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Volume 28, Issue 11, June 2012
Detection of differentially expressed segments in tiling array data
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1471–1479, https://doi.org/10.1093/bioinformatics/bts142
Large-scale analysis of conserved rare codon clusters suggests an involvement in co-translational molecular recognition events
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1438–1445, https://doi.org/10.1093/bioinformatics/bts149
DeOri: a database of eukaryotic DNA replication origins
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1551–1552, https://doi.org/10.1093/bioinformatics/bts151
Bayesian integration of networks without gold standards
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1495–1500, https://doi.org/10.1093/bioinformatics/bts154
LOESS correction for length variation in gene set-based genomic sequence analysis
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1446–1454, https://doi.org/10.1093/bioinformatics/bts155
State and parameter estimation of the heat shock response system using Kalman and particle filters
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1501–1507, https://doi.org/10.1093/bioinformatics/bts161
A de novo metagenomic assembly program for shotgun DNA reads
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1455–1462, https://doi.org/10.1093/bioinformatics/bts162
Rigorous assessment of gene set enrichment tests
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1480–1486, https://doi.org/10.1093/bioinformatics/bts164
Eoulsan: a cloud computing-based framework facilitating high throughput sequencing analyses
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1542–1543, https://doi.org/10.1093/bioinformatics/bts165
Approximate probabilistic analysis of biopathway dynamics
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1508–1516, https://doi.org/10.1093/bioinformatics/bts166
Bpipe: a tool for running and managing bioinformatics pipelines
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1525–1526, https://doi.org/10.1093/bioinformatics/bts167
PaGeFinder: quantitative identification of spatiotemporal pattern genes
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1544–1545, https://doi.org/10.1093/bioinformatics/bts169
Differential variability improves the identification of cancer risk markers in DNA methylation studies profiling precursor cancer lesions
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1487–1494, https://doi.org/10.1093/bioinformatics/bts170
CRNreals: a toolbox for distinguishability and identifiability analysis of biochemical reaction networks
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1549–1550, https://doi.org/10.1093/bioinformatics/bts171
Flexible-meccano: a tool for the generation of explicit ensemble descriptions of intrinsically disordered proteins and their associated experimental observables
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1463–1470, https://doi.org/10.1093/bioinformatics/bts172
Large-scale compression of genomic sequence databases with the Burrows–Wheeler transform
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1415–1419, https://doi.org/10.1093/bioinformatics/bts173
IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1420–1428, https://doi.org/10.1093/bioinformatics/bts174
GRASS: a generic algorithm for scaffolding next-generation sequencing assemblies
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1429–1437, https://doi.org/10.1093/bioinformatics/bts175
GeneclusterViz: a tool for conserved gene cluster visualization, exploration and analysis
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1527–1529, https://doi.org/10.1093/bioinformatics/bts177
A comprehensive computational model of facilitated diffusion in prokaryotes
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1517–1524, https://doi.org/10.1093/bioinformatics/bts178
CheShift-2: graphic validation of protein structures
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1538–1539, https://doi.org/10.1093/bioinformatics/bts179
ape 3.0: New tools for distance-based phylogenetics and evolutionary analysis in R
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1536–1537, https://doi.org/10.1093/bioinformatics/bts184
e-Drug3D: 3D structure collections dedicated to drug repurposing and fragment-based drug design
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1540–1541, https://doi.org/10.1093/bioinformatics/bts186
pIRS: Profile-based Illumina pair-end reads simulator
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1533–1535, https://doi.org/10.1093/bioinformatics/bts187
NanoStringNorm: an extensible R package for the pre-processing of NanoString mRNA and miRNA data
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1546–1548, https://doi.org/10.1093/bioinformatics/bts188
GLOGS: a fast and powerful method for GWAS of binary traits with risk covariates in related populations
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1553–1554, https://doi.org/10.1093/bioinformatics/bts190
RNA-SeQC: RNA-seq metrics for quality control and process optimization
Bioinformatics, Volume 28, Issue 11, June 2012, Pages 1530–1532, https://doi.org/10.1093/bioinformatics/bts196
