Volume 12, Issue 3
March 2022
Cover image
Cover image
A larval parasitoid wasp, Dinocampus coccinellae (Hymenoptera: Braconidae) emerges from a parasitized host seven-spotted lady beetle (Coccinella septempunctata, Coleoptera: Coccinellidae). The larva will thereon proceed to pupate in a cocoon under the host beetle, immobilizing it, prior to emergence as an adult female. Reproduction proceeds via thelytokous parthenogenesis, with unfertilized eggs developing into adult diploid daughters. See Sethuraman et al., https://doi.org/10.1093/g3journal/jkac001.
Image Credit: Roxane Saisho, Sethuraman Lab (www.arunsethuraman.weebly.com)
EISSN 2160-1836
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Volume 12, Issue 3, March 2022
Genome Report
Genome sequence of the English grain aphid, Sitobion avenae and its endosymbiont Buchnera aphidicola
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab418, https://doi.org/10.1093/g3journal/jkab418
Chromosome-level genome assembly of the fully mycoheterotrophic orchid Gastrodia elata
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab433, https://doi.org/10.1093/g3journal/jkab433
Genome assembly of Danaus chrysippus and comparison with the Monarch Danaus plexippus
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab449, https://doi.org/10.1093/g3journal/jkab449
Genome of the parasitoid wasp Dinocampus coccinellae reveals extensive duplications, accelerated evolution, and independent origins of thelytokous parthenogeny and solitary behavior
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac001, https://doi.org/10.1093/g3journal/jkac001
Mutant Screen Report
A sensitized genetic screen to identify regulators of Caenorhabditis elegans germline stem cells
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab439, https://doi.org/10.1093/g3journal/jkab439
Investigation
Modeling allelic diversity of multiparent mapping populations affects detection of quantitative trait loci
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac011, https://doi.org/10.1093/g3journal/jkac011
Analysis of genotype-by-environment interactions in a maize mapping population
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac013, https://doi.org/10.1093/g3journal/jkac013
Long-read isoform sequencing reveals tissue-specific isoform expression between active and hibernating brown bears (Ursus arctos)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab422, https://doi.org/10.1093/g3journal/jkab422
Combining genetic resources and elite material populations to improve the accuracy of genomic prediction in apple
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab420, https://doi.org/10.1093/g3journal/jkab420
Selection for seed size has uneven effects on specialized metabolite abundance in oat (Avena sativa L.)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab419, https://doi.org/10.1093/g3journal/jkab419
ZNF146/OZF and ZNF507 target LINE-1 sequences
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac002, https://doi.org/10.1093/g3journal/jkac002
Effects of abolishing Whi2 on the proteome and nitrogen catabolite repression-sensitive protein production
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab432, https://doi.org/10.1093/g3journal/jkab432
Distinct mechanoreceptor pezo-1 isoforms modulate food intake in the nematode Caenorhabditis elegans
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab429, https://doi.org/10.1093/g3journal/jkab429
Genome-wide association study of disease resilience traits from a natural polymicrobial disease challenge model in pigs identifies the importance of the major histocompatibility complex region
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab441, https://doi.org/10.1093/g3journal/jkab441
Nonadditive gene expression is correlated with nonadditive phenotypic expression in interspecific triploid hybrids of willow (Salix spp.)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab436, https://doi.org/10.1093/g3journal/jkab436
Comparative transcriptome analysis of genes and metabolic pathways involved in sporulation in Ganoderma lingzhi
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab448, https://doi.org/10.1093/g3journal/jkab448
Shutdown corner, a large deletion mutant isolated from a haploid mutagenesis screen in zebrafish
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab442, https://doi.org/10.1093/g3journal/jkab442
A B73×Palomero Toluqueño mapping population reveals local adaptation in Mexican highland maize
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab447, https://doi.org/10.1093/g3journal/jkab447
Unraveling the potential of phenomic selection within and among diverse breeding material of maize (Zea mays L.)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab445, https://doi.org/10.1093/g3journal/jkab445
