Fig. 6.
Colocalization and evolution of retroCNVs in humans. a) Density plots showing the distribution of colocalization frequency between chromatin pairs under different null models for singleton retroCNVs (left panel) and high-frequency retroCNVs (right panel). The arrows point to the colocalization frequency between true retroCNVs and their parental genes. Simulations and true frequencies are based on Hi-C data in GM12878. P-values are indicated for simulation 5. b) The presence frequency spectra for retroCNVs that are colocalized in 0, 1, and ≥2 cell lines.

Colocalization and evolution of retroCNVs in humans. a) Density plots showing the distribution of colocalization frequency between chromatin pairs under different null models for singleton retroCNVs (left panel) and high-frequency retroCNVs (right panel). The arrows point to the colocalization frequency between true retroCNVs and their parental genes. Simulations and true frequencies are based on Hi-C data in GM12878. P-values are indicated for simulation 5. b) The presence frequency spectra for retroCNVs that are colocalized in 0, 1, and ≥2 cell lines.

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