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Keyue Ding, Kaixin Zhou, Fuchu He, Yan Shen, LDA—a java-based linkage disequilibrium analyzer, Bioinformatics, Volume 19, Issue 16, November 2003, Pages 2147–2148, https://doi.org/10.1093/bioinformatics/btg276
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Abstract
Summary: We describe an integrated java-based program that provides elaborate graphic and plain-text output of pairwise linkage disequilibrium (LD) analysis of single nucleotide polymorphisms genotypic data. It is most suitable for molecular geneticists, who are focusing on LD measures estimation, statistical significance test and extent prediction.
Availability: The software is available at: http://www.chgb.org.cn/lda/lda.htm
Supplementary information: Detailed tutorials, LDA help system and examples are distributed within LDA software. For Macintosh OS X user, the Jre version 1.4 can be downloaded from http://connect.apple.com
To whom correspondence should be addressed.
The authors wish it to be known that, in their opinion, the first two authors should be regarded as joint First Authors.
Author notes
1Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences (CAMS) and Peking Union Medical College (PUMC), National Laboratory of Medical Molecular Biology, Beijing, 100005, People's Republic of China, 2Beijing Institute of radiation medicine, Beijing 100039, People's Republic of China and 3Chinese National Human Genome Center, Beijing 100176, People's Republic of China