Ankfn1-mutant vestibular defects require loss of both ancestral and derived paralogs for penetrance in zebrafish
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab446, https://doi.org/10.1093/g3journal/jkab446
Simulation of sugar kelp (Saccharina latissima) breeding guided by practices to accelerate genetic gains
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac003, https://doi.org/10.1093/g3journal/jkac003
The evolution of larger size in high-altitude Drosophila melanogaster has a variable genetic architecture
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab454, https://doi.org/10.1093/g3journal/jkab454
Formation and function of dauer ascarosides in the nematodes Caenorhabditis briggsae and Caenorhabditis elegans
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac014, https://doi.org/10.1093/g3journal/jkac014
A conditional glutamatergic synaptic vesicle marker for Drosophila
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkab453, https://doi.org/10.1093/g3journal/jkab453
The development and characterization of a conditional, epitope-tagged glutamatergic synaptic vesicle for the Drosophila model system is reported. The conditional glutamatergic synaptic vesicle marker, smFLAG-vGlut, is demonstrated to be conditionally expressible, specifically expressed in glutamatergic neurons, and subcellularly localized to glutamatergic synaptic vesicles. Additionally, the utility of smFLAG-vGlut is demonstrated by glutamatergic neurotransmitter phenotyping of 26 different neuron types of the central complex of which nine were determined to be glutamatergic.
Simultaneous dissection of grain carotenoid levels and kernel color in biparental maize populations with yellow-to-orange grain
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac006, https://doi.org/10.1093/g3journal/jkac006
Predicting the genomic resolution of bulk segregant analysis
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac012, https://doi.org/10.1093/g3journal/jkac012
Transgenic Drosophila lines for LexA-dependent gene and growth regulation
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac018, https://doi.org/10.1093/g3journal/jkac018
The role of the epidermis enhancer element in positive and negative transcriptional regulation of ebony in Drosophila melanogaster
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac010, https://doi.org/10.1093/g3journal/jkac010
Phenolic degradation by catechol dioxygenases is associated with pathogenic fungi with a necrotrophic lifestyle in the Ceratocystidaceae
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac008, https://doi.org/10.1093/g3journal/jkac008
Genomic prediction of growth in a commercially, recreationally, and culturally important marine resource, the Australian snapper (Chrysophrys auratus)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac015, https://doi.org/10.1093/g3journal/jkac015
Unraveling the complex genetic basis of growth in New Zealand silver trevally (Pseudocaranx georgianus)
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac016, https://doi.org/10.1093/g3journal/jkac016
Caenorhabditis elegans transposable elements harbor diverse transcription factor DNA-binding sites
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac009, https://doi.org/10.1093/g3journal/jkac009
A deep learning framework for characterization of genotype data
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac020, https://doi.org/10.1093/g3journal/jkac020
High accuracy of genome-enabled prediction of belowground and physiological traits in barley seedlings
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac022, https://doi.org/10.1093/g3journal/jkac022
Chlamydomonas CHT7 is involved in repressing DNA replication and mitotic genes during synchronous growth
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac023, https://doi.org/10.1093/g3journal/jkac023
Pool-GWAS on reproductive dormancy in Drosophila simulans suggests a polygenic architecture
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac027, https://doi.org/10.1093/g3journal/jkac027
Corrections
Correction to: Identification of pathways modulating vemurafenib resistance in melanoma cells via a genome-wide CRISPR/Cas9 screen
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac024, https://doi.org/10.1093/g3journal/jkac024
Correction to: Highly effective proximate labeling in Drosophila
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac005, https://doi.org/10.1093/g3journal/jkac005
Corrigendum to “Stage-specific disruption of X chromosome expression during spermatogenesis in sterile house mouse hybrids”
G3 Genes|Genomes|Genetics, Volume 12, Issue 3, March 2022, jkac007, https://doi.org/10.1093/g3journal/jkac007
