Volume 22, Issue 3, June 2024

Computational Strategies and Algorithms for Inferring Cellular Composition of Spatial Transcriptomics Data

• Abstract
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• Supplementary data

Review and Evaluate the Bioinformatics Analysis Strategies of ATAC-seq and CUT&Tag Data

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• Supplementary data

Evaluating Performance of Different RNA Secondary Structure Prediction Programs Using Self-cleaving Ribozymes

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• Supplementary data

MethylGenotyper: Accurate Estimation of SNP Genotypes and Genetic Relatedness from DNA Methylation Data

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• Supplementary data

BLUPmrMLM: A Fast mrMLM Algorithm in Genome-wide Association Studies

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• Supplementary data

Inter3D: Capture of TAD Reorganization Endows Variant Patterns of Gene Transcription

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MSIsensor-RNA: Microsatellite Instability Detection for Bulk and Single-cell Gene Expression Data

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SuperFeat: Quantitative Feature Learning from Single-cell RNA-seq Data Facilitates Drug Repurposing

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• Supplementary data

GenBase: A Nucleotide Sequence Database

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SMARTdb: An Integrated Database for Exploring Single-cell Multi-omics Data of Reproductive Medicine

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• Supplementary data

SCancerRNA: Expression at the Single-cell Level and Interaction Resource of Non-coding RNA Biomarkers for Cancers

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• Supplementary data

AVM: A Manually Curated Database of Aerosol-transmitted Virus Mutations, Human Diseases, and Drugs

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• Supplementary data

Nphos: Database and Predictor of Protein N-phosphorylation

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CBioProfiler: A Web and Standalone Pipeline for Cancer Biomarker and Subtype Characterization

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• Supplementary data