Table 4.

Repetitive DNA content RepeatMasker.

 Number of elementsSequence (%)
Retroelements2,940,83942.54
SINEs:1,524,27312.99
Penelope:6680
LINEs:933,20621.01
L2/CR1/Rex358,4523.71
R2/R4/NeSL4120
RTE/Bov-B13,0400.13
L1/CIN4561,06117.16
LTR_elements483,3608.54
Gypsy/DIRS120,3560.16
Retroviral452,7698.29
DNA_transposons404,2333.64
hobo-Activator276,6982.12
Tc1-IS630-Pogo115,0531.42
MULE-MuDR2,0360.03
PiggyBac1,9570.02
Tourist/Harbinger3640
Rolling-circles1,5620.01
Unclassified:48,3790.2
Total interspersed repeats46.39
 Number of elementsSequence (%)
Retroelements2,940,83942.54
SINEs:1,524,27312.99
Penelope:6680
LINEs:933,20621.01
L2/CR1/Rex358,4523.71
R2/R4/NeSL4120
RTE/Bov-B13,0400.13
L1/CIN4561,06117.16
LTR_elements483,3608.54
Gypsy/DIRS120,3560.16
Retroviral452,7698.29
DNA_transposons404,2333.64
hobo-Activator276,6982.12
Tc1-IS630-Pogo115,0531.42
MULE-MuDR2,0360.03
PiggyBac1,9570.02
Tourist/Harbinger3640
Rolling-circles1,5620.01
Unclassified:48,3790.2
Total interspersed repeats46.39
Table 4.

Repetitive DNA content RepeatMasker.

 Number of elementsSequence (%)
Retroelements2,940,83942.54
SINEs:1,524,27312.99
Penelope:6680
LINEs:933,20621.01
L2/CR1/Rex358,4523.71
R2/R4/NeSL4120
RTE/Bov-B13,0400.13
L1/CIN4561,06117.16
LTR_elements483,3608.54
Gypsy/DIRS120,3560.16
Retroviral452,7698.29
DNA_transposons404,2333.64
hobo-Activator276,6982.12
Tc1-IS630-Pogo115,0531.42
MULE-MuDR2,0360.03
PiggyBac1,9570.02
Tourist/Harbinger3640
Rolling-circles1,5620.01
Unclassified:48,3790.2
Total interspersed repeats46.39
 Number of elementsSequence (%)
Retroelements2,940,83942.54
SINEs:1,524,27312.99
Penelope:6680
LINEs:933,20621.01
L2/CR1/Rex358,4523.71
R2/R4/NeSL4120
RTE/Bov-B13,0400.13
L1/CIN4561,06117.16
LTR_elements483,3608.54
Gypsy/DIRS120,3560.16
Retroviral452,7698.29
DNA_transposons404,2333.64
hobo-Activator276,6982.12
Tc1-IS630-Pogo115,0531.42
MULE-MuDR2,0360.03
PiggyBac1,9570.02
Tourist/Harbinger3640
Rolling-circles1,5620.01
Unclassified:48,3790.2
Total interspersed repeats46.39
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