Figure 5.
A snapshot of several lines in the SRR7807492_TransBorrow.gtf file that stored the assembled transcripts. The file includes the name of the chromosome, the source of the annotation (TransBorrow), the type of the annotation (“transcript” or “exon”), the start and end positions of the annotation; the score or confidence level of the annotation (usually 1000), the direction of the strand of the annotation (with “+” representing the positive strand, “-” representing the negative strand, and “.” indicating no strand information), gene_id (the index of a gene), transcript_id (the index of a transcript), exon_number (the index of exons), cov (estimated coverage), and transcripts Per Million (TPM).

A snapshot of several lines in the SRR7807492_TransBorrow.gtf file that stored the assembled transcripts. The file includes the name of the chromosome, the source of the annotation (TransBorrow), the type of the annotation (“transcript” or “exon”), the start and end positions of the annotation; the score or confidence level of the annotation (usually 1000), the direction of the strand of the annotation (with “+” representing the positive strand, “-” representing the negative strand, and “.” indicating no strand information), gene_id (the index of a gene), transcript_id (the index of a transcript), exon_number (the index of exons), cov (estimated coverage), and transcripts Per Million (TPM).

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