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Keywords: multidimensional scaling
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Journal Article
Classical multidimensional scaling on metric measure spaces
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Sunhyuk Lim and Facundo Mémoli
Information and Inference: A Journal of the IMA, Volume 13, Issue 2, June 2024, iaae007, https://doi.org/10.1093/imaiai/iaae007
Published: 08 May 2024
.... 2024 This article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( https://dbpia.nl.go.kr/pages/standard-publication-reuse-rights ) Abstract We study a generalization of the classical multidimensional scaling procedure (cMDS) which...
Journal Article
Multidimensional scaling for animal traits in the context of dynamic energy budget theory
Sebastiaan A L M Kooijman and others
Conservation Physiology, Volume 9, Issue 1, 2021, coab086, https://doi.org/10.1093/conphys/coab086
Published: 15 December 2021
... Licence v3.0 (http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/). Abstract The method of multidimensional scaling (MDS) has long existed, but could only recently be applied to animal traits in the context of dynamic energy budget (DEB) theory. The application became possible...
Journal Article
Assessing chromatin relocalization in 3D using the patient rule induction method
Mark R Segal
Biostatistics, Volume 24, Issue 3, July 2023, Pages 618–634, https://doi.org/10.1093/biostatistics/kxab033
Published: 08 September 2021
... ), followed by solving the multidimensional scaling (MDS; Hastie and others, 2009 ) problem: position points (corresponding to genomic loci) in 3D so that the resultant interpoint distances “best conform” to the distance matrix. A variety of methods have also been used for transforming...
Journal Article
Knowledge transfer profiles of public research organisations: the role of fields of knowledge specialisation
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Eva M de la Torre and others
Science and Public Policy, Volume 48, Issue 6, December 2021, Pages 860–876, https://doi.org/10.1093/scipol/scab061
Published: 20 August 2021
... to transfer knowledge. We develop a conceptual framework linking PROs’ specialisation in different fields of knowledge to their profiles of KT engagement and validate it empirically using a six-year panel data set of 33 PROs in the UK. We use multidimensional scaling and cluster analysis techniques...
Journal Article
DISSEQT—DIStribution-based modeling of SEQuence space Time dynamics
R Henningsson and others
Virus Evolution, Volume 5, Issue 2, July 2019, vez028, https://doi.org/10.1093/ve/vez028
Published: 05 August 2019
... reconstructed to include minority variants, can predict phenotype from genotype with high accuracy. multidimensional scaling quasispecies NGS applied mathematics Microbial infections, by viruses and bacteria, initially colonize their host as small, quite homogeneous populations, but short generation times...
Journal Article
Evaluating the implementation and use of the regional cancer plan in Western Sweden through concept mapping
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Frida Smith and others
International Journal for Quality in Health Care, Volume 31, Issue 7, August 2019, Pages 44–52, https://doi.org/10.1093/intqhc/mzy241
Published: 21 December 2018
... multidimensional scaling cancer care hierarchical cluster analysis In Sweden, the vast majority of cancer care is financed by regional tax and delivered by each of 21 counties that have independent financial responsibility for this care. In 2007, the government appointed a commission, ‘A National Cancer...
Journal Article
Studies in the Robustness of Multidimensional Scaling: Procrustes Statistics
Robin Sibson
Journal of the Royal Statistical Society: Series B (Methodological), Volume 40, Issue 2, January 1978, Pages 234–238, https://doi.org/10.1111/j.2517-6161.1978.tb01669.x
Published: 05 December 2018
...Robin Sibson J. R. Statist. Soc. B (1978), 40, No.2, pp. 234-238 Studies in the Robustness of Multidimensional Scaling: Procrustes Statistics By ROBIN SIBSON School of Mathematics, University of Bath [Received August 1977. Revised January 19781 SUMMARY This series of papers is devoted...
Journal Article
Studies in the Robustness of Multidimensional Scaling: Perturbational Analysis of Classical Scaling
Robin Sibson
Journal of the Royal Statistical Society: Series B (Methodological), Volume 41, Issue 2, January 1979, Pages 217–229, https://doi.org/10.1111/j.2517-6161.1979.tb01076.x
Published: 05 December 2018
... of papers is devoted to the investigation of the extent to which the accuracy of operation of multidimensional scaling methods can be put onto a quantitative footing. This second paper investigates the response of the classical scaling method to small errors by making expansions in powers of the error term...
Journal Article
Some Statistical Approaches to Multidimensional Scaling Data
J. O. Ramsay
Royal Statistical Society. Journal. Series A: General, Volume 145, Issue 3, May 1982, Pages 285–303, https://doi.org/10.2307/2981865
Published: 05 December 2018
... Statistical problems associated with multidimensional scaling are reviewed. Indices of similarity or dissimilarity have been fitted by two classes of models: point representation using a distance measure and vector representation using an inner product. In addition to these parameters representing stimulus...
Journal Article
Defining typologies of universities through a DEA-MDS analysis: An institutional characterization for formative evaluation purposes
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Eva M de la Torre and others
Research Evaluation, Volume 27, Issue 4, October 2018, Pages 388–403, https://doi.org/10.1093/reseval/rvy024
Published: 28 August 2018
...Eva M de la Torre; Fernando Casani; Marti Sagarra Corresponding author. Email: eva.torre@uam.es third mission typologies of universities higher education evaluation data envelopment analysis multidimensional scaling Spanish higher education system © The Author(s) 2018. Published by Oxford...
