GigaScience

Image segmentation of treated and untreated tumor spheroids by fully convolutional networks

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The haplotype-resolved T2T genome for Bauhinia × blakeana sheds light on the genetic basis of flower heterosis

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RWRtoolkit: multi-omic network analysis using random walks on multiplex networks in any species

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Overture: an open-source genomics data platform

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Interspecific hybridization in Brassica species leads to changes in agronomic traits through the regulation of gene expression by chromatin accessibility and DNA methylation

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GeneSetCart: assembling, augmenting, combining, visualizing, and analyzing gene sets

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Network-based anomaly detection algorithm reveals proteins with major roles in human tissues

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Phased high-quality genome of the gymnosperm Himalayan Yew assists in paclitaxel pathway exploration

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Defining the limits of plant chemical space: challenges and estimations

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VCF2Dis: an ultra-fast and efficient tool to calculate pairwise genetic distance and construct population phylogeny from VCF files

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The molecular basis of octocoral calcification revealed by genome and skeletal proteome analyses

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Telomere-to-telomere genome assembly of Electrophorus electricus provides insights into the evolution of electric eels

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EnrichDO: a global weighted model for Disease Ontology enrichment analysis

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Observational, causal relationship and shared genetic basis between cholelithiasis and gastroesophageal reflux disease: evidence from a cohort study and comprehensive genetic analysis

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High-fidelity wheat plant reconstruction using 3D Gaussian splatting and neural radiance fields

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Correction to: “UDE DIATOMS in the Wild 2024”: a new image dataset of freshwater diatoms for training deep learning models

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Healthy microbiome—moving towards functional interpretation

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Hi-GDT: A Hi-C-based 3D gene domain analysis tool for analyzing local chromatin contacts in plants

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How to select predictive models for decision-making or causal inference

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