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Plant Physiology Cover Image for Volume 162, Issue 4
Volume 162, Issue 4
August 2013
ISSN 0032-0889
EISSN 1532-2548

Volume 162, Issue 4, August 2013

ON THE INSIDE

Peter V. Minorsky
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1765–1766, https://doi.org/10.1104/pp.113.900468

EDITORIAL

Mike Blatt
Plant Physiology, Volume 162, Issue 4, August 2013, Page 1767, https://doi.org/10.1104/pp.113.900467

TOPICAL REVIEWS

Hannes Claeys and Dirk Inzé
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1768–1779, https://doi.org/10.1104/pp.113.220921

A comprehensive overview is presented of the effects of water limitation on growing shoot tissues, with a focus on molecular mechanisms and networks restricting growth, adaptations for maintained growth, and the molecular interplay between growth and stress tolerance with potential for crop engineering.

John R. Evans
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1780–1793, https://doi.org/10.1104/pp.113.219006

Photosynthesis is the basis of plant growth, and it is argued that improving photosynthesis can contribute toward greater food security in the coming decades as world population increases.

BREAKTHROUGH TECHNOLOGIES

Huan Shu and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1794–1801, https://doi.org/10.1104/pp.113.220400

Differential DNA accessibility, which is established by local chromatin environments and strongly affects gene expression, can be assayed utilizing DNase I digestion coupled to detection by PCR or on tiling arrays.

Michael P. Pound and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1802–1814, https://doi.org/10.1104/pp.113.221531

RootNav is a novel image analysis tool that facilitates the accurate recovery of root system architectures from images.

Peiyong Xin and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2056–2066, https://doi.org/10.1104/pp.113.221952

A simple and high-sensitivity quantitation strategy based on simplified extraction, purification, and derivatization processes enables quantification of brassinosteroids in small amounts of plant tissue.

RESEARCH REPORTS

Mario Serrano and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1815–1821, https://doi.org/10.1104/pp.113.218156

The synthesis of the immune signal salicylic acid is abolished by a mutation in a hitherto unknown transporter protein. This article describes the transporter localization at the chloroplast and its function in the export of salicylic acid from the chloroplast.

Article

BIOCHEMISTRY AND METABOLISM

Gerhard Obermeyer and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1822–1833, https://doi.org/10.1104/pp.113.219857

Pollen metabolism shows a dynamic transition from pollen grain germination to pollen tube growth and can quickly compensate inhibition of the oxidative phosporylation.

Carmen M. Pérez-Delgado and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1834–1848, https://doi.org/10.1104/pp.113.217216

Transcriptomic and metabolomic analysis of a plastidic glutamine synthetase mutant shows a coordinate repression of photorespiratory genes and accumulation of several key metabolites.

Christian Maximilian Prasch and Uwe Sonnewald
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1849–1866, https://doi.org/10.1104/pp.113.221044

Arabidopsis plants exposed to triple stress are characterized by transcript responses not predictable from single stress treatments that significantly alter the expression of genes involved in signaling and defense processes.

Hui Dong and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1867–1880, https://doi.org/10.1104/pp.113.217604

Disruption of the OsClpP6 gene causes a virescent-yellow leaf phenotype, demonstrating an important role of caseinolytic proteases in regulating chloroplast biogenesis and leaf development in rice.

Nak Hyun Kim and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2067–2083, https://doi.org/10.1104/pp.113.217372

Pepper arginine decarboxylase, CaADC1, which interacts with Xanthomonas effector AvrBsT, induces increased polyamine and γ-aminobutyric acid levels, and triggers nitric oxide and reactive oxygen species bursts, ultimately leading to plant cell death and defense responses.

CELL BIOLOGY

Mistianne Feeney and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1881–1896, https://doi.org/10.1104/pp.113.220996

A transcription factor triggers embryonic characteristics in Arabidopsis vegetative organs.

Jia-Gang Wang and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1897–1910, https://doi.org/10.1104/pp.113.221051

HAPLESS13 is the Arabidopsis 1µ adaptin protein and affects multiple developmental and cellular processes by sorting membrane proteins, including auxin and brassinosteroid signaling elements, at the trans-Golgi network/early endosome.

Christoph A. Bücherl and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1911–1925, https://doi.org/10.1104/pp.113.220152

Initiation of brassinosteroid signal transduction involves a small number of preassembled BRI1-BAK1(SERK3) heterooligomers.

