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Keywords: epigenetics
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Journal Article
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Rose Schrott and others
Environmental Epigenetics, dvaf010, https://doi.org/10.1093/eep/dvaf010
Published: 24 April 2025
... via the Permissions link on the article page on our site–for further information please contact [email protected]. Abstract Gestation is a vulnerable window when exposure to per- and polyfluoroalkyl substances (PFAS) may impact child development and health. Epigenetic modification...
Journal Article
Hua Zhong and others
Human Molecular Genetics, ddaf053, https://doi.org/10.1093/hmg/ddaf053
Published: 23 April 2025
... pathogenesis and identifying potential therapeutic targets. Brain-specific epigenetics Alzheimer’s disease risk DNA methylation biomarkers Mendelian randomization Gene expression regulation University of Hawai'i Cancer Center Alzheimer’s disease (ad) is a devastating neurodegenerative disorder...
Journal Article
Shuo Li and Pei Fen Kuan
Briefings in Bioinformatics, Volume 26, Issue 2, March 2025, bbaf170, https://doi.org/10.1093/bib/bbaf170
Published: 16 April 2025
... improved performance in identifying cell-type-specific differential methylation CpGs. DNA methylation cell-type-specific differential CpGs bulk tissue epigenetics EWAS National Institute for Occupational Safety and Health 10.13039/100000125 National Institute of Aging U01OH012466...
Journal Article
Luisa Maria Sandalio
Journal of Experimental Botany, Volume 76, Issue 6, 9 April 2025, Pages 1482–1485, https://doi.org/10.1093/jxb/eraf060
Published: 09 April 2025
... epigenetic changes, although the exact mechanisms remained unclear ( Shen et al., 2016 ; Ramakrishnan et al., 2022 ). However, the interplay of redox regulation with DNA methylation, histone methylation and deacetylation, and miRNA biogenesis has been reported ( Auverlot et al...
Journal Article
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Vincent Kiplangat Bett and others
Molecular Biology and Evolution, msaf085, https://doi.org/10.1093/molbev/msaf085
Published: 09 April 2025
... for all genes, which were correlated with transcript level abundances. Differences in the occupancy of the profiled epigenetic marks between sexes were associated with differential gene expression between males and females. Finally, we found a significant enrichment of the permissive H4K16ac histone mark...
Journal Article
Eric Lieberman Greer and others
Published: 09 April 2025
... into nucleosomes independently of DNA replication. Nucleosomes with canonical histones or histone variants can have differential epigenetic impact ( Henikoff and Smith 2015 ). Posttranslational modifications to the histone tails can occur at any point and help to regulate the chromatin structure and impact gene...
Journal Article
Samuel Burrows and others
Journal of Experimental Botany, eraf016, https://doi.org/10.1093/jxb/eraf016
Published: 07 April 2025
... variation for crop breeding, however the lethality of epigenetic mutants in crop species has hindered its investigation. Here, we exploit partial redundancy between homoeologues in polyploid wheat to generate viable mutants in the DNA methyltransferase 1-1 (MET1-1) gene with altered...
Journal Article
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Ting Guo and others
Endocrine Reviews, bnaf011, https://doi.org/10.1210/endrev/bnaf011
Published: 03 April 2025
... and potential targeted therapeutic strategies for POI. In this review, we summarize the epidemiological characteristics of POI, as well as progress in genetic and epigenetic etiologies, and discuss advances in pharmacology and material science that will likely contribute to new interventions for ovarian aging...
Journal Article
Ying Zhang and Marc André Sirard
Biology of Reproduction, ioaf056, https://doi.org/10.1093/biolre/ioaf056
Published: 29 March 2025
[email protected] 2025 This article is published and distributed under the terms of the Oxford University Press, Standard Journals Publication Model ( https://dbpia.nl.go.kr/pages/standard-publication-reuse-rights ) Abstract In recent years, the study of bovine sperm epigenetics has garnered increasing...
Journal Article
Anna-Lee C Thompson and others
Microscopy and Microanalysis, Volume 31, Issue 2, April 2025, ozaf017, https://doi.org/10.1093/mam/ozaf017
Published: 28 March 2025
...Anna-Lee C Thompson; Judith L M Wopereis; Yonas I Tekle; Laura A Katz Fig. 1. Graphical representation of microscopy techniques with applications to visualize epigenetic targets. Bolded and enlarged techniques are discussed in this review. Super-resolution methods can be adapted from widefield...
