Database name | Taxon | Wild/ inbred/ landrace | Mutants | Plasmid/ vector/ clones | Map (Physical or Linkage) | Gene (mutated genes/all genes) | Phenotype | SNPs | Blast service | Images | External DB (collaborating DB)[reference] | Featured contents/ services | |
1 | NBRP-Macaque | Vertebrata-mammalia-primate | o | o | |||||||||
2 | NBRP-Mouse(Riken BRC) | Vertebrata-mammalia- murinae-mus | o | o | o | P | M | o | o | o | o | MGI[3], (IMSR, JMSR;http://www.shigen.nig.ac.jp/mouse/jmsr/) | |
3 | NBRP-Rat | Mammalia-murinae-rattus | o | o | o | P | M | o | o | o | o | RGD[4], (JMSR) | graphical display of the phenotype data |
4 | NBRP-Xenopus | Vertebrata-amphibia | o | o | o | ||||||||
5 | NBRP-Zebrafish | Vertebrata-actinopterygii-cypriniformes-danio | o | M | o | o | ZFIN[5] | ||||||
6 | NBRP-Medaka | Vertebrata-actinopterygii-beloniformes-oryzias | o | o | o | P | M | o | o | o | atlas, phylogenetic tree | ||
7 | NBRP-Ciona | Ascidiacea-ciona | o | o | M | o | o | (Ghost,[6] CIPRO;http://cipro.ibio.jp/new/) | |||||
8 | NBRP-Drosophila (DGRC) | Arthropoda-insecta-diptera-drosophilidae | o | o | o | P | A | o | o | o | o | FlyBase[7] | |
9 | NBRP-Silkworm (SilkwormBase) | Arthropoda-insecta-lepidoptera-bombyx | o | L | M | o | o | laeva period time | |||||
10 | NBRP-C. elegans | Pseudocoelomata-nematoda | o | M | Wormbase[8] | ||||||||
11 | NBRP-Rice (Oryzabase) | Viridiplantae-poaceae-oryzeae | o | o | P,L | A | o | o | o | Gramene[9], IRRI; http://beta.irri.org/index.php/Home/Welcome/Frontpage.html | developmental stage | ||
12 | NBRP-Barley | Viridiplantae-poaceae-triticeae-hordeum | o | o | L | o | o | o | phenotype data | ||||
13 | NBRP-Wheat (KOMUGI) | Viridiplantae-poaceae-triticeae | o | o | o | L | A | o | o | o | (TriFLDB[10]) | gene catalogue | |
14 | NBRP-Arabidopsis (Riken BRC) | Viridiplantae-brassicales-arabidopsis | o | o | o | o | o | ||||||
15 | NBRP-Chrysanthemum | Viridiplantae-asterids-chrysanthemum | o | o | o | ||||||||
16 | NBRP-Morning glory | Viridiplantae-solanales-ipomoeeae | o | o | L | M | o | o | |||||
17 | NBRP-Lotus/Glycine (LegumeBase) | Fabales-fabaceae | o | o | o | L | M | o | o | (miyakogusa.jp[11], Soybean Full-length cDNA database[12]) | |||
18 | NBRP-Tomato | Viridiplantae-solanales-lycopersicon | o | (KafTom;http://www.pgb.kazusa.or.jp/kaftom/, MiBASE[13]) | |||||||||
19 | NBRP-Algae | 14 phyla (eukaryota and bacteria) | o | o | o | photograph, phylogenetic tree | |||||||
20 | NBRP-Yeast | Fungi-ascomycota | o | o | P | A | SGD[14], geneDB[15] | ||||||
21 | NBRP-Cellular slime mold | Mycetozoa-dictyostelliida | o | dictyBase[16] | |||||||||
22 | NBRP-Prokaryote E. coli | Bacteria-proteobacteria | o | o | P | A | o | PEC[17], EcoGene[18], EcoCyc[19], COG[20], NCBI[1], SwissProt[21], GTOP[22], KEGG[23], InterPro[24] | |||||
23 | NBRP-Prokaryote B. subtilis | Bacteria-firmicutes-bacilli-bacillaceae | o | M | |||||||||
24 | NBRP-Pathogenic microbes | Bacteria and protozoa | o | o | o | ||||||||
25 | NBRP-General microbes (Riken BRC, JCM) | Bacteria | o |
