Fig. 4
 Endogenous levels of cytokinins, gibberellin, ABA and auxins in a wild-type and gibberellin signaling mutants. Shoots of the wild type (T65) and gid1-3, gid2-1 and slr1 were harvested after growth in a greenhouse for 5 weeks. The amounts of the hormones are shown as histograms with the SD (n = 3). The y-axis is concentration as pmol g−1 FW. Hormone species and other compounds in gray were not measured, and those in black were under the quantification limit. The overall recoveries of analyzed stable isotope-labeled internal standards are presented in Supplementary Table S7. Genes involved in each metabolic process are indicated in italic blue letters surrounded by a rectangle. The details of each metabolic pathway are described by Hirano et al. (2008). GA44/15-OL, GA44/15-open lactone; XHT, xanthoxin; IpyA, indole-3-pyruvic acid; NHT, N-hydroxyl-tryptamine; IAN, indole-3-acetonitrile; IPT, adenosine phosphate-isopentenyltransferase; CKX, OsCKX; CPS, ent-copalyl diphosphate synthase; KS, ent-kaurene synthase; KO, ent-kaurene oxidase; KAO, ent-kaurenoic acid oxidase; EUIL, EUI-like; ZEP, OsZEP; NCED, OsNCED; AAO, OsAAO; ASA, OsASA; ASB, OsASB; TAA, OsTAA; YUCCA, OsYUCCA; NIT, OsNIT.

 Endogenous levels of cytokinins, gibberellin, ABA and auxins in a wild-type and gibberellin signaling mutants. Shoots of the wild type (T65) and gid1-3, gid2-1 and slr1 were harvested after growth in a greenhouse for 5 weeks. The amounts of the hormones are shown as histograms with the SD (n = 3). The y-axis is concentration as pmol g1 FW. Hormone species and other compounds in gray were not measured, and those in black were under the quantification limit. The overall recoveries of analyzed stable isotope-labeled internal standards are presented in Supplementary Table S7. Genes involved in each metabolic process are indicated in italic blue letters surrounded by a rectangle. The details of each metabolic pathway are described by Hirano et al. (2008). GA44/15-OL, GA44/15-open lactone; XHT, xanthoxin; IpyA, indole-3-pyruvic acid; NHT, N-hydroxyl-tryptamine; IAN, indole-3-acetonitrile; IPT, adenosine phosphate-isopentenyltransferase; CKX, OsCKX; CPS, ent-copalyl diphosphate synthase; KS, ent-kaurene synthase; KO, ent-kaurene oxidase; KAO, ent-kaurenoic acid oxidase; EUIL, EUI-like; ZEP, OsZEP; NCED, OsNCED; AAO, OsAAO; ASA, OsASA; ASB, OsASB; TAA, OsTAA; YUCCA, OsYUCCA; NIT, OsNIT.

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