Table 1.
Dissociation constants (Kd) and apparent Michaelis constants (KM) for Hrq1 and RecQ4
Hrq1RecQ4
SubstrateBinding Kd (nM)Unwinding KM (nM)Binding Kd (nM)Unwinding KM (nM)
Poly(dT) ssDNA13.45 ± 0.19N/A2.38 ± 0.15N/A
Random ForkN/D113.9 ± 19.5107.7 ± 32.514.7 ± 1.1
3΄ tail140.7 ± 59.4111.4 ± 43.421.8 ± 4.298.1 ± 17.8
5΄ tail154.5 ± 44.6-101.6 ± 29.4-
Blunt dsDNA----
Bubble36.1 ± 4.923.6 ± 2.216.8 ± 2.3143 ± 56.1
HJ79.2 ± 22.7-90.1 ± 23.4-
D-loop9.9 ± 0.71.6 ± 0.112.6 ± 1.85.7 ± 0.8
G417.6 ± 2.214.1 ± 0.912.3 ± 2.538.4 ± 8.7
Poly(dT) Fork6.5 ± 0.512.6 ± 1.750.9 ± 10.421.7 ± 1.1
Yeast Tel Fork3.5 ± 0.42.0 ± 0.218.5 ± 3.19.2 ± 1.6
Human Tel Fork15.7 ± 1.723.0 ± 1.539.7 ± 8.335.4 ± 5.4
Hrq1RecQ4
SubstrateBinding Kd (nM)Unwinding KM (nM)Binding Kd (nM)Unwinding KM (nM)
Poly(dT) ssDNA13.45 ± 0.19N/A2.38 ± 0.15N/A
Random ForkN/D113.9 ± 19.5107.7 ± 32.514.7 ± 1.1
3΄ tail140.7 ± 59.4111.4 ± 43.421.8 ± 4.298.1 ± 17.8
5΄ tail154.5 ± 44.6-101.6 ± 29.4-
Blunt dsDNA----
Bubble36.1 ± 4.923.6 ± 2.216.8 ± 2.3143 ± 56.1
HJ79.2 ± 22.7-90.1 ± 23.4-
D-loop9.9 ± 0.71.6 ± 0.112.6 ± 1.85.7 ± 0.8
G417.6 ± 2.214.1 ± 0.912.3 ± 2.538.4 ± 8.7
Poly(dT) Fork6.5 ± 0.512.6 ± 1.750.9 ± 10.421.7 ± 1.1
Yeast Tel Fork3.5 ± 0.42.0 ± 0.218.5 ± 3.19.2 ± 1.6
Human Tel Fork15.7 ± 1.723.0 ± 1.539.7 ± 8.335.4 ± 5.4

1Abbreviations used: ssDNA, single-stranded DNA; N/D, not determined; N/A, not applicable; dsDNA, double-stranded DNA; HJ, Holliday junction; G4, G-quadruplex; and Tel, telomere repeat sequence.

Table 1.
Dissociation constants (Kd) and apparent Michaelis constants (KM) for Hrq1 and RecQ4
Hrq1RecQ4
SubstrateBinding Kd (nM)Unwinding KM (nM)Binding Kd (nM)Unwinding KM (nM)
Poly(dT) ssDNA13.45 ± 0.19N/A2.38 ± 0.15N/A
Random ForkN/D113.9 ± 19.5107.7 ± 32.514.7 ± 1.1
3΄ tail140.7 ± 59.4111.4 ± 43.421.8 ± 4.298.1 ± 17.8
5΄ tail154.5 ± 44.6-101.6 ± 29.4-
Blunt dsDNA----
Bubble36.1 ± 4.923.6 ± 2.216.8 ± 2.3143 ± 56.1
HJ79.2 ± 22.7-90.1 ± 23.4-
D-loop9.9 ± 0.71.6 ± 0.112.6 ± 1.85.7 ± 0.8
G417.6 ± 2.214.1 ± 0.912.3 ± 2.538.4 ± 8.7
Poly(dT) Fork6.5 ± 0.512.6 ± 1.750.9 ± 10.421.7 ± 1.1
Yeast Tel Fork3.5 ± 0.42.0 ± 0.218.5 ± 3.19.2 ± 1.6
Human Tel Fork15.7 ± 1.723.0 ± 1.539.7 ± 8.335.4 ± 5.4
Hrq1RecQ4
SubstrateBinding Kd (nM)Unwinding KM (nM)Binding Kd (nM)Unwinding KM (nM)
Poly(dT) ssDNA13.45 ± 0.19N/A2.38 ± 0.15N/A
Random ForkN/D113.9 ± 19.5107.7 ± 32.514.7 ± 1.1
3΄ tail140.7 ± 59.4111.4 ± 43.421.8 ± 4.298.1 ± 17.8
5΄ tail154.5 ± 44.6-101.6 ± 29.4-
Blunt dsDNA----
Bubble36.1 ± 4.923.6 ± 2.216.8 ± 2.3143 ± 56.1
HJ79.2 ± 22.7-90.1 ± 23.4-
D-loop9.9 ± 0.71.6 ± 0.112.6 ± 1.85.7 ± 0.8
G417.6 ± 2.214.1 ± 0.912.3 ± 2.538.4 ± 8.7
Poly(dT) Fork6.5 ± 0.512.6 ± 1.750.9 ± 10.421.7 ± 1.1
Yeast Tel Fork3.5 ± 0.42.0 ± 0.218.5 ± 3.19.2 ± 1.6
Human Tel Fork15.7 ± 1.723.0 ± 1.539.7 ± 8.335.4 ± 5.4

1Abbreviations used: ssDNA, single-stranded DNA; N/D, not determined; N/A, not applicable; dsDNA, double-stranded DNA; HJ, Holliday junction; G4, G-quadruplex; and Tel, telomere repeat sequence.

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