Table 1. Open in new tab Summary of...

Table 1.

Summary of datasets.

Platform	Organism	Sample ID	Raw matrix (cell, gene)	Raw density	Filter matrix (cell, gene)	Filter density	No. of imputed entries
10xVisium	Human dorsolateral prefrontal cortex (DLPFC)	151507	4226, 33 538	0.042	4117, 4028	0.261	437 240
		151508	4384, 33 538	0.036	4148, 3342	0.258	358 184
		151509	4789, 33 538	0.043	4700, 4188	0.258	508 186
		151510	4643, 33 538	0.041	4547, 3908	0.259	461 112
		151669	3661, 33 538	0.054	3617, 5246	0.277	525 930
		151670	3498, 33 538	0.050	3433, 4909	0.272	457 770
		151671	4110, 33 538	0.055	3988, 5539	0.278	615 111
		151672	4015, 33 538	0.052	3809, 5273	0.279	561 166
		151673	3639, 33 538	0.066	3628, 6538	0.286	677 473
		151674	3673, 33 538	0.080	3668, 7796	0.305	871 032
		151675	3592, 33 538	0.054	3565, 5454	0.267	518 515
		151676	3460, 33 538	0.058	3449, 5784	0.274	545 920
Stereoseq	Mouse	/	19 109, 14 376	0.024	4036, 1581	0.193	123 444
SlideseqV2	Mouse	/	20 139, 11 750	0.031	5161, 2611	0.217	292 418

Platform	Organism	Sample ID	Raw matrix (cell, gene)	Raw density	Filter matrix (cell, gene)	Filter density	No. of imputed entries
10xVisium	Human dorsolateral prefrontal cortex (DLPFC)	151507	4226, 33 538	0.042	4117, 4028	0.261	437 240
		151508	4384, 33 538	0.036	4148, 3342	0.258	358 184
		151509	4789, 33 538	0.043	4700, 4188	0.258	508 186
		151510	4643, 33 538	0.041	4547, 3908	0.259	461 112
		151669	3661, 33 538	0.054	3617, 5246	0.277	525 930
		151670	3498, 33 538	0.050	3433, 4909	0.272	457 770
		151671	4110, 33 538	0.055	3988, 5539	0.278	615 111
		151672	4015, 33 538	0.052	3809, 5273	0.279	561 166
		151673	3639, 33 538	0.066	3628, 6538	0.286	677 473
		151674	3673, 33 538	0.080	3668, 7796	0.305	871 032
		151675	3592, 33 538	0.054	3565, 5454	0.267	518 515
		151676	3460, 33 538	0.058	3449, 5784	0.274	545 920
Stereoseq	Mouse	/	19 109, 14 376	0.024	4036, 1581	0.193	123 444
SlideseqV2	Mouse	/	20 139, 11 750	0.031	5161, 2611	0.217	292 418