Database name | Taxon | Wild/ inbred/ landrace | Mutants | Plasmid/ vector/ clones | Map (Physical or Linkage) | Gene (mutated genes/all genes) | Phenotype | SNPs | Blast service | Images | External DB (collaborating DB)[reference] | Featured contents/ services | |
1 | NBRP-Macaque | Vertebrata-mammalia-primate | o | o | |||||||||
2 | NBRP-Mouse(Riken BRC) | Vertebrata-mammalia- murinae-mus | o | o | o | P | M | o | o | o | o | MGI[3], (IMSR, JMSR;http://www.shigen.nig.ac.jp/mouse/jmsr/) | |
3 | NBRP-Rat | Mammalia-murinae-rattus | o | o | o | P | M | o | o | o | o | RGD[4], (JMSR) | graphical display of the phenotype data |
4 | NBRP-Xenopus | Vertebrata-amphibia | o | o | o | ||||||||
5 | NBRP-Zebrafish | Vertebrata-actinopterygii-cypriniformes-danio | o | M | o | o | ZFIN[5] | ||||||
6 | NBRP-Medaka | Vertebrata-actinopterygii-beloniformes-oryzias | o | o | o | P | M | o | o | o | atlas, phylogenetic tree | ||
7 | NBRP-Ciona | Ascidiacea-ciona | o | o | M | o | o | (Ghost,[6] CIPRO;http://cipro.ibio.jp/new/) | |||||
8 | NBRP-Drosophila (DGRC) | Arthropoda-insecta-diptera-drosophilidae | o | o | o | P | A | o | o | o | o | FlyBase[7] | |
9 | NBRP-Silkworm (SilkwormBase) | Arthropoda-insecta-lepidoptera-bombyx | o | L | M | o | o | laeva period time | |||||
10 | NBRP-C. elegans | Pseudocoelomata-nematoda | o | M | Wormbase[8] | ||||||||
11 | NBRP-Rice (Oryzabase) | Viridiplantae-poaceae-oryzeae | o | o | P,L | A | o | o | o | Gramene[9], IRRI; http://beta.irri.org/index.php/Home/Welcome/Frontpage.html | developmental stage | ||
12 | NBRP-Barley | Viridiplantae-poaceae-triticeae-hordeum | o | o | L | o | o | o | phenotype data | ||||
13 | NBRP-Wheat (KOMUGI) | Viridiplantae-poaceae-triticeae | o | o | o | L | A | o | o | o | (TriFLDB[10]) | gene catalogue | |
14 | NBRP-Arabidopsis (Riken BRC) | Viridiplantae-brassicales-arabidopsis | o | o | o | o | o | ||||||
15 | NBRP-Chrysanthemum | Viridiplantae-asterids-chrysanthemum | o | o | o | ||||||||
16 | NBRP-Morning glory | Viridiplantae-solanales-ipomoeeae | o | o | L | M | o | o | |||||
17 | NBRP-Lotus/Glycine (LegumeBase) | Fabales-fabaceae | o | o | o | L | M | o | o | (miyakogusa.jp[11], Soybean Full-length cDNA database[12]) | |||
18 | NBRP-Tomato | Viridiplantae-solanales-lycopersicon | o | (KafTom;http://www.pgb.kazusa.or.jp/kaftom/, MiBASE[13]) | |||||||||
19 | NBRP-Algae | 14 phyla (eukaryota and bacteria) | o | o | o | photograph, phylogenetic tree | |||||||
20 | NBRP-Yeast | Fungi-ascomycota | o | o | P | A | SGD[14], geneDB[15] | ||||||
21 | NBRP-Cellular slime mold | Mycetozoa-dictyostelliida | o | dictyBase[16] | |||||||||
22 | NBRP-Prokaryote E. coli | Bacteria-proteobacteria | o | o | P | A | o | PEC[17], EcoGene[18], EcoCyc[19], COG[20], NCBI[1], SwissProt[21], GTOP[22], KEGG[23], InterPro[24] | |||||
23 | NBRP-Prokaryote B. subtilis | Bacteria-firmicutes-bacilli-bacillaceae | o | M | |||||||||
24 | NBRP-Pathogenic microbes | Bacteria and protozoa | o | o | o | ||||||||
25 | NBRP-General microbes (Riken BRC, JCM) | Bacteria | o |
