1

List of polyhydroxyalkanoate-producing (positive in PCR and microscopy) bacteria isolated from sugar beet, oilseed rape and wheat

BOX groupIsolate no.MicroenvironmentClosest database match (EMBL no.)% Homology
CR1-4Rhizosphere oilseed rapePseudomonas brassicacearum (FN313510)99
IR1-8Rhizosphere oilseed rapePseudomonas extremaustralis (FN313511)99
KW3-4Rhizosphere wheatPseudomonas sp. (FN313512)100
FW4-3Rhizosphere wheatPseudomonas orientalis (FN313513)99
CW4-5Rhizosphere wheatPseudomonas sp. (FN313514)100
JW4-7Rhizosphere wheatSinorhizobium sp. (FN313515)100
EZR1-4Rhizosphere sugar beetPseudomonas sp. (FN313516)99
CZR1-5Rhizosphere sugar beetVariovorax sp. (FN313517)100
FZR 1-10Rhizosphere sugar beetPseudomonas sp. (FN313518)100
LZR 1-17Rhizosphere sugar beetLysobacter gummosus (FN313519)99
DZR2-4Rhizosphere sugar beetEnsifer sp. (FN313520)100
BZR2-12Rhizosphere sugar beetBurkholderia terricola (FN313521)100
GZR2-15Rhizosphere sugar beetPseudomonas putida (FN313522)100
DZR2-16Rhizosphere sugar beetPseudomonas sp. (FN313523)98
DZR3-7Rhizosphere sugar beetPseudomonas sp. (FN313524)98
HZR3-10Rhizosphere sugar beetPseudomonas sp. (FN313525)99
AZR3-12Rhizosphere sugar beetPseudomonas sp. (FN313526)100
CZR4-11Rhizosphere sugar beetPseudomonas sp. (FN313527)98
MLV2-2-10Rhizosphere sugar beetPseudomonas fluorescens (AJ969079)87
NR1-2-4Rhizosphere sugar beetPseudomonas sp. (FN313528)100
OSel1-2-6Rhizosphere sugar beetPseudomonas sp. (FN313529)99
PAt1-1-2Rhizosphere sugar beetPseudomonas sp. (FN313530)100
QPhst2-1-6Rhizosphere sugar beetPseudomonas sp. (FN313531)99
RAt2-2-11Rhizosphere sugar beetPseudomonas sp. (FN313532)99
SSDK1-2-10Rhizosphere sugar beetPseudomonas sp. (FN313533)99
SSDK1-2-16Rhizosphere sugar beetPseudomonas sp. (FN313534)100
TSDK1-2-18Rhizosphere sugar beetPantoea sp. (FN313535)99
USDK2-2-6Rhizosphere sugar beetPseudomonas sp. (AJ969083)100
VSDK2-2-8Rhizosphere sugar beetPseudomonas sp. (FN313536)100
XRE 1-3-41Rhizosphere sugar beetErwinia rhapontici (FN313537)99
BOX groupIsolate no.MicroenvironmentClosest database match (EMBL no.)% Homology
CR1-4Rhizosphere oilseed rapePseudomonas brassicacearum (FN313510)99
IR1-8Rhizosphere oilseed rapePseudomonas extremaustralis (FN313511)99
KW3-4Rhizosphere wheatPseudomonas sp. (FN313512)100
FW4-3Rhizosphere wheatPseudomonas orientalis (FN313513)99
CW4-5Rhizosphere wheatPseudomonas sp. (FN313514)100
JW4-7Rhizosphere wheatSinorhizobium sp. (FN313515)100
EZR1-4Rhizosphere sugar beetPseudomonas sp. (FN313516)99
CZR1-5Rhizosphere sugar beetVariovorax sp. (FN313517)100
FZR 1-10Rhizosphere sugar beetPseudomonas sp. (FN313518)100
LZR 1-17Rhizosphere sugar beetLysobacter gummosus (FN313519)99
DZR2-4Rhizosphere sugar beetEnsifer sp. (FN313520)100
BZR2-12Rhizosphere sugar beetBurkholderia terricola (FN313521)100
GZR2-15Rhizosphere sugar beetPseudomonas putida (FN313522)100
DZR2-16Rhizosphere sugar beetPseudomonas sp. (FN313523)98
DZR3-7Rhizosphere sugar beetPseudomonas sp. (FN313524)98
HZR3-10Rhizosphere sugar beetPseudomonas sp. (FN313525)99
AZR3-12Rhizosphere sugar beetPseudomonas sp. (FN313526)100
CZR4-11Rhizosphere sugar beetPseudomonas sp. (FN313527)98
MLV2-2-10Rhizosphere sugar beetPseudomonas fluorescens (AJ969079)87
NR1-2-4Rhizosphere sugar beetPseudomonas sp. (FN313528)100
OSel1-2-6Rhizosphere sugar beetPseudomonas sp. (FN313529)99
PAt1-1-2Rhizosphere sugar beetPseudomonas sp. (FN313530)100
QPhst2-1-6Rhizosphere sugar beetPseudomonas sp. (FN313531)99
RAt2-2-11Rhizosphere sugar beetPseudomonas sp. (FN313532)99
SSDK1-2-10Rhizosphere sugar beetPseudomonas sp. (FN313533)99
SSDK1-2-16Rhizosphere sugar beetPseudomonas sp. (FN313534)100
TSDK1-2-18Rhizosphere sugar beetPantoea sp. (FN313535)99
USDK2-2-6Rhizosphere sugar beetPseudomonas sp. (AJ969083)100
VSDK2-2-8Rhizosphere sugar beetPseudomonas sp. (FN313536)100
XRE 1-3-41Rhizosphere sugar beetErwinia rhapontici (FN313537)99

