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Keywords: coding
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Journal Article
Lang Peng and others
Insect Systematics and Diversity, Volume 9, Issue 2, March 2025, ixaf009, https://doi.org/10.1093/isd/ixaf009
Published: 11 April 2025
..., including rearrangement of protein-coding genes (PCGs) and tRNAs, were found. Surprisingly, in addition to the standard 22 tRNAs, a tandem duplication trnT-trnP has occurred in Lype sagittalis Peng & Sun, 2024, a unique finding in Trichoptera. Furthermore, a rearrangement...
Journal Article
Sophie Siestrup and others
Cerebral Cortex, Volume 35, Issue 4, April 2025, bhaf078, https://doi.org/10.1093/cercor/bhaf078
Published: 11 April 2025
... for unexpected omissions and unexpected presentations of visual stimuli when compared to expected stimuli. Our results also underlined that these effects occur independently of stimulus repetition effects. Altogether, these findings support a predictive coding model of cognition, highlighting the importance...
Journal Article
Chao Huang and others
Cerebral Cortex, Volume 35, Issue 4, April 2025, bhaf073, https://doi.org/10.1093/cercor/bhaf073
Published: 08 April 2025
... in the periphery, but only in their postsynaptic potentials, resulting in lossless information processing for the sense of touch in the primary somatosensory cortex. action potential generation excitatory and inhibitory populations information processing spike and rate coding touch perception Whitehall...
Journal Article
João P Monteiro and others
Cardiovascular Research, cvaf043, https://doi.org/10.1093/cvr/cvaf043
Published: 04 April 2025
... method, under terminal isoflurane anaesthesia. Data supporting the study are available from the corresponding authors on request. This study was supported by the British Heart Foundation (ReGenLnc) grant ‘Exploiting endothelial long non-coding RNAs to promote regenerative angiogenesis in the damaged...
Journal Article
Yuyanan Zhang and others
Schizophrenia Bulletin, sbaf026, https://doi.org/10.1093/schbul/sbaf026
Published: 06 March 2025
... cognitive tests. Study Results Symbol Coding played a central role and exhibited downstream associations with other cognitive tests in both patients and controls. Network analysis showed significant between-group edge differences in undirected networks, particularly between Continuous Performance...
Journal Article
Selvi Celik and others
Cardiovascular Research, cvaf037, https://doi.org/10.1093/cvr/cvaf037
Published: 05 March 2025
... isoforms with variable size and elasticity, but the mechanisms whereby TTN splice factors regulate exon usage and thereby determining cardiomyocyte passive stiffness and diastolic function, is not well understood. Non-coding RNA transcripts from the antisense strand of protein-coding genes have been shown...
Journal Article
Robert W Hurley and others
Pain Medicine, pnaf019, https://doi.org/10.1093/pm/pnaf019
Published: 28 February 2025
...) and managed all review procedures using Covidence systematic review software to ensure systematic documentation and reproducibility. 36 Figure 1. PRISMA flow diagram for scoping review of OM coding practices. Flow diagram following PRISMA-ScR guidelines showing the systematic search and selection...
Journal Article
Bastien Boussat and others
Health Affairs Scholar, Volume 3, Issue 3, March 2025, qxaf037, https://doi.org/10.1093/haschl/qxaf037
Published: 24 February 2025
... practical knowledge from their peers, adopt best practices, and collaborate on solutions to shared challenges, such as data mapping, workforce training, and enhancing coding accuracy. In addition to knowledge exchange, WHO-FIC's collaborative model could be instrumental in establishing standardized...
Journal Article
EDITOR'S CHOICE
Brian Butterworth
Cerebral Cortex, Volume 35, Issue 2, February 2025, bhaf015, https://doi.org/10.1093/cercor/bhaf015
Published: 11 February 2025
... be found in animals with no opportunity to learn. This leaves open important questions: How do numerosity-selective neurons code for numerosities? Is the code the same in different species? How do the neurons participate in arithmetical operations? evolution innateness neuronal coding number sense...
Journal Article
Anne-Catherine Dens and others
Rheumatology Advances in Practice, Volume 9, Issue 1, 2025, rkaf016, https://doi.org/10.1093/rap/rkaf016
Published: 07 February 2025
...-administered occupational history questionnaire that allows for International Standard Classification of Occupations 1968 (ISCO-68) coding and exposure assessment as a cost-effective alternative to traditional interviews. Methods Seventy RA patients participated by completing a standardized telephone...
