| Species . | Human . | Chicken . | Arabidopsis . | Rice . | ||||
|---|---|---|---|---|---|---|---|---|
| Assembly . | CHM13 (v.2.0) . | CN1.mat (v.0.9) . | CN1.pat (v.0.9) . | HG002.mat.cur.20211005 . | HG002.pat.cur.20211005 . | GGswu . | Col-CEN (v1.2) . | MH63 (RS3) . |
| Genome size (Mb) | 3055 | 3035 | 2875 | 3001 | 2852 | 1101 | 132 | 396 |
| Theoretical maximum contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 154.41 | 146.75 | 91.36 | 25.74 | 31.92 |
| Contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 62.88 | 84.93 | 91.36 | 25.74 | 31.92 |
| E-size/auN (Mb) | 156.45 | 156.10 | 156.39 | 73.54 | 77.20 | 93.34 | 26.98 | 33.99 |
| HiFi depth (×) | ∼58 | ∼44 | ∼44 | ∼83 | ∼83 | ∼51 | ∼90 | ∼39 |
| Curated contig N50 (Mb) (HiFi) | 102.83 | 73.85 | 66.46 | 29.22 | 40.18 | 19.25 | 14.28 | 24.81 |
| GCI (HiFi) | 41.83 | 22.84 | 22.47 | 7.26 | 11.94 | 7.99 | 30.75 | 49.89 |
| ONT depth (×) | ∼134 | ∼39 | ∼39 | ∼257 | ∼257 | ∼103 | ∼560 | NA |
| ≥ 100 kb (ultra-long) ONT depth (×) | ∼39 | ∼20 | ∼20 | ∼34 | ∼34 | ∼10 | ∼4 | NA |
| Curated contig N50 (Mb) (ONT) | 154.26 | 132.02 | 111.00 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (ONT) | 87.04 | 51.54 | 63.04 | 18.39 | 27.16 | 30.42 | 99.99 | NA |
| Curated contig N50 (Mb) (HiFi + ONT) | 154.26 | 137.88 | 134.86 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (HiFi+ONT) | 87.04 | 66.79 | 77.90 | 18.72 | 27.78 | 29.37 | 99.99 | NA |
| Species . | Human . | Chicken . | Arabidopsis . | Rice . | ||||
|---|---|---|---|---|---|---|---|---|
| Assembly . | CHM13 (v.2.0) . | CN1.mat (v.0.9) . | CN1.pat (v.0.9) . | HG002.mat.cur.20211005 . | HG002.pat.cur.20211005 . | GGswu . | Col-CEN (v1.2) . | MH63 (RS3) . |
| Genome size (Mb) | 3055 | 3035 | 2875 | 3001 | 2852 | 1101 | 132 | 396 |
| Theoretical maximum contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 154.41 | 146.75 | 91.36 | 25.74 | 31.92 |
| Contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 62.88 | 84.93 | 91.36 | 25.74 | 31.92 |
| E-size/auN (Mb) | 156.45 | 156.10 | 156.39 | 73.54 | 77.20 | 93.34 | 26.98 | 33.99 |
| HiFi depth (×) | ∼58 | ∼44 | ∼44 | ∼83 | ∼83 | ∼51 | ∼90 | ∼39 |
| Curated contig N50 (Mb) (HiFi) | 102.83 | 73.85 | 66.46 | 29.22 | 40.18 | 19.25 | 14.28 | 24.81 |
| GCI (HiFi) | 41.83 | 22.84 | 22.47 | 7.26 | 11.94 | 7.99 | 30.75 | 49.89 |
| ONT depth (×) | ∼134 | ∼39 | ∼39 | ∼257 | ∼257 | ∼103 | ∼560 | NA |
| ≥ 100 kb (ultra-long) ONT depth (×) | ∼39 | ∼20 | ∼20 | ∼34 | ∼34 | ∼10 | ∼4 | NA |
| Curated contig N50 (Mb) (ONT) | 154.26 | 132.02 | 111.00 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (ONT) | 87.04 | 51.54 | 63.04 | 18.39 | 27.16 | 30.42 | 99.99 | NA |
| Curated contig N50 (Mb) (HiFi + ONT) | 154.26 | 137.88 | 134.86 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (HiFi+ONT) | 87.04 | 66.79 | 77.90 | 18.72 | 27.78 | 29.37 | 99.99 | NA |
