285
A Bayesian missing value estimation method for gene expression profile data
Shigeyuki Oba and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2088–2096, https://doi.org/10.1093/bioinformatics/btg287
Kernel hierarchical gene clustering from microarray expression data
Jie Qin and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2097–2104, https://doi.org/10.1093/bioinformatics/btg288
iMap: a database-driven utility to integrate and access the genetic and physical maps of maize
Z. Fang and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2105–2111, https://doi.org/10.1093/bioinformatics/btg289
Inhomogeneous molecular density: reference packing densities and distribution of cavities within proteins
Kristian Rother and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2112–2121, https://doi.org/10.1093/bioinformatics/btg292
A new sequence distance measure for phylogenetic tree construction
Hasan H. Otu and Khalid Sayood
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2122–2130, https://doi.org/10.1093/bioinformatics/btg295
An unsupervised hierarchical dynamic self-organizing approach to cancer class discovery and marker gene identification in microarray data
Arthur L. Hsu and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2131–2140, https://doi.org/10.1093/bioinformatics/btg296
APPLICATIONS NOTES
SNP cherry picker: maximizing the chance of finding an association with a disease SNP
Mark Harris and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2141–2143, https://doi.org/10.1093/bioinformatics/btg258
MetaFluxNet: the management of metabolic reaction information and quantitative metabolic flux analysis
Dong-Yup Lee and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2144–2146, https://doi.org/10.1093/bioinformatics/btg271
LDA—a java-based linkage disequilibrium analyzer
Keyue Ding and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2147–2148, https://doi.org/10.1093/bioinformatics/btg276
The UAB Proteomics Database
Aubrey Hill and Helen Kim
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2149–2151, https://doi.org/10.1093/bioinformatics/btg281
RED-T: utilizing the Ratios of Evolutionary Distances for determination of alternative phylogenetic events
Kamyar Farahi and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2152–2154, https://doi.org/10.1093/bioinformatics/btg284
Pathway studio—the analysis and navigation of molecular networks
Alexander Nikitin and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2155–2157, https://doi.org/10.1093/bioinformatics/btg290
GARBAN: genomic analysis and rapid biological annotation of cDNA microarray and proteomic data
Luis A. Martínez-Cruz and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2158–2160, https://doi.org/10.1093/bioinformatics/btg291
RankViaContact: ranking and visualization of amino acid contacts
Bairong Shen and Mauno Vihinen
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2161–2162, https://doi.org/10.1093/bioinformatics/btg293
Electrophoretic data classification for phylogenetics and biostatistics
Gianluigi Cardinali and others
Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2163–2165, https://doi.org/10.1093/bioinformatics/btg294
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