Journal Article
A statistical analysis of the chansons of Arnold and Hugo de Lantins
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Michael W Beauvois
in
Early Music
Early Music, Volume 45, Issue 4, November 2017, Pages 527–543, https://doi.org/10.1093/em/cax108
Published: 30 January 2018
... dates by quantitatively evaluating the differences between each song using multidimensional scaling. The variables chosen for analysis acknowledged that the dyadic counterpoint of the superius–tenor duet (the Gerüstsatz) forms the contrapuntal and harmonic core of an early 15th-century chanson...
Journal Article
Limited Impact of a Fall-Seeded, Spring-Terminated Rye Cover Crop on Beneficial Arthropods
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Mike W. Dunbar and others
Environmental Entomology, Volume 46, Issue 2, April 2017, Pages 284–290, https://doi.org/10.1093/ee/nvw177
Published: 03 March 2017
.... community composition IPM natural enemy nonmetric multidimensional scaling pitfall trap Greater plant diversity within agroecosystems, compared with monocultures, can result in decreased pest abundance and increased abundance of beneficial arthropods ( Andow 1991a , Landis et al. 2000 ). Plant...
Journal Article
Intraspecific morphological variation of the middle ear in the European badger, Meles meles (Carnivora: Mustelidae)
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David Rozen-Rechels and others
Biological Journal of the Linnean Society, Volume 119, Issue 1, 1 September 2016, Pages 106–116, https://doi.org/10.1111/bij.12800
Published: 22 July 2016
... meles. Our study includes two types of statistical methods. We first compared the mean of a subjectively chosen measure between individuals of the same species and between individuals of different species. We then used a multidimensional scaling procedure to cluster individuals according to different...
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Statistical analyses in trials for the comprehensive understanding of organogenesis and histogenesis in humans and mice
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Hiroki Otani and others
The Journal of Biochemistry, Volume 159, Issue 6, June 2016, Pages 553–561, https://doi.org/10.1093/jb/mvw020
Published: 02 March 2016
...-type analyses using mathematical models. Here, we introduce several of our trials for the statistical analysis of organogenesis and histogenesis of human and mouse embryos and foetuses. Multidimensional scaling has been applied to prove the existence and examine the mode of interkinetic nuclear...
Journal Article
Assessing uncertainty of a multispecies size-spectrum model resulting from process and observation errors
Chongliang Zhang and others
ICES Journal of Marine Science, Volume 72, Issue 8, September/October 2015, Pages 2223–2233, https://doi.org/10.1093/icesjms/fsv086
Published: 19 May 2015
... to help narrow the gap in scientific knowledge and reduce the uncertainty in fisheries management. ecological indicator Monte Carlo simulation multidimensional scaling observation error parameter imprecision process error size-spectrum model uncertainty Fishing activity is believed to have a great...
Journal Article
Visualized analysis of cellular fatty acid profiles of Vibrio parahaemolyticus strains under cold stress
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Juntao Jia and others
FEMS Microbiology Letters, Volume 357, Issue 1, August 2014, Pages 92–98, https://doi.org/10.1111/1574-6968.12498
Published: 01 August 2014
... using gas chromatography/mass spectrometry, and the results were compared with those of the controls. All the fatty acid profiles obtained were visualized by multidimensional scaling (MDS) and self-organized map (SOM). It was observed that the fatty acid profiles of V. parahaemolyticus...
Journal Article
A Statistical Approach to Set Classification by Feature Selection with Applications to Classification of Histopathology Images
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Sungkyu Jung and Xingye Qiao
in
Biometrics
Biometrics, Volume 70, Issue 3, September 2014, Pages 536–545, https://doi.org/10.1111/biom.12164
Published: 03 March 2014
... components (PCs; Jolliffee, 2002 ). The proposed feature extraction–selection method transforms empirical PC directions and subspaces into feature vectors so that conventional classifiers can be applied in the transformed space. Multidimensional scaling ( Borg and Groenen, 2005 ) is extensively used...
Journal Article
Vertical distribution of bacterioplankton in Lake Averno in relation to water chemistry
Patrizia Paganin and others
FEMS Microbiology Ecology, Volume 84, Issue 1, April 2013, Pages 176–188, https://doi.org/10.1111/1574-6941.12048
Published: 01 April 2013
... of physico-chemical parameters as a statistically significant relationship between most of them with grouping of specific taxonomic units was observed. Bacteria Archaea denaturing gradient gel electrophoresis nonlinear multidimensional scaling lake water column environmental parameters...
Journal Article
A Hierarchical Semiparametric Model for Incorporating Intergene Information for Analysis of Genomic Data
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Long Qu and others
in
Biometrics
Biometrics, Volume 68, Issue 4, December 2012, Pages 1168–1177, https://doi.org/10.1111/j.1541-0420.2012.01778.x
Published: 20 September 2012
... Journals Publication Model ( https://dbpia.nl.go.kr/journals/pages/open_access/funder_policies/chorus/standard_publication_model ) False discovery rates Gene ontology Hierarchical model Microarray Multidimensional scaling Nonparametric regression USDA 10.13039/100000199 NRI-2005-3560415618 2008...
Journal Article
Floral and vegetative cues in oil-secreting and non-oil-secreting Lysimachia species
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I. Schäffler and others
Annals of Botany, Volume 110, Issue 1, 1 July 2012, Pages 125–138, https://doi.org/10.1093/aob/mcs101
Published: 25 May 2012
... hexagon oil secretion correlated evolution flower and vegetative scent headspace analysis GC-MS Lysimachia multidimensional scaling oil-bee Macropis phylogeny spectral photometry Many flowering plant species rely on animal pollinators for their sexual reproduction...
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