Table 2.
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Pristionchus pacificus histone acetyltransferases and deacetylases.

FamilyWriter/eraser (C. elegans, H. sapiens )Known modifications (present in P. pacificus)P. pacificus ortholog
HATpcaf-1, KAT2A/GCN5H3K9/14acppa_stranded_DN27027_c0_g1_i1
HATcbp-1, cbp-2, cbp-3, CREBBP/P300H3K27ac, H3K9/14/18/23ac, H4K5/8/12/16acPPA40038, Contig11-snapTAU.521
HATmys-1, KAT5H3K14ac, H4K5/8/12/16acPPA17126
HATmys-2, mys-4, KAT7H3K14ac, H4K5/8/12acPPA37093, ppa_stranded_DN30216_c0_g1_i2, ppa_stranded_DN30317_c2_g1_i3
HAThat-1, HAT1H4K5/12acppa_stranded_DN13768_c0_g2_i1
HATeco-1, ESCO-1–ppa_stranded_DN25124_c0_g2_i1
HATtaf-1, TAF1–ppa_stranded_DN29787_c1_g1_i2
HATelpc-3, ELP3–ppa_stranded_DN31509_c0_g3_i1
HATNATD1–PPA25554
HATNAA60–ppa_stranded_DN16451_c0_g1_i2
HATSAT1, SAT2–PPA04417, PPA05542, PPA29290, ppa_stranded_DN23261_c0_g1_i1, ppa_stranded_DN26404_c0_g1_i1
HATNAA50–PPA22455
HATNAA40–PPA34398, ppa_stranded_DN20546_c0_g2_i1
HAThda-1, HDA1–PPA17629, isopolya.1742.2
HATmys-3/lsy-12–ppa_stranded_DN30317_c2_g1_i3
HDAChda-2, HDA2–ppa_stranded_DN28176_c1_g1_i1
HDAChda-3, HDA3–ppa_stranded_DN28546_c0_g1_i2
HDAChda-4, HDA4–PPA00049
HDAChda-10, HDA10–PPA35591
HDAChda-6, HDA6–ppa_stranded_DN30152_c3_g3_i1
HDAChda-5, HDA5–PPA35416
HDACsir-2.2, sir-2.3–PPA17520
HDACsir-2.4–PPA06876
HDACSIR7H3K18acPPA34358
HDACsir-2.1H4K16acPPA18927, PPA35522
HDAChda-11, HDA11–PPA03988
FamilyWriter/eraser (C. elegans, H. sapiens )Known modifications (present in P. pacificus)P. pacificus ortholog
HATpcaf-1, KAT2A/GCN5H3K9/14acppa_stranded_DN27027_c0_g1_i1
HATcbp-1, cbp-2, cbp-3, CREBBP/P300H3K27ac, H3K9/14/18/23ac, H4K5/8/12/16acPPA40038, Contig11-snapTAU.521
HATmys-1, KAT5H3K14ac, H4K5/8/12/16acPPA17126
HATmys-2, mys-4, KAT7H3K14ac, H4K5/8/12acPPA37093, ppa_stranded_DN30216_c0_g1_i2, ppa_stranded_DN30317_c2_g1_i3
HAThat-1, HAT1H4K5/12acppa_stranded_DN13768_c0_g2_i1
HATeco-1, ESCO-1–ppa_stranded_DN25124_c0_g2_i1
HATtaf-1, TAF1–ppa_stranded_DN29787_c1_g1_i2
HATelpc-3, ELP3–ppa_stranded_DN31509_c0_g3_i1
HATNATD1–PPA25554
HATNAA60–ppa_stranded_DN16451_c0_g1_i2
HATSAT1, SAT2–PPA04417, PPA05542, PPA29290, ppa_stranded_DN23261_c0_g1_i1, ppa_stranded_DN26404_c0_g1_i1
HATNAA50–PPA22455
HATNAA40–PPA34398, ppa_stranded_DN20546_c0_g2_i1
HAThda-1, HDA1–PPA17629, isopolya.1742.2
HATmys-3/lsy-12–ppa_stranded_DN30317_c2_g1_i3
HDAChda-2, HDA2–ppa_stranded_DN28176_c1_g1_i1
HDAChda-3, HDA3–ppa_stranded_DN28546_c0_g1_i2
HDAChda-4, HDA4–PPA00049
HDAChda-10, HDA10–PPA35591
HDAChda-6, HDA6–ppa_stranded_DN30152_c3_g3_i1
HDAChda-5, HDA5–PPA35416
HDACsir-2.2, sir-2.3–PPA17520
HDACsir-2.4–PPA06876
HDACSIR7H3K18acPPA34358
HDACsir-2.1H4K16acPPA18927, PPA35522
HDAChda-11, HDA11–PPA03988

Pristionchus pacificus orthologs of known C. elegans and human histone acetyltransferases (HATs) and histone deacetylases (HDACs), identified from orthogroup phylogenetic analysis. C. elegans genes are indicated in bold.