Journal Article
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Hitesh Kore and others
Genomics, Proteomics & Bioinformatics, qzaf004, https://doi.org/10.1093/gpbjnl/qzaf004
Published: 07 February 2025
... was to identify all the protein-coding genes. There are ∼ 20,500 protein-coding genes annotated in human reference databases. However, in the last few years, proteogenomics studies have predicted thousands of novel protein-coding regions including low molecular weight proteins encoded by small open reading frames...
Journal Article
Benjamin J M Tremblay and Julia I Qüesta
Journal of Experimental Botany, eraf051, https://doi.org/10.1093/jxb/eraf051
Published: 07 February 2025
... methylation, different histone variants and modifications, and non-coding regulatory RNAs. Studying these mechanisms is essential for understanding the regulation of gene expression during germination. In this review, we summarize our current knowledge of the mechanisms regulating seed biology in Arabidopsis...
Journal Article
Vilsa E Curto and others
Health Affairs Scholar, Volume 3, Issue 1, January 2025, qxae176, https://doi.org/10.1093/haschl/qxae176
Published: 16 January 2025
... material for details). 5 To assess the sensitivity of our results to defining the top third of HCCs as “discretionary,” we also conducted sensitivity analyses with 2 alternative cutoffs used to define “discretionary” HCCs: the top 20% and the top 40%. The coding inflation rate can...
Journal Article
Miriam Sturdee
Interacting with Computers, iwae063, https://doi.org/10.1093/iwc/iwae063
Published: 15 January 2025
... is an integral part of qualitative research, yet it is not always clear to researchers how to use or interpret it once gathered. Existing methods for qualitative data analysis largely rely on textual approaches such as thematic analysis, or grounded theory. Open coding is a term that is frequently used...
Journal Article
John F McDonald
Molecular Biology and Evolution, Volume 42, Issue 1, January 2025, msae269, https://doi.org/10.1093/molbev/msae269
Published: 07 January 2025
... has been focused on the contribution of stress-induced non-coding RNAs (ncRNAs) in the activation of epigenetic changes associated with elevated mutation rates and the acquisition of environmentally adaptive traits. Examples of this process are presented and combined with more recent findings...
Journal Article
Edgar G Gutiérrez and Jorge Ortega
Journal of Mammalogy, gyae144, https://doi.org/10.1093/jmammal/gyae144
Published: 19 December 2024
... codificadores de proteínas mitocondriales en quirópteros, arrojando luz sobre su papel potencial en el mantenimiento del vuelo activo. bats mitochondrial genome oxidative phosphorylation positive selective pressure protein-coding genes Vespertilionidae fosforilación oxidativa genes codificadores de...
Journal Article
James Wright and Paul Bourke
Cerebral Cortex, Volume 34, Issue 10, October 2024, bhae416, https://doi.org/10.1093/cercor/bhae416
Published: 28 October 2024
... the typical order and response characteristics of columnar and noncolumnar cortex. free energy principle predictive coding Markov blankets cortical development structural model Frank Hixon Fund of the California Institute of Technology Mental Health Research Fund (UK) and Wellcome Trust...
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Journal Article
Bernhard Pastötter and others
Brain Communications, Volume 6, Issue 5, 2024, fcae301, https://doi.org/10.1093/braincomms/fcae301
Published: 09 October 2024
... information with motor processes. Until recently, such findings have primarily been interpreted along a predictive coding framework of FMD, 6 which proposes a down-weighting of ‘bottom-up’ sensory information in favour of ‘top-down’ predictions (prior beliefs, feedforward information...
Journal Article
Michelle Grunin and others
Human Molecular Genetics, Volume 33, Issue 24, 15 December 2024, Pages 2085–2093, https://doi.org/10.1093/hmg/ddae141
Published: 26 September 2024
...-specific methodology, including X-specific GWAS (XWAS) via variant and gene analysis, expression and eQTL analysis, non-coding RNA investigation including microRNA and lncRNA that comprise so much of the X chromosome, pathway and interaction analysis, and epistasis. This represents an exhaustive genetic...
Journal Article
Severin Uebbing and others
Molecular Biology and Evolution, Volume 41, Issue 10, October 2024, msae199, https://doi.org/10.1093/molbev/msae199
Published: 20 September 2024
... in mammals. Conserved non-coding sequences sequence acceleration enhancer evolution mammal evolution notch signaling Enhancer elements contain the genetic information to control gene expression in a cell- and time point-specific manner. Evolutionary change within enhancer sequences is therefore...