Patrick J. Horn and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1926–1936, https://doi.org/10.1104/pp.113.222455

A new class of lipid droplet-associated proteins in nonseed tissues is identified by integrated omics approaches.

ECOPHYSIOLOGY AND SUSTAINABILITY

Yoshinao Ohyama and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1937–1946, https://doi.org/10.1104/pp.113.218958

Diverse land plant species possess similar proteins that function in transcriptional regulation of aluminum tolerance.

Xiao Fang Zhu and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1947–1955, https://doi.org/10.1104/pp.113.219147

Plants must coordinate exclusion and internal detoxification to reduce aluminum toxicity effectively.

Peng Jin and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2084–2094, https://doi.org/10.1104/pp.113.219543

Ocean acidification and fast mixing or fluctuation of solar radiation could act synergistically to lower carbon fixation by G. oceanica, though ocean acidification may decrease UVB-related photochemical inhibition.

Christoph Andreas Lehmeier and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2095–2105, https://doi.org/10.1104/pp.113.219311

Nitrogen stress has strong effects on the size and turnover of nitrogen pools supplying leaf growth of a grass but does not alter the relative contributions of currently assimilated and remobilized nitrogen for leaf growth.

GENES, DEVELOPMENT, AND EVOLUTION

Chengyun Han and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1956–1964, https://doi.org/10.1104/pp.113.216804

Disrupting fumarylacetoacetate hydrolase leads to cell death in Arabidopsis, indicating that the Tyr degradation pathway is essential for plant survival under short-day conditions.

Wen-Bo Jiang and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1965–1977, https://doi.org/10.1104/pp.113.217703

Brassinosteroid regulates Arabidopsis seed size and shape by transcriptionally modulating specific seed developmental pathways.

Ming-Kun Chen and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1978–1991, https://doi.org/10.1104/pp.113.218198

ERECTA family receptors are involved in the regulation of phyllotaxy and leaf initiation.

SIGNALING AND RESPONSE

René Richter and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 1992–2004, https://doi.org/10.1104/pp.113.219238

The transcription factor SOC1 is regulated by two GATA transcription factors for the control of flowering while the GATAs are controlled by SOC1 to control greening and cold tolerance.

Kyoko Sugawara and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2005–2014, https://doi.org/10.1104/pp.113.218586

A bacterial peptide effector undergoes proteolytic processing in plants and releases small peptides that alter plant morphology.

Irene García and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2015–2027, https://doi.org/10.1104/pp.113.219436

The analysis of a mutant in the main enzyme responsible for cyanide detoxification, the mitochondrial β-cyanoalanine synthase, uncovers a new signaling role for cyanide in the plant response to pathogens.

Nicky J. Atkinson and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2028–2041, https://doi.org/10.1104/pp.113.222372

Arabidopsis responds to simultaneous water stress and nematode infection by activating a unique program of gene expression that is distinct from the response to individual stresses.

Marie Turner and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2042–2055, https://doi.org/10.1104/pp.113.220699

Analysis of symbiotic nodulation indicates low auxin activity and auxin hypersensitivity during nodule initiation, and regulatory feedback with auxin and cytokinin during nodule development.

Son Truong Dinh and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2106–2124, https://doi.org/10.1104/pp.113.221150

By enhancing abscisic acid levels, a novel herbivore elicitor-regulated protein plays an essential role in efficient defense of metabolite accumulation against herbivores in plants.

Tohru Ariizumi and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2125–2139, https://doi.org/10.1104/pp.113.219451

GA signaling controls seed germination in the sly1 mutant background, in which DELLA repressors cannot be destroyed by the ubiquitin-proteasome pathway.

SYSTEMS AND SYNTHETIC BIOLOGY

Meiyappan Lakshmanan and others
Plant Physiology, Volume 162, Issue 4, August 2013, Pages 2140–2150, https://doi.org/10.1104/pp.113.220178

A metabolic/regulatory network of rice incorporates two important tissue types, germinating seeds and photorespiring leaves, is validated through experiments with rice suspension cultures, and applied to analyze metabolic capability under flooding and drought conditions.

ADDENDA

Plant Physiology, Volume 162, Issue 4, August 2013, Page 2151, https://doi.org/10.1104/pp.113.900469
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