| Species . | Human . | Chicken . | Arabidopsis . | Rice . | ||||
|---|---|---|---|---|---|---|---|---|
| Assembly . | CHM13 (v.2.0) . | CN1.mat (v.0.9) . | CN1.pat (v.0.9) . | HG002.mat.cur.20211005 . | HG002.pat.cur.20211005 . | GGswu . | Col-CEN (v1.2) . | MH63 (RS3) . |
| Genome size (Mb) | 3055 | 3035 | 2875 | 3001 | 2852 | 1101 | 132 | 396 |
| Theoretical maximum contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 154.41 | 146.75 | 91.36 | 25.74 | 31.92 |
| Contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 62.88 | 84.93 | 91.36 | 25.74 | 31.92 |
| E-size/auN (Mb) | 156.45 | 156.10 | 156.39 | 73.54 | 77.20 | 93.34 | 26.98 | 33.99 |
| HiFi depth (×) | ∼58 | ∼44 | ∼44 | ∼83 | ∼83 | ∼51 | ∼90 | ∼39 |
| Curated contig N50 (Mb) (HiFi) | 102.83 | 73.85 | 66.46 | 29.22 | 40.18 | 19.25 | 14.28 | 24.81 |
| GCI (HiFi) | 41.83 | 22.84 | 22.47 | 7.26 | 11.94 | 7.99 | 30.75 | 49.89 |
| ONT depth (×) | ∼134 | ∼39 | ∼39 | ∼257 | ∼257 | ∼103 | ∼560 | NA |
| ≥ 100 kb (ultra-long) ONT depth (×) | ∼39 | ∼20 | ∼20 | ∼34 | ∼34 | ∼10 | ∼4 | NA |
| Curated contig N50 (Mb) (ONT) | 154.26 | 132.02 | 111.00 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (ONT) | 87.04 | 51.54 | 63.04 | 18.39 | 27.16 | 30.42 | 99.99 | NA |
| Curated contig N50 (Mb) (HiFi + ONT) | 154.26 | 137.88 | 134.86 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (HiFi+ONT) | 87.04 | 66.79 | 77.90 | 18.72 | 27.78 | 29.37 | 99.99 | NA |
| Species . | Human . | Chicken . | Arabidopsis . | Rice . | ||||
|---|---|---|---|---|---|---|---|---|
| Assembly . | CHM13 (v.2.0) . | CN1.mat (v.0.9) . | CN1.pat (v.0.9) . | HG002.mat.cur.20211005 . | HG002.pat.cur.20211005 . | GGswu . | Col-CEN (v1.2) . | MH63 (RS3) . |
| Genome size (Mb) | 3055 | 3035 | 2875 | 3001 | 2852 | 1101 | 132 | 396 |
| Theoretical maximum contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 154.41 | 146.75 | 91.36 | 25.74 | 31.92 |
| Contig N50 (Mb) | 154.26 | 157.37 | 145.80 | 62.88 | 84.93 | 91.36 | 25.74 | 31.92 |
| E-size/auN (Mb) | 156.45 | 156.10 | 156.39 | 73.54 | 77.20 | 93.34 | 26.98 | 33.99 |
| HiFi depth (×) | ∼58 | ∼44 | ∼44 | ∼83 | ∼83 | ∼51 | ∼90 | ∼39 |
| Curated contig N50 (Mb) (HiFi) | 102.83 | 73.85 | 66.46 | 29.22 | 40.18 | 19.25 | 14.28 | 24.81 |
| GCI (HiFi) | 41.83 | 22.84 | 22.47 | 7.26 | 11.94 | 7.99 | 30.75 | 49.89 |
| ONT depth (×) | ∼134 | ∼39 | ∼39 | ∼257 | ∼257 | ∼103 | ∼560 | NA |
| ≥ 100 kb (ultra-long) ONT depth (×) | ∼39 | ∼20 | ∼20 | ∼34 | ∼34 | ∼10 | ∼4 | NA |
| Curated contig N50 (Mb) (ONT) | 154.26 | 132.02 | 111.00 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (ONT) | 87.04 | 51.54 | 63.04 | 18.39 | 27.16 | 30.42 | 99.99 | NA |
| Curated contig N50 (Mb) (HiFi + ONT) | 154.26 | 137.88 | 134.86 | 58.82 | 81.56 | 73.41 | 25.74 | NA |
| GCI (HiFi+ONT) | 87.04 | 66.79 | 77.90 | 18.72 | 27.78 | 29.37 | 99.99 | NA |
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