Table 2.
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Pristionchus pacificus histone acetyltransferases and deacetylases.

FamilyWriter/eraser (C. elegans, H. sapiens )Known modifications (present in P. pacificus)P. pacificus ortholog
HATpcaf-1, KAT2A/GCN5H3K9/14acppa_stranded_DN27027_c0_g1_i1
HATcbp-1, cbp-2, cbp-3, CREBBP/P300H3K27ac, H3K9/14/18/23ac, H4K5/8/12/16acPPA40038, Contig11-snapTAU.521
HATmys-1, KAT5H3K14ac, H4K5/8/12/16acPPA17126
HATmys-2, mys-4, KAT7H3K14ac, H4K5/8/12acPPA37093, ppa_stranded_DN30216_c0_g1_i2, ppa_stranded_DN30317_c2_g1_i3
HAThat-1, HAT1H4K5/12acppa_stranded_DN13768_c0_g2_i1
HATeco-1, ESCO-1–ppa_stranded_DN25124_c0_g2_i1
HATtaf-1, TAF1–ppa_stranded_DN29787_c1_g1_i2
HATelpc-3, ELP3–ppa_stranded_DN31509_c0_g3_i1
HATNATD1–PPA25554
HATNAA60–ppa_stranded_DN16451_c0_g1_i2
HATSAT1, SAT2–PPA04417, PPA05542, PPA29290, ppa_stranded_DN23261_c0_g1_i1, ppa_stranded_DN26404_c0_g1_i1
HATNAA50–PPA22455
HATNAA40–PPA34398, ppa_stranded_DN20546_c0_g2_i1
HAThda-1, HDA1–PPA17629, isopolya.1742.2
HATmys-3/lsy-12–ppa_stranded_DN30317_c2_g1_i3
HDAChda-2, HDA2–ppa_stranded_DN28176_c1_g1_i1
HDAChda-3, HDA3–ppa_stranded_DN28546_c0_g1_i2
HDAChda-4, HDA4–PPA00049
HDAChda-10, HDA10–PPA35591
HDAChda-6, HDA6–ppa_stranded_DN30152_c3_g3_i1
HDAChda-5, HDA5–PPA35416
HDACsir-2.2, sir-2.3–PPA17520
HDACsir-2.4–PPA06876
HDACSIR7H3K18acPPA34358
HDACsir-2.1H4K16acPPA18927, PPA35522
HDAChda-11, HDA11–PPA03988
FamilyWriter/eraser (C. elegans, H. sapiens )Known modifications (present in P. pacificus)P. pacificus ortholog
HATpcaf-1, KAT2A/GCN5H3K9/14acppa_stranded_DN27027_c0_g1_i1
HATcbp-1, cbp-2, cbp-3, CREBBP/P300H3K27ac, H3K9/14/18/23ac, H4K5/8/12/16acPPA40038, Contig11-snapTAU.521
HATmys-1, KAT5H3K14ac, H4K5/8/12/16acPPA17126
HATmys-2, mys-4, KAT7H3K14ac, H4K5/8/12acPPA37093, ppa_stranded_DN30216_c0_g1_i2, ppa_stranded_DN30317_c2_g1_i3
HAThat-1, HAT1H4K5/12acppa_stranded_DN13768_c0_g2_i1
HATeco-1, ESCO-1–ppa_stranded_DN25124_c0_g2_i1
HATtaf-1, TAF1–ppa_stranded_DN29787_c1_g1_i2
HATelpc-3, ELP3–ppa_stranded_DN31509_c0_g3_i1
HATNATD1–PPA25554
HATNAA60–ppa_stranded_DN16451_c0_g1_i2
HATSAT1, SAT2–PPA04417, PPA05542, PPA29290, ppa_stranded_DN23261_c0_g1_i1, ppa_stranded_DN26404_c0_g1_i1
HATNAA50–PPA22455
HATNAA40–PPA34398, ppa_stranded_DN20546_c0_g2_i1
HAThda-1, HDA1–PPA17629, isopolya.1742.2
HATmys-3/lsy-12–ppa_stranded_DN30317_c2_g1_i3
HDAChda-2, HDA2–ppa_stranded_DN28176_c1_g1_i1
HDAChda-3, HDA3–ppa_stranded_DN28546_c0_g1_i2
HDAChda-4, HDA4–PPA00049
HDAChda-10, HDA10–PPA35591
HDAChda-6, HDA6–ppa_stranded_DN30152_c3_g3_i1
HDAChda-5, HDA5–PPA35416
HDACsir-2.2, sir-2.3–PPA17520
HDACsir-2.4–PPA06876
HDACSIR7H3K18acPPA34358
HDACsir-2.1H4K16acPPA18927, PPA35522
HDAChda-11, HDA11–PPA03988

Pristionchus pacificus orthologs of known C. elegans and human histone acetyltransferases (HATs) and histone deacetylases (HDACs), identified from orthogroup phylogenetic analysis. C. elegans genes are indicated in bold.

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