Journal Article
Romy Petroll and others
Molecular Biology and Evolution, Volume 42, Issue 4, April 2025, msaf064, https://doi.org/10.1093/molbev/msaf064
Published: 25 March 2025
... permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact [email protected]. Abstract Epigenetic silencing is essential for regulating gene expression and cellular diversity in eukaryotes. While DNA...
Journal Article
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Cody L Nesvick and others
Neuro-Oncology, noaf081, https://doi.org/10.1093/neuonc/noaf081
Published: 23 March 2025
... residual promoter-proximal TF function in ATRT. Graphical abstract Graphical Abstract ATRT rhabdoid tumor epigenetics chromatin transcription factors Accepted Manuscript SWI/SNF complexes govern ontology-specific transcription factor function in MYC-subtype atypical teratoid rhabdoid tumor Cody L...
Journal Article
Zhibo Wang and Rebecca S Bart
Journal of Experimental Botany, eraf131, https://doi.org/10.1093/jxb/eraf131
Published: 20 March 2025
... change the DNA sequence of an organism. This powerful technology now fuels basic biology discovery and tangible crop improvement efforts. There is a less well understood layer of information encoded in genomes, known collectively as ‘epigenetics’, that impacts gene expression, without changing the DNA...
Journal Article
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Colleen M Roark and others
Clinical and Experimental Immunology, uxaf016, https://doi.org/10.1093/cei/uxaf016
Published: 19 March 2025
... and facial anomalies (ICF) syndrome inborn errors of immunity mass cytometry ZBTB24 epigenetics Accepted Manuscript In-depth immune profiling of a patient with immunodeficiency, centromeric instability, and facial anomalies syndrome type 2 caused by a novel mutation in ZBTB24. Colleen M Roark1,2, Diana...
Journal Article
Leticia T Casarotto and others
Biology of Reproduction, ioaf047, https://doi.org/10.1093/biolre/ioaf047
Published: 16 March 2025
... hypothesis suggests that epigenetic adaptations occur in fetal DNA as a response to environmental influences. The review also emphasizes the role of the mechanism associated with possible epigenetic effects in the placenta, mediating the effects of maternal stress on the fetus, impacting gene expression...
Journal Article
Hector Mendoza and others
G3 Genes|Genomes|Genetics, jkaf057, https://doi.org/10.1093/g3journal/jkaf057
Published: 15 March 2025
... mechanism that depends on the generation of small RNA molecules that leads to the degradation of the targeted messenger RNAs (mRNAs). Nuclear RNAi is a unique process that triggers regulation through epigenetic alterations to the genome. This pathway has been extensively characterized in Caenorhabditis...
Journal Article
René S Shahmohamadloo and others
Published: 11 March 2025
...René S Shahmohamadloo; John M Fryxell; Seth M Rudman; Henrique Teotonio; Jason Wolf Figure 1. A schematic diagram illustrates the experimental design testing transgenerational epigenetic inheritance (TEI) in Daphnia magna. Eight genotypes were initially reared on either a Chlorella-only...
Journal Article
Maián Garro and others
Journal of Experimental Botany, eraf105, https://doi.org/10.1093/jxb/eraf105
Published: 10 March 2025
... these epigenetic changes provide an adaptative advantage remains unclear. Here, we provide evidence that DNAme is required to regulate thermomorphogenesis in Arabidopsis. Hypomethylated drm1 drm2 cmt3 mutants and seedlings treated with 5-azacytidine to block DNAme exhibited reduced hypocotyl growth...
Journal Article
Erica C Jansen and others
Published: 03 March 2025
...-reuse-rights ) Abstract Study Objectives To investigate associations between adolescent sleep duration and timing, and blood leukocyte DNA methylation, one type of epigenetic modification that may respond to changes in sleep. Methods Cross-sectional epigenome-wide analysis of DNA methylation...
Journal Article
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Guohao Han and others
Genomics, Proteomics & Bioinformatics, qzaf016, https://doi.org/10.1093/gpbjnl/qzaf016
Published: 28 February 2025
..., integrated gene annotation, and quantitative trait locus information. Furthermore, various “Explore” and “Browse” functions have been established for user-friendly access to omics information. PIGOME implemented several tools to visualize genomic variants, gene expression, and epigenetic signals of a given...