Table 1.

Overview of the number of proteins up- or downregulated in the comparisonsa

   Regulated
ComparisonTotal(Dis)-appearingQuantitativelySignificantlyQ_sense ≥2
CM0: up4903461445318
CM0: down470315155760
CE0: up19379114613
CE0: down39332073271
0AC: up3873394814nfc
0AC: down3302636719nfc
AM0: up24419054259
AM0: down47237597294
AE0: up32729631102
AE0: down23417658130
Sum3540269984132737
   Regulated
ComparisonTotal(Dis)-appearingQuantitativelySignificantlyQ_sense ≥2
CM0: up4903461445318
CM0: down470315155760
CE0: up19379114613
CE0: down39332073271
0AC: up3873394814nfc
0AC: down3302636719nfc
AM0: up24419054259
AM0: down47237597294
AE0: up32729631102
AE0: down23417658130
Sum3540269984132737

aThe total number of proteins upregulated/appearing or downregulated/disappearing is recorded in the second column. The first column lists the comparisons CM0 (CH34 metal-shocked to the control), CE0 (metal-starvation to the control), 0AC (AE104 to CH34 under nonchallenging conditions), AM0 (AE104 metal-shocked to the control), and AE0 (metal-starvation to the control). The proteins that disappeared or appeared and were not found in one of the conditions but in the other are listed in the third column. Quantitative results were defined as those with at least a single determination in each of the two conditions, with a two-fold ratio and a distance value >1. Significant results were those that came from at least two determinations in each of the two conditions, with a two-fold ratio and a distance value >1. The last column lists the significantly regulated proteins, which could be correlated with a significantly changed abundance of their sense RNA. The comparison between CH34 and AE104 control cells was not considered for correlation with the transcriptome data (nfc, not further considered).

Table 1.

Overview of the number of proteins up- or downregulated in the comparisonsa

   Regulated
ComparisonTotal(Dis)-appearingQuantitativelySignificantlyQ_sense ≥2
CM0: up4903461445318
CM0: down470315155760
CE0: up19379114613
CE0: down39332073271
0AC: up3873394814nfc
0AC: down3302636719nfc
AM0: up24419054259
AM0: down47237597294
AE0: up32729631102
AE0: down23417658130
Sum3540269984132737
   Regulated
ComparisonTotal(Dis)-appearingQuantitativelySignificantlyQ_sense ≥2
CM0: up4903461445318
CM0: down470315155760
CE0: up19379114613
CE0: down39332073271
0AC: up3873394814nfc
0AC: down3302636719nfc
AM0: up24419054259
AM0: down47237597294
AE0: up32729631102
AE0: down23417658130
Sum3540269984132737

aThe total number of proteins upregulated/appearing or downregulated/disappearing is recorded in the second column. The first column lists the comparisons CM0 (CH34 metal-shocked to the control), CE0 (metal-starvation to the control), 0AC (AE104 to CH34 under nonchallenging conditions), AM0 (AE104 metal-shocked to the control), and AE0 (metal-starvation to the control). The proteins that disappeared or appeared and were not found in one of the conditions but in the other are listed in the third column. Quantitative results were defined as those with at least a single determination in each of the two conditions, with a two-fold ratio and a distance value >1. Significant results were those that came from at least two determinations in each of the two conditions, with a two-fold ratio and a distance value >1. The last column lists the significantly regulated proteins, which could be correlated with a significantly changed abundance of their sense RNA. The comparison between CH34 and AE104 control cells was not considered for correlation with the transcriptome data (nfc, not further considered).

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