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Authors: Yann Ponty
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Journal Article

CParty: hierarchically constrained partition function of RNA pseudoknots

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Mateo Gray and others
Bioinformatics, Volume 41, Issue 1, January 2025, btae748, https://doi.org/10.1093/bioinformatics/btae748
Published: 19 December 2024
Journal Article

ISMB 2024 Proceedings

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Tijana Milenković and Yann Ponty
Bioinformatics, Volume 40, Issue Supplement_1, July 2024, Pages i1–i2, https://doi.org/10.1093/bioinformatics/btae286
Published: 28 June 2024
Journal Article

ISMB/ECCB 2023 proceedings

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Yann Ponty and Sushmita Roy
Bioinformatics, Volume 39, Issue Supplement_1, June 2023, Pages i1–i2, https://doi.org/10.1093/bioinformatics/btad319
Published: 30 June 2023
Journal Article

RNAxplorer: harnessing the power of guiding potentials to sample RNA landscapes

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Gregor Entzian and others
Bioinformatics, Volume 37, Issue 15, August 2021, Pages 2126–2133, https://doi.org/10.1093/bioinformatics/btab066
Published: 04 February 2021
Journal Article

incaRNAfbinv 2.0: a webserver and software with motif control for fragment-based design of RNAs

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Matan Drory Retwitzer and others
Bioinformatics, Volume 36, Issue 9, May 2020, Pages 2920–2922, https://doi.org/10.1093/bioinformatics/btaa039
Published: 23 January 2020
Journal Article

Efficient approximations of RNA kinetics landscape using non-redundant sampling

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Juraj Michálik and others
Bioinformatics, Volume 33, Issue 14, July 2017, Pages i283–i292, https://doi.org/10.1093/bioinformatics/btx269
Published: 12 July 2017
Journal Article

ecceTERA: comprehensive gene tree-species tree reconciliation using parsimony

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Edwin Jacox and others
Bioinformatics, Volume 32, Issue 13, July 2016, Pages 2056–2058, https://doi.org/10.1093/bioinformatics/btw105
Published: 26 February 2016
Journal Article

A weighted sampling algorithm for the design of RNA sequences with targeted secondary structure and nucleotide distribution

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Vladimir Reinharz and others
Bioinformatics, Volume 29, Issue 13, July 2013, Pages i308–i315, https://doi.org/10.1093/bioinformatics/btt217
Published: 19 June 2013
Journal Article

VARNA: Interactive drawing and editing of the RNA secondary structure

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Kévin Darty and others
Bioinformatics, Volume 25, Issue 15, August 2009, Pages 1974–1975, https://doi.org/10.1093/bioinformatics/btp250
Published: 27 April 2009
Journal Article

GenRGenS: software for generating random genomic sequences and structures

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Yann Ponty and others
Bioinformatics, Volume 22, Issue 12, June 2006, Pages 1534–1535, https://doi.org/10.1093/bioinformatics/btl113
Published: 30 March 2006