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Volume 9, Issue 11, 1 November 2019
Genome Reports
Updated Genome Assembly and Annotation for Metrosideros polymorpha, an Emerging Model Tree Species of Ecological Divergence
Ayako Izuno and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3513–3520, https://doi.org/10.1534/g3.119.400643
Genome Improvement and Genetic Map Construction for Aethionema arabicum, the First Divergent Branch in the Brassicaceae Family
Thu-Phuong Nguyen and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3521–3530, https://doi.org/10.1534/g3.119.400657
De Novo Assembly and Annotation from Parental and F1 Puma Genomes of the Florida Panther Genetic Restoration Program
Alexander Ochoa and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3531–3536, https://doi.org/10.1534/g3.119.400629
Construction of High-Resolution RAD-Seq Based Linkage Map, Anchoring Reference Genome, and QTL Mapping of the Sex Chromosome in the Marine Medaka Oryzias melastigma
Bo-Young Lee and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3537–3545, https://doi.org/10.1534/g3.119.400708
Phased Diploid Genome Assemblies for Three Strains of Candida albicans from Oak Trees
Jennafer A P Hamlin and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3547–3554, https://doi.org/10.1534/g3.119.400486
Mutant Screen Reports
Pharmaco-Genetic Screen To Uncover Actin Regulators Targeted by Prostaglandins During Drosophila Oogenesis
Andrew J Spracklen and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3555–3565, https://doi.org/10.1534/g3.119.400704
A Screen of the Conserved Kinome for Negative Regulators of LIN-12 Negative Regulatory Region (“NRR”)-Missense Activity in Caenorhabditis elegans
Yuting Deng and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3567–3574, https://doi.org/10.1534/g3.119.400471
Software and Data Resources
A Deep Learning Approach for Detecting Copy Number Variation in Next-Generation Sequencing Data
Tom Hill and Robert L Unckless
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3575–3582, https://doi.org/10.1534/g3.119.400596
Investigations
Multiple Functions of the Essential Gene PpV in Drosophila Early Development
Boyang Liu and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3583–3593, https://doi.org/10.1534/g3.119.400662
Multiple Changes Underlie Allelic Divergence of CUP2 Between Saccharomyces Species
Xueying C Li and Justin C Fay
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3595–3600, https://doi.org/10.1534/g3.119.400616
Identification of Quantitative Trait Loci for Component Traits of Flowering Capacity Across Temperature in Petunia
QiuXia C Chen and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3601–3610, https://doi.org/10.1534/g3.119.400653
Excess Light Priming in Arabidopsis thaliana Genotypes with Altered DNA Methylomes
Diep R Ganguly and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3611–3621, https://doi.org/10.1534/g3.119.400659
Regulation of Drosophila Intestinal Stem Cell Proliferation by Enterocyte Mitochondrial Pyruvate Metabolism
Dona R Wisidagama and Carl S Thummel
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3623–3630, https://doi.org/10.1534/g3.119.400633
Partner Choice in Spontaneous Mitotic Recombination in Wild Type and Homologous Recombination Mutants of Candida albicans
Alberto Bellido and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3631–3644, https://doi.org/10.1534/g3.119.400516
Genome-Wide Off-Target Analysis in CRISPR-Cas9 Modified Mice and Their Offspring
Yan Dong and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3645–3651, https://doi.org/10.1534/g3.119.400503
Regulation of the Neurospora Circadian Clock by the Spliceosome Component PRP5
Huan Ma and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3653–3661, https://doi.org/10.1534/g3.119.400500
Genome-Wide Variant Identification and High-Density Genetic Map Construction Using RADseq for Platycladus orientalis (Cupressaceae)
Yuqing Jin and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3663–3672, https://doi.org/10.1534/g3.119.400684
Dynamic Patterns of Transcript Abundance of Transposable Element Families in Maize
Sarah N Anderson and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3673–3682, https://doi.org/10.1534/g3.119.400431
Elucidating the Molecular Determinants of Aβ Aggregation with Deep Mutational Scanning
