Number of samples for which at least one point was timed, out of a total of 156 BRCA and 102 OV samples featuring a gain of some sort.a
. | Mutations . | AmplificationTimeR . | MutationTimeR . | cancerTiming . | |||
---|---|---|---|---|---|---|---|
. | . | BRCA . | OV . | BRCA . | OV . | BRCA . | OV . |
1 | All | 107 | 78 | 85 | 59 | 39 | 27 |
2 | SBS | 86 | 54 | 75 | 52 | 29 | 19 |
3 | C > T | 78 | 43 | 70 | 49 | 26 | 15 |
. | Mutations . | AmplificationTimeR . | MutationTimeR . | cancerTiming . | |||
---|---|---|---|---|---|---|---|
. | . | BRCA . | OV . | BRCA . | OV . | BRCA . | OV . |
1 | All | 107 | 78 | 85 | 59 | 39 | 27 |
2 | SBS | 86 | 54 | 75 | 52 | 29 | 19 |
3 | C > T | 78 | 43 | 70 | 49 | 26 | 15 |
Boldface indicates the highest number of samples timed for each combination of tools, tumour types, and mutation types. “SBS” indicates timing using only mutations attributed to mutational signatures SBS1 and SBS5. “C > T” indicates timing using only C > T mutations at CpG sites. “All” indicates the use of all available mutations for timing.
Number of samples for which at least one point was timed, out of a total of 156 BRCA and 102 OV samples featuring a gain of some sort.a
. | Mutations . | AmplificationTimeR . | MutationTimeR . | cancerTiming . | |||
---|---|---|---|---|---|---|---|
. | . | BRCA . | OV . | BRCA . | OV . | BRCA . | OV . |
1 | All | 107 | 78 | 85 | 59 | 39 | 27 |
2 | SBS | 86 | 54 | 75 | 52 | 29 | 19 |
3 | C > T | 78 | 43 | 70 | 49 | 26 | 15 |
. | Mutations . | AmplificationTimeR . | MutationTimeR . | cancerTiming . | |||
---|---|---|---|---|---|---|---|
. | . | BRCA . | OV . | BRCA . | OV . | BRCA . | OV . |
1 | All | 107 | 78 | 85 | 59 | 39 | 27 |
2 | SBS | 86 | 54 | 75 | 52 | 29 | 19 |
3 | C > T | 78 | 43 | 70 | 49 | 26 | 15 |
Boldface indicates the highest number of samples timed for each combination of tools, tumour types, and mutation types. “SBS” indicates timing using only mutations attributed to mutational signatures SBS1 and SBS5. “C > T” indicates timing using only C > T mutations at CpG sites. “All” indicates the use of all available mutations for timing.
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