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Volume 230, Issue 2, 15 August 2024
Editorial Commentary
T-Cell Responses to Treponema pallidum Proteins in Blood and Skin to Advance Syphilis Vaccine Design: Learning From Nature
Viewpoint
Why is Parasite Sex Sexy?
Major Articles and Brief Reports
Bacterial Disease Pathogenesis
Treponema pallidum Periplasmic and Membrane Proteins Are Recognized by Circulating and Skin CD4+ T Cells
Little is known about the targets of effector T cells during human syphilis. Herein we show that Treponema pallidum infection elicits antigen-specific CD4+ T-cell responses in blood and skin that persist in both compartments long after curative therapy.
Seroreversion to Chlamydia trachomatis Pgp3 Antigen Among Children in a Hyperendemic Region of Amhara, Ethiopia
Role of Histiocyte-Derived frHMGB1 as a Facilitator in Noncanonical Pyroptosis of Monocytes/Macrophages in Lethal Sepsis
This study uncovers the pivotal role of noncanonical pyroptosis in lethal sepsis progression. Inhibiting pyroptosis alone improves the survival of septic mice. HMGB1 A box suppresses noncanonical pyroptosis, offering potential therapeutic strategies to ameliorate lethal sepsis.
The Engineered Lysin CF-370 Is Active Against Antibiotic-Resistant Gram-Negative Pathogens In Vitro and Synergizes With Meropenem in Experimental Pseudomonas aeruginosa Pneumonia
Engineered lysin CF-370, which demonstrated broad-spectrum in vitro activity against multiple clinically relevant gram-negative pathogens and in vivo efficacy in an animal model of invasive multisystem infection, showed therapeutic potential as systemic treatment for infections with antibiotic-resistant pathogens.
Changes in the Seroprevalence of Tick-Borne Rickettsia and Ehrlichia Among Soldiers—Fort Liberty, North Carolina, 1991–2019
Among soldiers stationed at Fort Liberty, North Carolina, between 1991 and 2019, the seroprevalence of tick-borne rickettsiosis decreased, while that of Ehrlichia nearly doubled, likely reflecting the geographic expansion of lone star tick populations.
Heparin-Binding Hemagglutinin of Mycobacterium tuberculosis Inhibits Autophagy via Toll-like Receptor 4 and Drives M2 Polarization in Macrophages
Heparin-binding hemagglutinin (HBHA) effectively inhibits macrophage autophagy and ultimately promotes the intracellular survival of Mycobacterium. The TLR4-dependent PI3K-AKT-mTOR signaling pathway is a crucial mediator of HBHA's inhibitory effects on autophagy. Additionally, HBHA plays a pivotal role in driving M2 polarization of macrophages.
Nuclear Factor κB Signaling Deficiency in CD11c-Expressing Phagocytes Mediates Early Inflammatory Responses and Enhances Mycobacterium tuberculosis Control
The study probes early immune responses to Mycobacterium tuberculosis, highlighting NF-κB signaling. The absence of IKK2 in CD11c+ myeloid cells enhances early M tuberculosis resistance, triggering proinflammatory responses. IKK2 abrogation in MRP8-expressing neutrophils has no impact on disease pathology or M tuberculosis control.
Nasal Delivery of Haemophilus haemolyticus Is Safe, Reduces Influenza Severity, and Prevents Development of Otitis Media in Mice
Nasal administration of the human commensal Haemophilus haemolyticus improved recovery from influenza and prevented development of nontypeable Haemophilus influenzae otitis media in mice. This represents an important finding as new therapies to prevent respiratory infections and otitis media are needed.
COVID-2019 Disease Pathogenesis
Patient and Immunological Factors Associated With Delayed Clearance of Mucosal Severe Acute Respiratory Syndrome Coronavirus 2 RNA and Symptom Persistence
Elevated body mass index is associated with mucosal viral persistence and prolonged symptoms after SARS-CoV-2 infection. Low serum anti-S IgG levels were associated with reinfection risk, and higher peak anti-S and anti-NC antibody levels were associated with persistent symptoms.
Comparative Diagnostic Utility of SARS-CoV-2 Rapid Antigen and Molecular Testing in a Community Setting
Overall sensitivity and specificity were 53.0% and 98.8%, respectively, but varied by clinical and temporal factors. Sensitivity increased 4–7 days after illness onset (70.1%) and when repeated ≥2 (68.5%) and ≥4 (75.8%) days after initial Ag-RDT negative, supporting serial testing recommendations.