Database name | Taxon | Wild/ inbred/ landrace | Mutants | Plasmid/ vector/ clones | Map (Physical or Linkage) | Gene (mutated genes/all genes) | Phenotype | SNPs | Blast service | Images | External DB (collaborating DB)[reference] | Featured contents/ services | |
1 | NBRP-Macaque | Vertebrata-mammalia-primate | o | o | |||||||||
2 | NBRP-Mouse(Riken BRC) | Vertebrata-mammalia- murinae-mus | o | o | o | P | M | o | o | o | o | MGI[3], (IMSR, JMSR;http://www.shigen.nig.ac.jp/mouse/jmsr/) | |
3 | NBRP-Rat | Mammalia-murinae-rattus | o | o | o | P | M | o | o | o | o | RGD[4], (JMSR) | graphical display of the phenotype data |
4 | NBRP-Xenopus | Vertebrata-amphibia | o | o | o | ||||||||
5 | NBRP-Zebrafish | Vertebrata-actinopterygii-cypriniformes-danio | o | M | o | o | ZFIN[5] | ||||||
6 | NBRP-Medaka | Vertebrata-actinopterygii-beloniformes-oryzias | o | o | o | P | M | o | o | o | atlas, phylogenetic tree | ||
7 | NBRP-Ciona | Ascidiacea-ciona | o | o | M | o | o | (Ghost,[6] CIPRO;http://cipro.ibio.jp/new/) | |||||
8 | NBRP-Drosophila (DGRC) | Arthropoda-insecta-diptera-drosophilidae | o | o | o | P | A | o | o | o | o | FlyBase[7] | |
9 | NBRP-Silkworm (SilkwormBase) | Arthropoda-insecta-lepidoptera-bombyx | o | L | M | o | o | laeva period time | |||||
10 | NBRP-C. elegans | Pseudocoelomata-nematoda | o | M | Wormbase[8] | ||||||||
11 | NBRP-Rice (Oryzabase) | Viridiplantae-poaceae-oryzeae | o | o | P,L | A | o | o | o | Gramene[9], IRRI; http://beta.irri.org/index.php/Home/Welcome/Frontpage.html | developmental stage | ||
12 | NBRP-Barley | Viridiplantae-poaceae-triticeae-hordeum | o | o | L | o | o | o | phenotype data | ||||
13 | NBRP-Wheat (KOMUGI) | Viridiplantae-poaceae-triticeae | o | o | o | L | A | o | o | o | (TriFLDB[10]) | gene catalogue | |
14 | NBRP-Arabidopsis (Riken BRC) | Viridiplantae-brassicales-arabidopsis | o | o | o | o | o | ||||||
15 | NBRP-Chrysanthemum | Viridiplantae-asterids-chrysanthemum | o | o | o | ||||||||
16 | NBRP-Morning glory | Viridiplantae-solanales-ipomoeeae | o | o | L | M | o | o | |||||
17 | NBRP-Lotus/Glycine (LegumeBase) | Fabales-fabaceae | o | o | o | L | M | o | o | (miyakogusa.jp[11], Soybean Full-length cDNA database[12]) | |||
18 | NBRP-Tomato | Viridiplantae-solanales-lycopersicon | o | (KafTom;http://www.pgb.kazusa.or.jp/kaftom/, MiBASE[13]) | |||||||||
19 | NBRP-Algae | 14 phyla (eukaryota and bacteria) | o | o | o | photograph, phylogenetic tree | |||||||
20 | NBRP-Yeast | Fungi-ascomycota | o | o | P | A | SGD[14], geneDB[15] | ||||||
21 | NBRP-Cellular slime mold | Mycetozoa-dictyostelliida | o | dictyBase[16] | |||||||||
22 | NBRP-Prokaryote E. coli | Bacteria-proteobacteria | o | o | P | A | o | PEC[17], EcoGene[18], EcoCyc[19], COG[20], NCBI[1], SwissProt[21], GTOP[22], KEGG[23], InterPro[24] | |||||
23 | NBRP-Prokaryote B. subtilis | Bacteria-firmicutes-bacilli-bacillaceae | o | M | |||||||||
24 | NBRP-Pathogenic microbes | Bacteria and protozoa | o | o | o | ||||||||
25 | NBRP-General microbes (Riken BRC, JCM) | Bacteria | o |
