Phylogenetic affiliation of sequenced DGGE bands and their best matches in the GenBank
| DGGE band | Phylogenetic affiliation | Isolation environments of best matches in the GenBank | Identity (%) |
| Repressed by nutrient addition | |||
| 1 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from ballast water or incubation enriched by coral mucus | 98 |
| 2 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 3 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 4 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 5 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 6 | Gammaproteobacteria (unclassified) | Environmental clones from eutrophic Victoria Harbor or incubation enriched by DMS | 98 |
| 7 | Gammaproteobacteria (unclassified) | Environmental clones from various coastal environments including eutrophic Victoria Harbor | 99 |
| Stimulated by nutrient addition | |||
| 8 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| 9 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| DGGE band | Phylogenetic affiliation | Isolation environments of best matches in the GenBank | Identity (%) |
| Repressed by nutrient addition | |||
| 1 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from ballast water or incubation enriched by coral mucus | 98 |
| 2 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 3 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 4 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 5 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 6 | Gammaproteobacteria (unclassified) | Environmental clones from eutrophic Victoria Harbor or incubation enriched by DMS | 98 |
| 7 | Gammaproteobacteria (unclassified) | Environmental clones from various coastal environments including eutrophic Victoria Harbor | 99 |
| Stimulated by nutrient addition | |||
| 8 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| 9 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
Refer to Fig. 4 for the position of DGGE bands.
Phylogenetic affiliation of sequenced DGGE bands and their best matches in the GenBank
| DGGE band | Phylogenetic affiliation | Isolation environments of best matches in the GenBank | Identity (%) |
| Repressed by nutrient addition | |||
| 1 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from ballast water or incubation enriched by coral mucus | 98 |
| 2 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 3 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 4 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 5 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 6 | Gammaproteobacteria (unclassified) | Environmental clones from eutrophic Victoria Harbor or incubation enriched by DMS | 98 |
| 7 | Gammaproteobacteria (unclassified) | Environmental clones from various coastal environments including eutrophic Victoria Harbor | 99 |
| Stimulated by nutrient addition | |||
| 8 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| 9 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| DGGE band | Phylogenetic affiliation | Isolation environments of best matches in the GenBank | Identity (%) |
| Repressed by nutrient addition | |||
| 1 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from ballast water or incubation enriched by coral mucus | 98 |
| 2 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 3 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 4 | Gammaproteobacteria (family Alteromonadaceae) | Environmental clones from eutrophic Victoria Harbor or coral near fish farm effluent | 98 |
| 5 | Alphaproteobacteria (genus Roseovarius) | Environmental clones from various coastal environments | 98 |
| 6 | Gammaproteobacteria (unclassified) | Environmental clones from eutrophic Victoria Harbor or incubation enriched by DMS | 98 |
| 7 | Gammaproteobacteria (unclassified) | Environmental clones from various coastal environments including eutrophic Victoria Harbor | 99 |
| Stimulated by nutrient addition | |||
| 8 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
| 9 | Gammaproteobacteria (genus Vibrio) | Symbiotic Vibrio clones from various marine organisms | 99 |
Refer to Fig. 4 for the position of DGGE bands.
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