Analysis of a Large Severe Acute Respiratory Syndrome Coronavirus 2 (Alpha) Outbreak in a Catalan Prison Using Conventional and Genomic Epidemiology
We investigated a SARS-CoV-2 outbreak affecting several modules of a penitentiary center, finding a single origin (B.1.1.7). Contact tracing identified plausible transmission vectors between modules, and prison lockdown most probably averted additional cases.
What Is the Economic Benefit of Annual COVID-19 Vaccination From the Adult Individual Perspective?
Our study shows that annual COVID-19 vaccination is net cost-saving from the adult individual perspective over the course of a year, and thus provides support for individuals to get the COVID-19 vaccine, even if they must pay out-of-pocket.
Characterization of Treatment Resistance and Viral Kinetics in the Setting of Single-Active Versus Dual-Active Monoclonal Antibodies Against Severe Acute Respiratory Syndrome Coronavirus 2
HIV/AIDs
Plasma Ribonuclease Activity in Antiretroviral Treatment–Naive People With Human Immunodeficiency Virus and Tuberculosis Disease
Diagnosis and Risk Factors of Prediabetes and Diabetes in People Living With Human Immunodeficiency Virus: Evaluation of Clinical and Microbiome Parameters
Prediabetes and diabetes are prevalent in people living with HIV. Glycated hemoglobin and fasting blood glucose are sufficient tests for screening. Risk factors include traditional causes such as age and body mass index, HIV-associated features including drug exposures and nadir CD4, and microbiome predictors.
Mitochondrial Haplogroups and Weight Gain After Initiating ART in Patients With HIV
We examined the association of mt-DNA haplogroups with weight/BMI gain 96 weeks after ART initiation in treatment-naive patients. A significant association was found between major UK mtDNA haplogroup and lower weight/BMI increase, highlighting mitochondrial genetics’ role in posttreatment weight dynamics.
Viral Disease Pathogenesis
Long-term Sudan Virus Ebola Survivors Maintain Multiple Antiviral Defense Mechanisms
Our study in naturally recovered long-term Sudan virus survivors revealed durable polyfunctional humoral and cellular memory immune responses with distinctive gene expression signatures, which may provide long-lasting protective immunity and help to define the ebolavirus correlate of protection.
Characterization of Humoral Responses to Nipah Virus Infection in the Syrian Hamster Model of Disease
Hamsters infected with NiV develop antibodies against the nucleoprotein and glycoprotein. While neutralizing antibodies do not develop until late in infection, early nonneutralizing antibodies possess Fc-mediated effector functions such as antibody-dependent complement deposition and antibody-dependent phagocytosis.
A Multiseason Randomized Controlled Trial of Advax-Adjuvanted Seasonal Influenza Vaccine in Participants With Chronic Disease or Older Age
This trial confirmed that an Advax-adjuvanted trivalent seasonal influenza vaccine was safe and well tolerated in high-risk individuals with chronic disease or older age, with positive impacts on their anti-influenza antibody responses.
Human Cytomegalovirus mRNA-1647 Vaccine Candidate Elicits Potent and Broad Neutralization and Higher Antibody-Dependent Cellular Cytotoxicity Responses Than the gB/MF59 Vaccine
The mRNA-1647 human cytomegalovirus vaccine elicited polyfunctional and durable antibody responses in humans. While the mRNA-1647–elicited glycoprotein B (gB)–specific IgG responses were lower than those of the moderately effective gB/MF59 vaccine, the pentameric complex–specific IgG responses were robust.
Respiratory Syncytial Virus Infects Peripheral and Spinal Nerves and Induces Chemokine-Mediated Neuropathy
This study provides evidence that respiratory syncytial virus, a common respiratory virus, causes neurotoxic infection of dorsal root ganglia peripheral nerves innervating the lungs and spinal cord and could cause release of replicating virus into the central nervous system, triggering monocyte infection, chemokine-induced neuroinflammation, and neurologic dysfunction.
Episodic Cost of Lower Respiratory Tract Illness due to Respiratory Syncytial Virus Among US Infants During the First Year of Life
Costs of lower respiratory tract illness due to respiratory syncytial virus are high in commercially insured and Medicaid-insured infants, especially among the youngest and those born prematurely.