Arabic numerals represent the plots (1–4) and the strain number (1–16).

Letters represent the location or microhabitat: R, oilseed rape (Deggendorf, Germany); W, wheat (Deggendorf, Germany); ZR, sugar beet (Deggendorf, Germany); Sel, Seligenstadt, Germany (ZR); At, Attily, France (ZR); Phst, Hilprechtshausen, Germany (ZR); SDK Schoondijke, the Netherlands (ZR); LV, LaVeuve, France (ZR).

1

List of polyhydroxyalkanoate-producing (positive in PCR and microscopy) bacteria isolated from sugar beet, oilseed rape and wheat

BOX groupIsolate no.MicroenvironmentClosest database match (EMBL no.)% Homology
CR1-4Rhizosphere oilseed rapePseudomonas brassicacearum (FN313510)99
IR1-8Rhizosphere oilseed rapePseudomonas extremaustralis (FN313511)99
KW3-4Rhizosphere wheatPseudomonas sp. (FN313512)100
FW4-3Rhizosphere wheatPseudomonas orientalis (FN313513)99
CW4-5Rhizosphere wheatPseudomonas sp. (FN313514)100
JW4-7Rhizosphere wheatSinorhizobium sp. (FN313515)100
EZR1-4Rhizosphere sugar beetPseudomonas sp. (FN313516)99
CZR1-5Rhizosphere sugar beetVariovorax sp. (FN313517)100
FZR 1-10Rhizosphere sugar beetPseudomonas sp. (FN313518)100
LZR 1-17Rhizosphere sugar beetLysobacter gummosus (FN313519)99
DZR2-4Rhizosphere sugar beetEnsifer sp. (FN313520)100
BZR2-12Rhizosphere sugar beetBurkholderia terricola (FN313521)100
GZR2-15Rhizosphere sugar beetPseudomonas putida (FN313522)100
DZR2-16Rhizosphere sugar beetPseudomonas sp. (FN313523)98
DZR3-7Rhizosphere sugar beetPseudomonas sp. (FN313524)98
HZR3-10Rhizosphere sugar beetPseudomonas sp. (FN313525)99
AZR3-12Rhizosphere sugar beetPseudomonas sp. (FN313526)100
CZR4-11Rhizosphere sugar beetPseudomonas sp. (FN313527)98
MLV2-2-10Rhizosphere sugar beetPseudomonas fluorescens (AJ969079)87
NR1-2-4Rhizosphere sugar beetPseudomonas sp. (FN313528)100
OSel1-2-6Rhizosphere sugar beetPseudomonas sp. (FN313529)99
PAt1-1-2Rhizosphere sugar beetPseudomonas sp. (FN313530)100
QPhst2-1-6Rhizosphere sugar beetPseudomonas sp. (FN313531)99
RAt2-2-11Rhizosphere sugar beetPseudomonas sp. (FN313532)99
SSDK1-2-10Rhizosphere sugar beetPseudomonas sp. (FN313533)99
SSDK1-2-16Rhizosphere sugar beetPseudomonas sp. (FN313534)100
TSDK1-2-18Rhizosphere sugar beetPantoea sp. (FN313535)99
USDK2-2-6Rhizosphere sugar beetPseudomonas sp. (AJ969083)100
VSDK2-2-8Rhizosphere sugar beetPseudomonas sp. (FN313536)100
