Table 2.
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Numbers of assembly issues detected by GCI, CRAQ, and T2T-polish pipeline for model species genomes.

SpeciesAssembly (version)GCI (no./length)CRAQ (no.)T2T-polish (no./length)
HumanCHM13 (v2)11/5.99 Mb32827/0.29 Mb
ChickenGGswu582/6.94 Mb16831829/44.67 Mb
ArabidopsisCol-CEN (v1.2)4/19.61 Kb2525/676.74 Kb
RiceMH63 (RS3)21/101.77 Kb328263/1733.06 Kb
SpeciesAssembly (version)GCI (no./length)CRAQ (no.)T2T-polish (no./length)
HumanCHM13 (v2)11/5.99 Mb32827/0.29 Mb
ChickenGGswu582/6.94 Mb16831829/44.67 Mb
ArabidopsisCol-CEN (v1.2)4/19.61 Kb2525/676.74 Kb
RiceMH63 (RS3)21/101.77 Kb328263/1733.06 Kb
Table 2.
Open in new tab

Numbers of assembly issues detected by GCI, CRAQ, and T2T-polish pipeline for model species genomes.

SpeciesAssembly (version)GCI (no./length)CRAQ (no.)T2T-polish (no./length)
HumanCHM13 (v2)11/5.99 Mb32827/0.29 Mb
ChickenGGswu582/6.94 Mb16831829/44.67 Mb
ArabidopsisCol-CEN (v1.2)4/19.61 Kb2525/676.74 Kb
RiceMH63 (RS3)21/101.77 Kb328263/1733.06 Kb
SpeciesAssembly (version)GCI (no./length)CRAQ (no.)T2T-polish (no./length)
HumanCHM13 (v2)11/5.99 Mb32827/0.29 Mb
ChickenGGswu582/6.94 Mb16831829/44.67 Mb
ArabidopsisCol-CEN (v1.2)4/19.61 Kb2525/676.74 Kb
RiceMH63 (RS3)21/101.77 Kb328263/1733.06 Kb
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