Database name | Taxon | Wild/ inbred/ landrace | Mutants | Plasmid/ vector/ clones | Map (Physical or Linkage) | Gene (mutated genes/all genes) | Phenotype | SNPs | Blast service | Images | External DB (collaborating DB)[reference] | Featured contents/ services | |
1 | NBRP-Macaque | Vertebrata-mammalia-primate | o | o | |||||||||
2 | NBRP-Mouse(Riken BRC) | Vertebrata-mammalia- murinae-mus | o | o | o | P | M | o | o | o | o | MGI[3], (IMSR, JMSR;http://www.shigen.nig.ac.jp/mouse/jmsr/) | |
3 | NBRP-Rat | Mammalia-murinae-rattus | o | o | o | P | M | o | o | o | o | RGD[4], (JMSR) | graphical display of the phenotype data |
4 | NBRP-Xenopus | Vertebrata-amphibia | o | o | o | ||||||||
5 | NBRP-Zebrafish | Vertebrata-actinopterygii-cypriniformes-danio | o | M | o | o | ZFIN[5] | ||||||
6 | NBRP-Medaka | Vertebrata-actinopterygii-beloniformes-oryzias | o | o | o | P | M | o | o | o | atlas, phylogenetic tree | ||
7 | NBRP-Ciona | Ascidiacea-ciona | o | o | M | o | o | (Ghost,[6] CIPRO;http://cipro.ibio.jp/new/) | |||||
8 | NBRP-Drosophila (DGRC) | Arthropoda-insecta-diptera-drosophilidae | o | o | o | P | A | o | o | o | o | FlyBase[7] | |
9 | NBRP-Silkworm (SilkwormBase) | Arthropoda-insecta-lepidoptera-bombyx | o | L | M | o | o | laeva period time | |||||
10 | NBRP-C. elegans | Pseudocoelomata-nematoda | o | M | Wormbase[8] | ||||||||
11 | NBRP-Rice (Oryzabase) | Viridiplantae-poaceae-oryzeae | o | o | P,L | A | o | o | o | Gramene[9], IRRI; http://beta.irri.org/index.php/Home/Welcome/Frontpage.html | developmental stage | ||
12 | NBRP-Barley | Viridiplantae-poaceae-triticeae-hordeum | o | o | L | o | o | o | phenotype data | ||||
13 | NBRP-Wheat (KOMUGI) | Viridiplantae-poaceae-triticeae | o | o | o | L | A | o | o | o | (TriFLDB[10]) | gene catalogue | |
14 | NBRP-Arabidopsis (Riken BRC) | Viridiplantae-brassicales-arabidopsis | o | o | o | o | o | ||||||
15 | NBRP-Chrysanthemum | Viridiplantae-asterids-chrysanthemum | o | o | o | ||||||||
16 | NBRP-Morning glory | Viridiplantae-solanales-ipomoeeae | o | o | L | M | o | o | |||||
17 | NBRP-Lotus/Glycine (LegumeBase) | Fabales-fabaceae | o | o | o | L | M | o | o | (miyakogusa.jp[11], Soybean Full-length cDNA database[12]) | |||
18 | NBRP-Tomato | Viridiplantae-solanales-lycopersicon | o | (KafTom;http://www.pgb.kazusa.or.jp/kaftom/, MiBASE[13]) | |||||||||
19 | NBRP-Algae | 14 phyla (eukaryota and bacteria) | o | o | o | photograph, phylogenetic tree | |||||||
20 | NBRP-Yeast | Fungi-ascomycota | o | o | P | A | SGD[14], geneDB[15] | ||||||
21 | NBRP-Cellular slime mold | Mycetozoa-dictyostelliida | o | dictyBase[16] | |||||||||
22 | NBRP-Prokaryote E. coli | Bacteria-proteobacteria | o | o | P | A | o | PEC[17], EcoGene[18], EcoCyc[19], COG[20], NCBI[1], SwissProt[21], GTOP[22], KEGG[23], InterPro[24] | |||||
23 | NBRP-Prokaryote B. subtilis | Bacteria-firmicutes-bacilli-bacillaceae | o | M | |||||||||
24 | NBRP-Pathogenic microbes | Bacteria and protozoa | o | o | o | ||||||||
25 | NBRP-General microbes (Riken BRC, JCM) | Bacteria | o |
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