Assembly . | WT05_contig . | WT05_scaffold . | NSL4733_scaffold . |
---|---|---|---|
Number of sequences | 301 | 146 | 25,828 |
Number of sequences (≥ 50,000 bp) | 293 | 37 | 891 |
Number of genes | – | 30,066 | 31,221 |
Number of mRNAs | – | 43,272 | 31,221 |
Total length (bp) | 315,948,298 | 316,113,298 | 350,631,014 |
Largest contig (bp) | 27,252,567 | 36,693,184 | 4,693,355 |
N50 length (bp) | 8,963,070 | 31,927,722 | 496,528 |
GC content (%) | 33.05 | 33.05 | 33.84 |
Repeat sequence content (%) | – | 52.95 | 53.35 |
L50 | 12 | 5 | 167 |
Number of N's per 100 kb | – | 52.20 | 3896.61 |
Assembly . | WT05_contig . | WT05_scaffold . | NSL4733_scaffold . |
---|---|---|---|
Number of sequences | 301 | 146 | 25,828 |
Number of sequences (≥ 50,000 bp) | 293 | 37 | 891 |
Number of genes | – | 30,066 | 31,221 |
Number of mRNAs | – | 43,272 | 31,221 |
Total length (bp) | 315,948,298 | 316,113,298 | 350,631,014 |
Largest contig (bp) | 27,252,567 | 36,693,184 | 4,693,355 |
N50 length (bp) | 8,963,070 | 31,927,722 | 496,528 |
GC content (%) | 33.05 | 33.05 | 33.84 |
Repeat sequence content (%) | – | 52.95 | 53.35 |
L50 | 12 | 5 | 167 |
Number of N's per 100 kb | – | 52.20 | 3896.61 |
Note: “–” indicates unannotated.
Assembly . | WT05_contig . | WT05_scaffold . | NSL4733_scaffold . |
---|---|---|---|
Number of sequences | 301 | 146 | 25,828 |
Number of sequences (≥ 50,000 bp) | 293 | 37 | 891 |
Number of genes | – | 30,066 | 31,221 |
Number of mRNAs | – | 43,272 | 31,221 |
Total length (bp) | 315,948,298 | 316,113,298 | 350,631,014 |
Largest contig (bp) | 27,252,567 | 36,693,184 | 4,693,355 |
N50 length (bp) | 8,963,070 | 31,927,722 | 496,528 |
GC content (%) | 33.05 | 33.05 | 33.84 |
Repeat sequence content (%) | – | 52.95 | 53.35 |
L50 | 12 | 5 | 167 |
Number of N's per 100 kb | – | 52.20 | 3896.61 |
Assembly . | WT05_contig . | WT05_scaffold . | NSL4733_scaffold . |
---|---|---|---|
Number of sequences | 301 | 146 | 25,828 |
Number of sequences (≥ 50,000 bp) | 293 | 37 | 891 |
Number of genes | – | 30,066 | 31,221 |
Number of mRNAs | – | 43,272 | 31,221 |
Total length (bp) | 315,948,298 | 316,113,298 | 350,631,014 |
Largest contig (bp) | 27,252,567 | 36,693,184 | 4,693,355 |
N50 length (bp) | 8,963,070 | 31,927,722 | 496,528 |
GC content (%) | 33.05 | 33.05 | 33.84 |
Repeat sequence content (%) | – | 52.95 | 53.35 |
L50 | 12 | 5 | 167 |
Number of N's per 100 kb | – | 52.20 | 3896.61 |
Note: “–” indicates unannotated.
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