Table 1. Open in new tab Differences... | Oxford Academic

Table 1.

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Differences between IMEx and light curation

	Annotation	IMEX curation	LIGHT curation	Additional information/examples
Publication	Reference	√	√	PMID/D.O.I.
Interaction	Figure	√	√	Figure, Table
Interaction	Interaction type	√	√	Direct, physical, enzymatic reaction
Experiment	Detection method	√	√	Co-immunoprecipitation, two-hybrid
Experiment	Biosource	√		Taxid, cell type, tissue
Interactor	Author given name	√	√
Interactor	Cross reference	√	√	Uniprotkb, refseq
Interactor	Organism	√	√	Taxid
Interactor	Experimental role	√	√	Bait/prey
Interactor	Biological role	√		Enzyme, enzyme target western blot
Interactor	Participant identification	√
Interactor	Expression level	√		Endogenous/over-expressed purification
Interactor	Sample process	√
Interactor	Tag	√
Interactor	Binding site	√		Range, domain
Interactor	Modification	√		Phosphorylation, resulting/required position, amino-acids
Interactor	Mutation	√

	Annotation	IMEX curation	LIGHT curation	Additional information/examples
Publication	Reference	√	√	PMID/D.O.I.
Interaction	Figure	√	√	Figure, Table
Interaction	Interaction type	√	√	Direct, physical, enzymatic reaction
Experiment	Detection method	√	√	Co-immunoprecipitation, two-hybrid
Experiment	Biosource	√		Taxid, cell type, tissue
Interactor	Author given name	√	√
Interactor	Cross reference	√	√	Uniprotkb, refseq
Interactor	Organism	√	√	Taxid
Interactor	Experimental role	√	√	Bait/prey
Interactor	Biological role	√		Enzyme, enzyme target western blot
Interactor	Participant identification	√
Interactor	Expression level	√		Endogenous/over-expressed purification
Interactor	Sample process	√
Interactor	Tag	√
Interactor	Binding site	√		Range, domain
Interactor	Modification	√		Phosphorylation, resulting/required position, amino-acids
Interactor	Mutation	√

Table 1.

Open in new tab

Differences between IMEx and light curation

	Annotation	IMEX curation	LIGHT curation	Additional information/examples
Publication	Reference	√	√	PMID/D.O.I.
Interaction	Figure	√	√	Figure, Table
Interaction	Interaction type	√	√	Direct, physical, enzymatic reaction
Experiment	Detection method	√	√	Co-immunoprecipitation, two-hybrid
Experiment	Biosource	√		Taxid, cell type, tissue
Interactor	Author given name	√	√
Interactor	Cross reference	√	√	Uniprotkb, refseq
Interactor	Organism	√	√	Taxid
Interactor	Experimental role	√	√	Bait/prey
Interactor	Biological role	√		Enzyme, enzyme target western blot
Interactor	Participant identification	√
Interactor	Expression level	√		Endogenous/over-expressed purification
Interactor	Sample process	√
Interactor	Tag	√
Interactor	Binding site	√		Range, domain
Interactor	Modification	√		Phosphorylation, resulting/required position, amino-acids
Interactor	Mutation	√

	Annotation	IMEX curation	LIGHT curation	Additional information/examples
Publication	Reference	√	√	PMID/D.O.I.
Interaction	Figure	√	√	Figure, Table
Interaction	Interaction type	√	√	Direct, physical, enzymatic reaction
Experiment	Detection method	√	√	Co-immunoprecipitation, two-hybrid
Experiment	Biosource	√		Taxid, cell type, tissue
Interactor	Author given name	√	√
Interactor	Cross reference	√	√	Uniprotkb, refseq
Interactor	Organism	√	√	Taxid
Interactor	Experimental role	√	√	Bait/prey
Interactor	Biological role	√		Enzyme, enzyme target western blot
Interactor	Participant identification	√
Interactor	Expression level	√		Endogenous/over-expressed purification
Interactor	Sample process	√
Interactor	Tag	√
Interactor	Binding site	√		Range, domain
Interactor	Modification	√		Phosphorylation, resulting/required position, amino-acids
Interactor	Mutation	√