Malaria
Microheterogeneity of Transmission Shapes Submicroscopic Malaria Carriage in Coastal Tanzania
In Bagamoyo, Tanzania, roughly two-thirds of asymptomatic malaria in >5 year-olds is submicroscopic, only detectable by polymerase chain reaction. Submicroscopic carriage and the proportion of submicroscopic carriers who later develop patent malaria are correlated with local village-level malaria prevalence.
Varied Prevalence of Antimalarial Drug Resistance Markers in Different Populations of Newly Arrived Refugees in Uganda
Ugandan refugees newly arrived from South Sudan and the Democratic Republic of Congo were frequently infected with malaria parasites, with prevalences of markers of drug resistance remarkably different depending on the refugee country of origin.
Reviews
Regulatory Considerations in the Approval of Rezafungin (Rezzayo) for the Treatment of Candidemia and Invasive Candidiasis in Adults
Rezafungin (Rezzayo) has been approved by the FDA to treat candidemia and invasive candidiasis in adults who have limited or no alternative treatment options. In this article, we describe the rationale for approval and important considerations during the review process.
Neutrophil Extracellular Traps: An Emerging Therapeutic Target to Improve Infectious Disease Outcomes
Neutrophil extracellular traps (NETs) aid in the clearance of pathogens, but their overproduction may drive massive inflammatory responses, contributing to morbidity and mortality. Despite the importance of NETs in the pathophysiology of infections, many clinicians are unaware of these processes.
Correspondence
Persons Deprived of Liberty in the Philippines: A Call to Health Equality
Reply to Antinori and Bausch-Jurken
Online-only Articles
Major Articles and Brief Reports
Bacterial Disease Pathogenesis
Antibody-Mediated Serum Resistance Protects Pseudomonas aeruginosa During Bloodstream Infections
Cloaking antibodies (cAbs) paradoxically protect bacteria from serum killing. Here we show that cAbs are prevalent in patients with Pseudomonas aeruginosa BSIs and allow survival of otherwise serum-sensitive bacteria. Generation of cAbs may increase susceptibility to bloodstream infections.
Ceftriaxone Efficacy for Mycobacterium avium Complex Lung Disease in the Hollow Fiber and Translation to Sustained Sputum Culture Conversion in Patients
Lung disease due to Mycobacterium avium complex shows response rates in only 40% of patients treated with the standard-of-care combination regimen. Ceftriaxone, an old drug, demonstrated better efficacy and is predicted to shorten therapy duration in patients 2.4-fold.
Oral β-Lactam Pairs for the Treatment of Mycobacterium avium Complex Pulmonary Disease
Oral β-lactam pairs combining tebipenem, sulopenem, or amoxicillin with cefuroxime achieve strong bactericidal activity at recommended doses against pulmonary disease caused by the Mycobacterium avium complex.
Combinatorial Host-Response Biomarker Signature (BV Score) and Its Subanalytes TRAIL, IP-10, and C-Reactive Protein in Children With Mycoplasma pneumoniae Community-Acquired Pneumonia
In this study on the host-response biomarker BV score and its subanalytes TRAIL, IP-10, and CRP, children with Mycoplasma pneumoniae community-acquired pneumonia have atypically low levels of the BV score, resembling a viral infection.
Detecting Residual Chronic Salmonella Typhi Carriers on the Road to Typhoid Elimination in Santiago, Chile, 2017–2019
Although autochthonous (non-travel-related) typhoid cases in Santiago, Chile, are currently rare compared to the 1977–1991 hyperendemic era, 5 of 16 recent cases (2017–2019) were linked to 4 elderly female chronic carriers by household investigations and whole genome sequencing of isolates.
The Ability of a 3-Gene Host Signature in Blood to Distinguish Tuberculous Meningitis From Other Brain Infections
Host immune signatures to diagnose tuberculosis show promise, but have not been investigated in tuberculous meningitis. We demonstrate the ability of a whole-blood 3-gene host signature to discriminate tuberculous meningitis from other brain infections, including individuals with HIV.
COVID-2019 Disease Pathogenesis
Interim Report of the Reactogenicity and Immunogenicity of Severe Acute Respiratory Syndrome Coronavirus 2 XBB–Containing Vaccines
XBB.1.5-containing messenger RNA-1273 vaccines administered as fifth doses to adults elicited potent and diverse neutralizing responses against Omicron XBB and other recent severe acute respiratory syndrome coronavirus 2 variants, supporting authorization and approval of monovalent XBB.1.5-containing vaccines for 2023-2024 immunizations.
Variant-Specific IgA Protects Against Omicron Infection
Higher variant-specific IgA, but not IgG, antibody response at 1 month after booster vaccination was associated with infection risk, where individuals, who remained uninfected over the follow-up period of at least 8 months, had higher variant-specific IgA than individuals who became infected.
Deciphering Factors Linked With Reduced Severe Acute Respiratory Syndrome Coronavirus 2 Susceptibility in the Swiss HIV Cohort Study
In our study of >6000 people with HIV, no HIV-specific factors were correlated with SARS-CoV-2 susceptibility. High prepandemic human coronavirus antibodies independently lowered SARS-CoV-2 risk, highlighting the importance of local immune factors in susceptibility.
Emergency Myelopoiesis Distinguishes Multisystem Inflammatory Syndrome in Children From Pediatric Severe Coronavirus Disease 2019
This article explores underlying mechanisms of the multisystem inflammatory syndrome in children (MIS-C) and provides novel insights into T-cell and myeloid cell fates contributing to MIS-C pathology.
Type I Interferon Autoantibodies Correlate With Cellular Immune Alterations in Severe COVID-19
This study shows that autoantibodies against type I interferon covary with cellular alterations, in particular reduced immune cell numbers, while they have limited effect on the soluble and adaptive immune response in critical COVID-19.
Viral Disease Pathogenesis
Identification of a Spike-Specific CD8+ T-Cell Epitope Following Vaccination Against the Middle East Respiratory Syndrome Coronavirus in Humans
This study reports for the first time the identification of a Middle East respiratory syndrome coronavirus (MERS-CoV) spike-specific CD8+ T-cell epitope in an HLA-A*03/HLA-B*35-positive individual following MVA-MERS-S vaccination. This contributes to the limited understanding of T-cell immunity against MERS-CoV.
Genome-wide Association Study of Susceptibility to Respiratory Syncytial Virus Hospitalization in Young Children <5 Years of age
We conducted a genome-wide association study (GWAS) to investigate the association between the severity of RSV infection and genetic markers. Despite this being the largest GWAS of severe RSV infection, we did not detect any genome-wide significant loci.
The Annual Economic Burden of Respiratory Syncytial Virus in Adults in the United States
RSV cases in US adults aged ≥60 years were estimated to contribute a total annual cost of $6.6 billion (95% uncertainty interval, $3.1–$12.9 billion), including $2.9 billion in direct costs and $3.7 billion in indirect costs.
Safety and Immunogenicity of Respiratory Syncytial Virus Prefusion Maternal Vaccine Coadministered With Diphtheria-Tetanus-Pertussis Vaccine: A Phase 2 Study
This respiratory syncytial virus (RSV) fusion protein stabilized in the prefusion conformation (RSVPreF3) vaccine was tolerable when coadministered with diphtheria, tetanus, and acellular pertussis vaccine (dTpa) in healthy nonpregnant women, and induced robust immune responses.
Epidemiology of Human Seasonal Coronaviruses Among People With Mild and Severe Acute Respiratory Illness in Blantyre, Malawi, 2011–2017
Human seasonal coronaviruses (HCoVs) were prevalent among children and adults with mild and severe acute respiratory illness (SARI) in Malawi between 2011 and 2017. 229E and OC43 were associated with SARI, and NL63 with influenza-like illness. Individual HCoVs had distinct seasonality.
Concomitant Administration of Ad26.RSV.preF/RSV preF Protein Vaccine and High-Dose Influenza Vaccine in Adults 65 Years and Older: A Noninferiority Trial
Respiratory syncytial virus (RSV) and influenza vaccines would ideally be coadministered in adults ≥65 years. Coadministration of an RSV vaccine candidate (Ad26.RSV.preF/RSV preF protein) and Fluzone-HD had an acceptable safety profile and did not hamper the immunogenicity of either vaccine.
Harnessing Endogenous Peptide Compounds as Potential Therapeutics for Severe Influenza
Oral Favipiravir Exposure and Pharmacodynamic Effects in Adult Outpatients With Acute Influenza
In influenza treatment, oral favipiravir failed to consistently reach target plasma concentrations and showed wide interindividual variability in concentrations associated with differences in favipiravir's metabolism and body weight. Higher oral doses and in seriously ill patients intravenous dosing require study.
