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CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov–Arnold network

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Pawel Pratyush and others

in Bioinformatics

Bioinformatics, Volume 41, Issue 4, April 2025, btaf124, https://doi.org/10.1093/bioinformatics/btaf124

Published: 21 March 2025

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Journal Article

LMCrot: an enhanced protein crotonylation site predictor by leveraging an interpretable window-level embedding from a transformer-based protein language model

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Pawel Pratyush and others

in Bioinformatics

Bioinformatics, Volume 40, Issue 5, May 2024, btae290, https://doi.org/10.1093/bioinformatics/btae290

Published: 25 April 2024

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Journal Article

LMNglyPred: prediction of human N-linked glycosylation sites using embeddings from a pre-trained protein language model Get access

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Subash C Pakhrin and others

in Glycobiology

Glycobiology, Volume 33, Issue 5, May 2023, Pages 411–422, https://doi.org/10.1093/glycob/cwad033

Published: 17 April 2023

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Journal Article

GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool

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Elijah A MacCarthy and others

in Bioinformatics

Bioinformatics, Volume 38, Issue 6, March 2022, Pages 1754–1755, https://doi.org/10.1093/bioinformatics/btab871

Published: 03 January 2022

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Journal Article

Recent advances in sequence-based protein structure prediction

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Dukka B KC

in Briefings in Bioinformatics

Briefings in Bioinformatics, Volume 18, Issue 6, November 2017, Pages 1021–1032, https://doi.org/10.1093/bib/bbw070

Published: 25 August 2016

Journal Article

The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches

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Ishita K. Khan and others

in GigaScience

GigaScience, Volume 4, Issue 1, December 2015, s13742-015-0083-4, https://doi.org/10.1186/s13742-015-0083-4

Published: 14 September 2015

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CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov–Arnold network

LMCrot: an enhanced protein crotonylation site predictor by leveraging an interpretable window-level embedding from a transformer-based protein language model

LMNglyPred: prediction of human N-linked glycosylation sites using embeddings from a pre-trained protein language model Get access

GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool

Recent advances in sequence-based protein structure prediction

The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches

Modify your search

Publication date

CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov–Arnold network Open Access

LMCrot: an enhanced protein crotonylation site predictor by leveraging an interpretable window-level embedding from a transformer-based protein language model Open Access

LMNglyPred: prediction of human N-linked glycosylation sites using embeddings from a pre-trained protein language model Get access

GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool Free

Recent advances in sequence-based protein structure prediction Free

The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches Open Access

This Feature Is Available To Subscribers Only

CaLMPhosKAN: prediction of general phosphorylation sites in proteins via fusion of codon aware embeddings with amino acid aware embeddings and wavelet-based Kolmogorov–Arnold network

LMCrot: an enhanced protein crotonylation site predictor by leveraging an interpretable window-level embedding from a transformer-based protein language model

GPU-I-TASSER: a GPU accelerated I-TASSER protein structure prediction tool

Recent advances in sequence-based protein structure prediction

The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches