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Authors: Tanja Woyke
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Journal Article

Thermophilic Dehalococcoidia with unusual traits shed light on an unexpected past

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Marike Palmer and others
The ISME Journal, Volume 17, Issue 7, July 2023, Pages 952–966, https://doi.org/10.1038/s41396-023-01405-0
Published: 11 April 2023
Journal Article

Dissecting the dominant hot spring microbial populations based on community-wide sampling at single-cell genomic resolution

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Robert M Bowers and others
The ISME Journal, Volume 16, Issue 5, May 2022, Pages 1337–1347, https://doi.org/10.1038/s41396-021-01178-4
Published: 30 December 2021
Journal Article

Insights into the dynamics between viruses and their hosts in a hot spring microbial mat

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Jessica K Jarett and others
The ISME Journal, Volume 14, Issue 10, October 2020, Pages 2527–2541, https://doi.org/10.1038/s41396-020-0705-4
Published: 13 July 2020
Journal Article

Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria

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Alexander J Probst and others
The ISME Journal, Volume 14, Issue 6, June 2020, Pages 1547–1560, https://doi.org/10.1038/s41396-020-0624-4
Published: 13 March 2020
Journal Article

Niche differentiation is spatially and temporally regulated in the rhizosphere

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Erin E Nuccio and others
The ISME Journal, Volume 14, Issue 4, April 2020, Pages 999–1014, https://doi.org/10.1038/s41396-019-0582-x
Published: 17 January 2020
Journal Article

Novel copper-containing membrane monooxygenases (CuMMOs) encoded by alkane-utilizing Betaproteobacteria

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Fauziah F Rochman and others
The ISME Journal, Volume 14, Issue 3, March 2020, Pages 714–726, https://doi.org/10.1038/s41396-019-0561-2
Published: 03 December 2019
Journal Article

Function-driven single-cell genomics uncovers cellulose-degrading bacteria from the rare biosphere

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Devin F R Doud and others
The ISME Journal, Volume 14, Issue 3, March 2020, Pages 659–675, https://doi.org/10.1038/s41396-019-0557-y
Published: 21 November 2019
Journal Article

Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution

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Minglei Ren and others
The ISME Journal, Volume 13, Issue 9, September 2019, Pages 2150–2161, https://doi.org/10.1038/s41396-019-0418-8
Published: 25 April 2019
Journal Article

Carboxydotrophy potential of uncultivated Hydrothermarchaeota from the subseafloor crustal biosphere

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Stephanie A Carr and others
The ISME Journal, Volume 13, Issue 6, June 2019, Pages 1457–1468, https://doi.org/10.1038/s41396-019-0352-9
Published: 07 February 2019
Journal Article

Single cell genomic and transcriptomic evidence for the use of alternative nitrogen substrates by anammox bacteria

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Sangita Ganesh and others
The ISME Journal, Volume 12, Issue 11, November 2018, Pages 2706–2722, https://doi.org/10.1038/s41396-018-0223-9
Published: 10 July 2018
Journal Article

Contrasting patterns of genome-level diversity across distinct co-occurring bacterial populations

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Sarahi L Garcia and others
The ISME Journal, Volume 12, Issue 3, March 2018, Pages 742–755, https://doi.org/10.1038/s41396-017-0001-0
Published: 08 December 2017
Journal Article

Metabolic versatility of small archaea Micrarchaeota and Parvarchaeota

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Lin-Xing Chen and others
The ISME Journal, Volume 12, Issue 3, March 2018, Pages 756–775, https://doi.org/10.1038/s41396-017-0002-z
Published: 08 December 2017
Journal Article

Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant–cyanobacteria symbiosis

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Denis Warshan and others
The ISME Journal, Volume 11, Issue 12, December 2017, Pages 2821–2833, https://doi.org/10.1038/ismej.2017.134
Published: 11 August 2017
Journal Article

Capturing the genetic makeup of the active microbiome in situ

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Esther Singer and others
The ISME Journal, Volume 11, Issue 9, September 2017, Pages 1949–1963, https://doi.org/10.1038/ismej.2017.59
Published: 02 June 2017
Journal Article

Genomic composition and dynamics among Methanomicrobiales predict adaptation to contrasting environments

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Patrick Browne and others
The ISME Journal, Volume 11, Issue 1, January 2017, Pages 87–99, https://doi.org/10.1038/ismej.2016.104
Published: 23 August 2016
Journal Article

High-resolution phylogenetic microbial community profiling

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Esther Singer and others
The ISME Journal, Volume 10, Issue 8, August 2016, Pages 2020–2032, https://doi.org/10.1038/ismej.2015.249
Published: 09 February 2016
Journal Article

Tuning fresh: radiation through rewiring of central metabolism in streamlined bacteria

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Alexander Eiler and others
The ISME Journal, Volume 10, Issue 8, August 2016, Pages 1902–1914, https://doi.org/10.1038/ismej.2015.260
Published: 19 January 2016
Journal Article

Phylogeny and physiology of candidate phylum ‘Atribacteria’ (OP9/JS1) inferred from cultivation-independent genomics

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Masaru K Nobu and others
The ISME Journal, Volume 10, Issue 2, February 2016, Pages 273–286, https://doi.org/10.1038/ismej.2015.97
Published: 19 June 2015
Journal Article

ProDeGe: a computational protocol for fully automated decontamination of genomes

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Kristin Tennessen and others
The ISME Journal, Volume 10, Issue 1, January 2016, Pages 269–272, https://doi.org/10.1038/ismej.2015.100
Published: 09 June 2015
Journal Article

Single-cell genomics-based analysis of virus–host interactions in marine surface bacterioplankton

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Jessica M Labonté and others
The ISME Journal, Volume 9, Issue 11, November 2015, Pages 2386–2399, https://doi.org/10.1038/ismej.2015.48
Published: 07 April 2015