Summary of molecular evolution by spermatogenesis stage and male reproductive tissue.
. | . | Spermatogenesis cell typesa . | Male reproductive tissues . | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | All genes . | SO . | SG . | PL . | SC . | SD . | EL . | BD b . | BGb . | CGb . | DPb . | VPb . | SVb . | TSc . |
Number of genes | 10,610 | 57 | 438 | 227 | 95 | 228 | 186 | 43 | 131 | 1 | 72 | 36 | 7 | 378 |
Median dN/dS | 0.12 | 0.07* | 0.09* | 0.10* | 0.13 | 0.19* | 0.16* | 0.08 | 0.10* | 0.09 | 0.09 | 0.13 | 0.29* | 0.19* |
Percent of genes under positive selection | 17% | 18% | 17% | 19% | 17% | 14% | 16% | 19% | 18% | 0% | 26% | 14% | 14% | 13% |
Percent of testis-specific genes under positive selection | 13% | 0% | 0% | 5.6% | 9.1% | 12% | 17% | NA | NA | NA | NA | NA | NA | NA |
Percent of genes that are testis-specific | 3.6% | 3.5% | 1.4%* | 7.9%* | 23%* | 32%* | 25%* | NA | NA | NA | NA | NA | NA | NA |
. | . | Spermatogenesis cell typesa . | Male reproductive tissues . | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | All genes . | SO . | SG . | PL . | SC . | SD . | EL . | BD b . | BGb . | CGb . | DPb . | VPb . | SVb . | TSc . |
Number of genes | 10,610 | 57 | 438 | 227 | 95 | 228 | 186 | 43 | 131 | 1 | 72 | 36 | 7 | 378 |
Median dN/dS | 0.12 | 0.07* | 0.09* | 0.10* | 0.13 | 0.19* | 0.16* | 0.08 | 0.10* | 0.09 | 0.09 | 0.13 | 0.29* | 0.19* |
Percent of genes under positive selection | 17% | 18% | 17% | 19% | 17% | 14% | 16% | 19% | 18% | 0% | 26% | 14% | 14% | 13% |
Percent of testis-specific genes under positive selection | 13% | 0% | 0% | 5.6% | 9.1% | 12% | 17% | NA | NA | NA | NA | NA | NA | NA |
Percent of genes that are testis-specific | 3.6% | 3.5% | 1.4%* | 7.9%* | 23%* | 32%* | 25%* | NA | NA | NA | NA | NA | NA | NA |
aGreen et al. (2018).
bDean et al. (2009).
cChalmel et al. (2007).
(*) indicate significant differences from the average of all genes (FDR-corrected p < .05).
Note. SO = somatic; SG = spermatogonia; PL = pre-leptotene; SC = spermatocytes; SD = spermatids; EL = elongating; BD = bulbourethral diverticulum; BG = bulbourethral gland; CG = coagulating gland; DP = dorsolateral prostate; VP = ventral prostate; SV = seminal vesicle; TS = testis-specific.
Summary of molecular evolution by spermatogenesis stage and male reproductive tissue.
. | . | Spermatogenesis cell typesa . | Male reproductive tissues . | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | All genes . | SO . | SG . | PL . | SC . | SD . | EL . | BD b . | BGb . | CGb . | DPb . | VPb . | SVb . | TSc . |
Number of genes | 10,610 | 57 | 438 | 227 | 95 | 228 | 186 | 43 | 131 | 1 | 72 | 36 | 7 | 378 |
Median dN/dS | 0.12 | 0.07* | 0.09* | 0.10* | 0.13 | 0.19* | 0.16* | 0.08 | 0.10* | 0.09 | 0.09 | 0.13 | 0.29* | 0.19* |
Percent of genes under positive selection | 17% | 18% | 17% | 19% | 17% | 14% | 16% | 19% | 18% | 0% | 26% | 14% | 14% | 13% |
Percent of testis-specific genes under positive selection | 13% | 0% | 0% | 5.6% | 9.1% | 12% | 17% | NA | NA | NA | NA | NA | NA | NA |
Percent of genes that are testis-specific | 3.6% | 3.5% | 1.4%* | 7.9%* | 23%* | 32%* | 25%* | NA | NA | NA | NA | NA | NA | NA |
. | . | Spermatogenesis cell typesa . | Male reproductive tissues . | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
. | All genes . | SO . | SG . | PL . | SC . | SD . | EL . | BD b . | BGb . | CGb . | DPb . | VPb . | SVb . | TSc . |
Number of genes | 10,610 | 57 | 438 | 227 | 95 | 228 | 186 | 43 | 131 | 1 | 72 | 36 | 7 | 378 |
Median dN/dS | 0.12 | 0.07* | 0.09* | 0.10* | 0.13 | 0.19* | 0.16* | 0.08 | 0.10* | 0.09 | 0.09 | 0.13 | 0.29* | 0.19* |
Percent of genes under positive selection | 17% | 18% | 17% | 19% | 17% | 14% | 16% | 19% | 18% | 0% | 26% | 14% | 14% | 13% |
Percent of testis-specific genes under positive selection | 13% | 0% | 0% | 5.6% | 9.1% | 12% | 17% | NA | NA | NA | NA | NA | NA | NA |
Percent of genes that are testis-specific | 3.6% | 3.5% | 1.4%* | 7.9%* | 23%* | 32%* | 25%* | NA | NA | NA | NA | NA | NA | NA |
aGreen et al. (2018).
bDean et al. (2009).
cChalmel et al. (2007).
(*) indicate significant differences from the average of all genes (FDR-corrected p < .05).
Note. SO = somatic; SG = spermatogonia; PL = pre-leptotene; SC = spermatocytes; SD = spermatids; EL = elongating; BD = bulbourethral diverticulum; BG = bulbourethral gland; CG = coagulating gland; DP = dorsolateral prostate; VP = ventral prostate; SV = seminal vesicle; TS = testis-specific.
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