Vanessa E Gray and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3683–3689, https://doi.org/10.1534/g3.119.400535
Benchmarking Parametric and Machine Learning Models for Genomic Prediction of Complex Traits
Christina B Azodi and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3691–3702, https://doi.org/10.1534/g3.119.400498
Activity-Dependent Regulation of the Proapoptotic BH3-Only Gene egl-1 in a Living Neuron Pair in Caenorhabditis elegans
Jesse Cohn and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3703–3714, https://doi.org/10.1534/g3.119.400654
Three Quantitative Trait Loci Explain More than 60% of Variation for Chill Coma Recovery Time in a Natural Population of Drosophila ananassae
Annabella Königer and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3715–3725, https://doi.org/10.1534/g3.119.400453
Pitfalls and Remedies for Cross Validation with Multi-trait Genomic Prediction Methods
Daniel Runcie and Hao Cheng
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3727–3741, https://doi.org/10.1534/g3.119.400598
Comparison and Characterization of Mutations Induced by Gamma-Ray and Carbon-Ion Irradiation in Rice (Oryza sativa L.) Using Whole-Genome Resequencing
Feng Li and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3743–3751, https://doi.org/10.1534/g3.119.400555
Molecular Profiling of the Drosophila Antenna Reveals Conserved Genes Underlying Olfaction in Insects
Pratyajit Mohapatra and Karen Menuz
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3753–3771, https://doi.org/10.1534/g3.119.400669
Chromosome Preference During Homologous Recombination Repair of DNA Double-Strand Breaks in Drosophila melanogaster
Joel Fernandez and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3773–3780, https://doi.org/10.1534/g3.119.400607
Transgenic Analyses in Drosophila Reveal That mCORL1 Is Functionally Distinct from mCORL2 and dCORL
Michael J Stinchfield and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3781–3789, https://doi.org/10.1534/g3.119.400647
Expression-Based Cell Lineage Analysis in Drosophila Through a Course-Based Research Experience for Early Undergraduates
John M Olson and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3791–3800, https://doi.org/10.1534/g3.119.400541
Genetic Dissection Reveals the Role of Ash1 Domains in Counteracting Polycomb Repression
Eshagh Dorafshan and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3801–3812, https://doi.org/10.1534/g3.119.400579
Limits to Genomic Divergence Under Sexually Antagonistic Selection
Katja R Kasimatis and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3813–3824, https://doi.org/10.1534/g3.119.400711
Visualization and Quantification of Transposon Activity in Caenorhabditis elegans RNAi Pathway Mutants
Dylan C Wallis and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3825–3832, https://doi.org/10.1534/g3.119.400639
Single-Step Genome-Wide Association Study for Resistance to Piscirickettsia salmonis in Rainbow Trout (Oncorhynchus mykiss)
Agustin Barria and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3833–3841, https://doi.org/10.1534/g3.119.400204
Genome-Wide Analysis of Cell Cycle-Regulating Genes in the Symbiotic Dinoflagellate Breviolum minutum
Michael L Cato and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3843–3853, https://doi.org/10.1534/g3.119.400363
Efficient Estimation of Marker Effects in Plant Breeding
Alencar Xavier
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3855–3866, https://doi.org/10.1534/g3.119.400728
Mapping of the Sex Determining Region on Linkage Group 12 of Guppy (Poecilia reticulata)
Lior Dor and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3867–3875, https://doi.org/10.1534/g3.119.400656
Unpredictable Effects of the Genetic Background of Transgenic Lines in Physiological Quantitative Traits
Amalia Evangelou and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3877–3890, https://doi.org/10.1534/g3.119.400715
A Mouse Mutation That Dysregulates Neighboring Galnt17 and Auts2 Genes Is Associated with Phenotypes Related to the Human AUTS2 Syndrome
P Anne Weisner and others
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Pages 3891–3906, https://doi.org/10.1534/g3.119.400723
Corrigendum
Corrigendum
G3 Genes|Genomes|Genetics, Volume 9, Issue 11, 1 November 2019, Page 3907, https://doi.org/10.1534/g3.119.400709
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