XRE 1-3-41Rhizosphere sugar beetErwinia rhapontici (FN313537)99
BOX groupIsolate no.MicroenvironmentClosest database match (EMBL no.)% Homology
CR1-4Rhizosphere oilseed rapePseudomonas brassicacearum (FN313510)99
IR1-8Rhizosphere oilseed rapePseudomonas extremaustralis (FN313511)99
KW3-4Rhizosphere wheatPseudomonas sp. (FN313512)100
FW4-3Rhizosphere wheatPseudomonas orientalis (FN313513)99
CW4-5Rhizosphere wheatPseudomonas sp. (FN313514)100
JW4-7Rhizosphere wheatSinorhizobium sp. (FN313515)100
EZR1-4Rhizosphere sugar beetPseudomonas sp. (FN313516)99
CZR1-5Rhizosphere sugar beetVariovorax sp. (FN313517)100
FZR 1-10Rhizosphere sugar beetPseudomonas sp. (FN313518)100
LZR 1-17Rhizosphere sugar beetLysobacter gummosus (FN313519)99
DZR2-4Rhizosphere sugar beetEnsifer sp. (FN313520)100
BZR2-12Rhizosphere sugar beetBurkholderia terricola (FN313521)100
GZR2-15Rhizosphere sugar beetPseudomonas putida (FN313522)100
DZR2-16Rhizosphere sugar beetPseudomonas sp. (FN313523)98
DZR3-7Rhizosphere sugar beetPseudomonas sp. (FN313524)98
HZR3-10Rhizosphere sugar beetPseudomonas sp. (FN313525)99
AZR3-12Rhizosphere sugar beetPseudomonas sp. (FN313526)100
CZR4-11Rhizosphere sugar beetPseudomonas sp. (FN313527)98
MLV2-2-10Rhizosphere sugar beetPseudomonas fluorescens (AJ969079)87
NR1-2-4Rhizosphere sugar beetPseudomonas sp. (FN313528)100
OSel1-2-6Rhizosphere sugar beetPseudomonas sp. (FN313529)99
PAt1-1-2Rhizosphere sugar beetPseudomonas sp. (FN313530)100
QPhst2-1-6Rhizosphere sugar beetPseudomonas sp. (FN313531)99
RAt2-2-11Rhizosphere sugar beetPseudomonas sp. (FN313532)99
SSDK1-2-10Rhizosphere sugar beetPseudomonas sp. (FN313533)99
SSDK1-2-16Rhizosphere sugar beetPseudomonas sp. (FN313534)100
TSDK1-2-18Rhizosphere sugar beetPantoea sp. (FN313535)99
USDK2-2-6Rhizosphere sugar beetPseudomonas sp. (AJ969083)100
VSDK2-2-8Rhizosphere sugar beetPseudomonas sp. (FN313536)100
XRE 1-3-41Rhizosphere sugar beetErwinia rhapontici (FN313537)99

Arabic numerals represent the plots (1–4) and the strain number (1–16).

Letters represent the location or microhabitat: R, oilseed rape (Deggendorf, Germany); W, wheat (Deggendorf, Germany); ZR, sugar beet (Deggendorf, Germany); Sel, Seligenstadt, Germany (ZR); At, Attily, France (ZR); Phst, Hilprechtshausen, Germany (ZR); SDK Schoondijke, the Netherlands (ZR); LV, LaVeuve, France (ZR).

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