Protein Dose-Sparing Effect of AS01B Adjuvant in a Randomized Preventive HIV Vaccine Trial of ALVAC-HIV (vCP2438) and Adjuvanted Bivalent Subtype C gp120
We report results of HIV vaccine trial HVTN 120, which evaluated ALVAC-HIV (vCP2438) boosted with MF59 or AS01B adjuvanted with gp120 at 2 doses. The highest CD4+ T-cell and binding antibody responses were in the lower dose gp120/AS01B regimen.
Varicella Zoster Virus Downregulates Expression of the Nonclassical Antigen Presentation Molecule CD1d
This study demonstrates the striking suppression of nonclassical antigen presentation molecule CD1d by varicella zoster virus (VZV). In identifying a novel VZV immunoevasive strategy, we also demonstrate preliminary investigations in the mechanisms underpinning the VZV-mediated downregulation of CD1d.
Persistent Low-Level Variants in a Subset of Viral Genes Are Highly Predictive of Poor Outcome in Immunocompromised Patients With Cytomegalovirus Infection
In this study, we explore the complex relationship between cytomegalovirus infections and clinical outcomes in transplant recipients and propose strategies for monitoring viral dynamics to optimize treatment and prevent failure to respond to antiviral therapies.
Torque Teno Virus Load Is Associated With Centers for Disease Control and Prevention Stage and CD4+ Cell Count in People Living With Human Immunodeficiency Virus but Seems Unrelated to AIDS-Defining Events and Human Pegivirus Load
Torque teno virus (TTV) load relates to CD4+ T-cell count and human pegivirus load in treatment-naive HIV patients and shows a strong property as a biomarker for immunodeficiency (CDC stages 1–3) but not for human pegivirus load or AIDS-defining events.
Global Health
A Bedaquiline, Pyrazinamide, Levofloxacin, Linezolid, and Clofazimine Second-line Regimen for Tuberculosis Displays Similar Early Bactericidal Activity as the Standard Rifampin-Based First-line Regimen
This study reports that the early bactericidal activity of a bedaquiline-based second-line regimen for drug-resistant tuberculosis (TB) is similar to that of the standard rifampin-based first-line regimen for drug-sensitive TB.
Review of Current Tuberculosis Human Infection Studies for Use in Accelerating Tuberculosis Vaccine Development: A Meeting Report
Wellcome Trust and the International AIDS Vaccine Initiative convened international experts developing tuberculosis human infection studies to discuss the status of each model and the key enablers to progress these, with a focus around accelerating their use for testing tuberculosis vaccines.
Rhabdomyolysis, Acute Kidney Injury, and Mortality in Ebola Virus Disease: Retrospective Analysis of Cases From the Eastern Democratic Republic of the Congo, 2019
In this retrospective of 333 patients with Ebola virus disease (Democratic Republic of the Congo, 2019), rhabdomyolysis at admission was an independent predictor of acute kidney injury (adjusted odds ratio, 2.2 [95% CI, 1.2–3.8]; P = .0065) and mortality (adjusted hazard ratio, 1.7 [95% CI, 1.03–2.9]; P = .037).
Parasites
Host Transcriptional Meta-signatures Reveal Diagnostic Biomarkers for Plasmodium falciparum Malaria
We performed integrative analyses of multiple cohorts spanning >1500 transcriptome samples to uncover gene signatures that discriminate malaria from healthy controls, enteric fever, and sepsis or that distinguish cerebral malaria from other clinical phenotypes.
Could Less Be More? Accounting for Fractional-Dose Regimens and Different Number of Vaccine Doses When Measuring the Impact of the RTS,S/AS01E Malaria Vaccine
Full- and fractional-dose regimens of the RTS,S/AS01E malaria vaccine have similar vaccine efficacy against clinical malaria. With a fixed supply of vaccine, more children can be vaccinated and thus more cases prevented by using fractional- rather than full-dose regimens.
Review
The Novavax Heterologous Coronavirus Disease 2019 Booster Demonstrates Lower Reactogenicity Than Messenger RNA: A Targeted Review
Clinical and real-world evidence studies suggest that mRNA-based boosters induce increased reactogenicity compared with the Novavax protein-based COVID-19 vaccine, NVX-CoV2373. Pain/tenderness, swelling, fatigue, headache, muscle pain, and fever are less common for NVX-CoV2373 versus mRNA boosters.