Table 1. Open in new tab Proteoform...

Table 1.

Proteoform identification and quantification results for simulated top-down HomMTM spectrum.

Protein	Size	# of peak1^a	# of peak2^a	# of mod2^b	Abundance	Running time (ms)
sp\|P0AB83\|END3_ECOLI	65	27	23	3	59% and 41%	2316.09
sp\|P0ABU0\|MENB_ECOLI	68	18	17	3	50% and 50%	1166.22
sp\|P77690\|ARNB_ECOLI	74	16	14	3	51% and 49%	1007.79
sp\|P0A948\|RIMJ_ECOLI	77	14	23	3	41% and 59%	957.40
sp\|P37626\|YHII_ECOLI	85	23	18	3	67% and 33%	1462.98
sp\|P0DP22\|YJIQ_ECOLI	88	9	15	3	56% and 43%	785.56
sp\|P0AF03\|MOG_ECOLI	91	18	24	3	58% and 42%	1752.53
sp\|P10441\|LPXB_ECOLI	98	19	20	3	70% and 30%	1725.71
sp\|P05458\|PTRA_ECOLI	103	13	13	3	12% and 88%	1004.92
sp\|P0AFS1\|LSRD_ECOLI	109	17	20	3	78% and 22%	1589.71

Protein	Size	# of peak1^a	# of peak2^a	# of mod2^b	Abundance	Running time (ms)
sp\|P0AB83\|END3_ECOLI	65	27	23	3	59% and 41%	2316.09
sp\|P0ABU0\|MENB_ECOLI	68	18	17	3	50% and 50%	1166.22
sp\|P77690\|ARNB_ECOLI	74	16	14	3	51% and 49%	1007.79
sp\|P0A948\|RIMJ_ECOLI	77	14	23	3	41% and 59%	957.40
sp\|P37626\|YHII_ECOLI	85	23	18	3	67% and 33%	1462.98
sp\|P0DP22\|YJIQ_ECOLI	88	9	15	3	56% and 43%	785.56
sp\|P0AF03\|MOG_ECOLI	91	18	24	3	58% and 42%	1752.53
sp\|P10441\|LPXB_ECOLI	98	19	20	3	70% and 30%	1725.71
sp\|P05458\|PTRA_ECOLI	103	13	13	3	12% and 88%	1004.92
sp\|P0AFS1\|LSRD_ECOLI	109	17	20	3	78% and 22%	1589.71

These two columns indicate the total numbers of matched peaks when aligning the mixture top-down HomMTM spectrum with the first and second proteoforms, respectively.

These two columns indicate the total numbers of modifications in the first and second proteoforms, respectively.

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